RNA–Protein interactions for RNA: ENST00000589781.1

APOC1-205, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 273 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-205ENST00000589781 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.8□□□□□ -0.52
APOC1-205ENST00000589781 DHX36Q9H2U1 1008 aaKnown RBP11.8□□□□□ -0.52
APOC1-205ENST00000589781 ADGRA2Q96PE1 1338 aa11.8□□□□□ -0.52
APOC1-205ENST00000589781 hCG_1642624A0A1W2PR95 340 aa11.79□□□□□ -0.52
APOC1-205ENST00000589781 MPHOSPH10O00566 681 aaKnown RBP11.79□□□□□ -0.52
APOC1-205ENST00000589781 CTGFP29279 349 aa11.79□□□□□ -0.52
APOC1-205ENST00000589781 KRT85P78386 507 aa11.79□□□□□ -0.52
APOC1-205ENST00000589781 TPRNQ4KMQ1 711 aa11.79□□□□□ -0.52
APOC1-205ENST00000589781 LRRC47Q8N1G4 583 aaKnown RBP11.79□□□□□ -0.52
APOC1-205ENST00000589781 FBXO18Q8NFZ0 1043 aa11.79□□□□□ -0.52
APOC1-205ENST00000589781 HOOK2Q96ED9 719 aa11.79□□□□□ -0.52
APOC1-205ENST00000589781 TRIM34Q9BYJ4 488 aa11.79□□□□□ -0.52
APOC1-205ENST00000589781 GZF1Q9H116 711 aaPredicted RBP11.79□□□□□ -0.52
APOC1-205ENST00000589781 AFG3L2Q9Y4W6 797 aa11.79□□□□□ -0.52
APOC1-205ENST00000589781 DDX49Q9Y6V7 483 aaKnown RBP11.79□□□□□ -0.52
APOC1-205ENST00000589781 ZHX2Q9Y6X8 837 aa11.79□□□□□ -0.52
APOC1-205ENST00000589781 PHIPQ8WWQ0 1821 aa11.79□□□□□ -0.52
APOC1-205ENST00000589781 CTNND1O60716 968 aaKnown RBP11.78□□□□□ -0.52
APOC1-205ENST00000589781 GADD45BO75293 160 aaPredicted RBP11.78□□□□□ -0.52
APOC1-205ENST00000589781 GDF11O95390 407 aa11.78□□□□□ -0.52
APOC1-205ENST00000589781 DEXIO95424 95 aa11.78□□□□□ -0.52
APOC1-205ENST00000589781 TOP1P11387 765 aaKnown RBP11.78□□□□□ -0.52
APOC1-205ENST00000589781 CAP2P40123 477 aa11.78□□□□□ -0.52
APOC1-205ENST00000589781 STAG2Q8N3U4 1231 aa11.78□□□□□ -0.52
APOC1-205ENST00000589781 SRBD1Q8N5C6 995 aaKnown RBP11.78□□□□□ -0.52
APOC1-205ENST00000589781 GPT2Q8TD30 523 aa11.78□□□□□ -0.52
APOC1-205ENST00000589781 WASF1Q92558 559 aa11.78□□□□□ -0.52
APOC1-205ENST00000589781 RNF26Q9BY78 433 aaPredicted RBP11.78□□□□□ -0.52
APOC1-205ENST00000589781 FTOQ9C0B1 505 aaKnown RBP eCLIP11.78□□□□□ -0.52
APOC1-205ENST00000589781 ZSCAN16Q9H4T2 348 aaPredicted RBP11.78□□□□□ -0.52
APOC1-205ENST00000589781 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.78□□□□□ -0.52
APOC1-205ENST00000589781 A0A0G2JLL6 359 aaPredicted RBP11.77□□□□□ -0.53
APOC1-205ENST00000589781 FKTNO75072 461 aa11.77□□□□□ -0.53
APOC1-205ENST00000589781 ALDH1A1P00352 501 aa11.77□□□□□ -0.53
APOC1-205ENST00000589781 CETPP11597 493 aa11.77□□□□□ -0.53
APOC1-205ENST00000589781 KIF5BP33176 963 aa11.77□□□□□ -0.53
APOC1-205ENST00000589781 NOVP48745 357 aa11.77□□□□□ -0.53
APOC1-205ENST00000589781 AKAP17AQ02040 695 aaKnown RBP11.77□□□□□ -0.53
APOC1-205ENST00000589781 SNAPC2Q13487 334 aa11.77□□□□□ -0.53
APOC1-205ENST00000589781 TRIM29Q14134 588 aa11.77□□□□□ -0.53
APOC1-205ENST00000589781 PPP2R5BQ15173 497 aa11.77□□□□□ -0.53
APOC1-205ENST00000589781 PKN1Q16512 942 aa11.77□□□□□ -0.53
APOC1-205ENST00000589781 SLC35G1Q2M3R5 365 aa11.77□□□□□ -0.53
APOC1-205ENST00000589781 KLHL40Q2TBA0 621 aa11.77□□□□□ -0.53
APOC1-205ENST00000589781 SKOR2Q2VWA4 1001 aaPredicted RBP11.77□□□□□ -0.53
APOC1-205ENST00000589781 PRRT2Q7Z6L0 340 aaPredicted RBP11.77□□□□□ -0.53
APOC1-205ENST00000589781 CTU1Q7Z7A3 348 aaKnown RBP11.77□□□□□ -0.53
APOC1-205ENST00000589781 PIBF1Q8WXW3 757 aa11.77□□□□□ -0.53
APOC1-205ENST00000589781 SHISA4Q96DD7 197 aa11.77□□□□□ -0.53
APOC1-205ENST00000589781 MTMR4Q9NYA4 1195 aa11.77□□□□□ -0.53
APOC1-205ENST00000589781 RBM27Q9P2N5 1060 aaKnown RBP11.77□□□□□ -0.53
APOC1-205ENST00000589781 TFIP11Q9UBB9 837 aaKnown RBP11.77□□□□□ -0.53
APOC1-205ENST00000589781 PI4KBQ9UBF8 816 aa11.77□□□□□ -0.53
APOC1-205ENST00000589781 MAD2L2Q9UI95 211 aa11.77□□□□□ -0.53
APOC1-205ENST00000589781 KCNJ14Q9UNX9 436 aa11.77□□□□□ -0.53
APOC1-205ENST00000589781 CXCL11O14625 94 aa11.76□□□□□ -0.53
APOC1-205ENST00000589781 PRPF3O43395 683 aaKnown RBP11.76□□□□□ -0.53
APOC1-205ENST00000589781 GOLGA8HP0CJ92 632 aa11.76□□□□□ -0.53
APOC1-205ENST00000589781 ATP2B2Q01814 1243 aa11.76□□□□□ -0.53
APOC1-205ENST00000589781 CSPP1Q1MSJ5 1256 aa11.76□□□□□ -0.53
APOC1-205ENST00000589781 POTEEQ6S8J3 1075 aa11.76□□□□□ -0.53
APOC1-205ENST00000589781 ANKRD23Q86SG2 305 aa11.76□□□□□ -0.53
APOC1-205ENST00000589781 CD99L2Q8TCZ2 262 aa11.76□□□□□ -0.53
APOC1-205ENST00000589781 CCDC17Q96LX7 622 aa11.76□□□□□ -0.53
APOC1-205ENST00000589781 USP28Q96RU2 1077 aa11.76□□□□□ -0.53
APOC1-205ENST00000589781 ARHGAP39Q9C0H5 1083 aa11.76□□□□□ -0.53
APOC1-205ENST00000589781 ZSWIM8A7E2V4 1837 aa11.76□□□□□ -0.53
APOC1-205ENST00000589781 DOCK1Q14185 1865 aa11.75□□□□□ -0.53
APOC1-205ENST00000589781 PDHXO00330 501 aa11.75□□□□□ -0.53
APOC1-205ENST00000589781 TTLL1O95922 423 aa11.75□□□□□ -0.53
APOC1-205ENST00000589781 MBD3O95983 291 aa11.75□□□□□ -0.53
APOC1-205ENST00000589781 MMP1P03956 469 aa11.75□□□□□ -0.53
APOC1-205ENST00000589781 CYP2C8P10632 490 aa11.75□□□□□ -0.53
APOC1-205ENST00000589781 CEBPZQ03701 1054 aaKnown RBP11.75□□□□□ -0.53
APOC1-205ENST00000589781 GNL2Q13823 731 aaKnown RBP11.75□□□□□ -0.53
APOC1-205ENST00000589781 TAF1CQ15572 869 aaPredicted RBP11.75□□□□□ -0.53
APOC1-205ENST00000589781 CERKLQ49MI3 558 aaPredicted RBP11.75□□□□□ -0.53
APOC1-205ENST00000589781 TREML2Q5T2D2 321 aa11.75□□□□□ -0.53
APOC1-205ENST00000589781 MYSM1Q5VVJ2 828 aa11.75□□□□□ -0.53
APOC1-205ENST00000589781 CAVIN1Q6NZI2 390 aaKnown RBP11.75□□□□□ -0.53
APOC1-205ENST00000589781 TATDN1Q6P1N9 297 aa11.75□□□□□ -0.53
APOC1-205ENST00000589781 C17orf99Q6UX52 265 aa11.75□□□□□ -0.53
APOC1-205ENST00000589781 OTOP1Q7RTM1 612 aa11.75□□□□□ -0.53
APOC1-205ENST00000589781 BRAPQ7Z569 592 aa11.75□□□□□ -0.53
APOC1-205ENST00000589781 FOXP4Q8IVH2 680 aaPredicted RBP11.75□□□□□ -0.53
APOC1-205ENST00000589781 LEO1Q8WVC0 666 aaPredicted RBP11.75□□□□□ -0.53
APOC1-205ENST00000589781 MAP3K14Q99558 947 aa11.75□□□□□ -0.53
APOC1-205ENST00000589781 CPVLQ9H3G5 476 aa11.75□□□□□ -0.53
APOC1-205ENST00000589781 VPS54Q9P1Q0 977 aa11.75□□□□□ -0.53
APOC1-205ENST00000589781 CLIP2Q9UDT6 1046 aa11.75□□□□□ -0.53
APOC1-205ENST00000589781 HERC5Q9UII4 1024 aaKnown RBP11.75□□□□□ -0.53
APOC1-205ENST00000589781 V9GY48 417 aaPredicted RBP11.75□□□□□ -0.53
APOC1-205ENST00000589781 FRMPD2Q68DX3 1309 aaPredicted RBP11.75□□□□□ -0.53
APOC1-205ENST00000589781 HTTP42858 3142 aa11.74□□□□□ -0.53
APOC1-205ENST00000589781 PALM3A6NDB9 673 aaPredicted RBP11.74□□□□□ -0.53
APOC1-205ENST00000589781 TRIM75PA6NK02 468 aa11.74□□□□□ -0.53
APOC1-205ENST00000589781 USP17L5A8MUK1 530 aa11.74□□□□□ -0.53
APOC1-205ENST00000589781 TLR2O60603 784 aa11.74□□□□□ -0.53
APOC1-205ENST00000589781 PARP1P09874 1014 aaKnown RBP11.74□□□□□ -0.53
APOC1-205ENST00000589781 GNAQP50148 359 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms