RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 TRIOBPQ9H2D6 2365 aa17.04■□□□□ 0.32
MBD1-220ENST00000589758 BMP3P12645 472 aa17.04■□□□□ 0.32
MBD1-220ENST00000589758 OAZ1P54368 228 aa17.04■□□□□ 0.32
MBD1-220ENST00000589758 GJC2Q5T442 439 aaPredicted RBP17.04■□□□□ 0.32
MBD1-220ENST00000589758 SLFN13Q68D06 897 aa17.04■□□□□ 0.32
MBD1-220ENST00000589758 SNRNP48Q6IEG0 339 aaKnown RBP17.04■□□□□ 0.32
MBD1-220ENST00000589758 CCDC129Q6ZRS4 1044 aa17.04■□□□□ 0.32
MBD1-220ENST00000589758 LRRC47Q8N1G4 583 aaKnown RBP17.04■□□□□ 0.32
MBD1-220ENST00000589758 KIFC2Q96AC6 838 aa17.04■□□□□ 0.32
MBD1-220ENST00000589758 DDX11Q96FC9 970 aa17.04■□□□□ 0.32
MBD1-220ENST00000589758 RWDD1Q9H446 243 aaPredicted RBP17.04■□□□□ 0.32
MBD1-220ENST00000589758 SLC38A10Q9HBR0 1119 aa17.04■□□□□ 0.32
MBD1-220ENST00000589758 PLXNA1Q9UIW2 1896 aa17.03■□□□□ 0.32
MBD1-220ENST00000589758 TSPY2A6NKD2 308 aa17.03■□□□□ 0.32
MBD1-220ENST00000589758 MAGEA10P43363 369 aaPredicted RBP17.03■□□□□ 0.32
MBD1-220ENST00000589758 ALX1Q15699 326 aa17.03■□□□□ 0.32
MBD1-220ENST00000589758 CPXCR1Q8N123 301 aa17.03■□□□□ 0.32
MBD1-220ENST00000589758 FBXO40Q9UH90 709 aa17.03■□□□□ 0.32
MBD1-220ENST00000589758 ANAPC4Q9UJX5 808 aa17.03■□□□□ 0.32
MBD1-220ENST00000589758 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.03■□□□□ 0.32
MBD1-220ENST00000589758 FOXP2O15409 715 aa17.02■□□□□ 0.32
MBD1-220ENST00000589758 RARBP10826 455 aa17.02■□□□□ 0.32
MBD1-220ENST00000589758 STAT2P52630 851 aa17.02■□□□□ 0.32
MBD1-220ENST00000589758 MCMDC2Q4G0Z9 681 aa17.02■□□□□ 0.32
MBD1-220ENST00000589758 ANO1Q5XXA6 986 aa17.02■□□□□ 0.32
MBD1-220ENST00000589758 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.02■□□□□ 0.32
MBD1-220ENST00000589758 FAM160B2Q86V87 743 aa17.02■□□□□ 0.32
MBD1-220ENST00000589758 CHST13Q8NET6 341 aa17.02■□□□□ 0.32
MBD1-220ENST00000589758 CHURC1Q8WUH1 139 aa17.02■□□□□ 0.32
MBD1-220ENST00000589758 LNPKQ9C0E8 428 aa17.02■□□□□ 0.32
MBD1-220ENST00000589758 RAVER2Q9HCJ3 691 aaKnown RBP17.02■□□□□ 0.32
MBD1-220ENST00000589758 CNPY2Q9Y2B0 182 aa17.02■□□□□ 0.32
MBD1-220ENST00000589758 RIPK3Q9Y572 518 aa17.02■□□□□ 0.32
MBD1-220ENST00000589758 ATN1P54259 1190 aaPredicted RBP17.01■□□□□ 0.31
MBD1-220ENST00000589758 CTDSPL2Q05D32 466 aa17.01■□□□□ 0.31
MBD1-220ENST00000589758 VPS53Q5VIR6 699 aa17.01■□□□□ 0.31
MBD1-220ENST00000589758 ZNF467Q7Z7K2 595 aaPredicted RBP17.01■□□□□ 0.31
MBD1-220ENST00000589758 SMC5Q8IY18 1101 aa17.01■□□□□ 0.31
MBD1-220ENST00000589758 GMCL1Q96IK5 515 aa17.01■□□□□ 0.31
MBD1-220ENST00000589758 UBE2OQ9C0C9 1292 aaKnown RBP17.01■□□□□ 0.31
MBD1-220ENST00000589758 PRKAG2Q9UGJ0 569 aa17.01■□□□□ 0.31
MBD1-220ENST00000589758 ISY1Q9ULR0 285 aaKnown RBP17.01■□□□□ 0.31
MBD1-220ENST00000589758 SYNGAP1Q96PV0 1343 aa17■□□□□ 0.31
MBD1-220ENST00000589758 DNAJC25-GNG10A0A024R161 153 aa17■□□□□ 0.31
MBD1-220ENST00000589758 TMEM232C9JQI7 657 aa17■□□□□ 0.31
MBD1-220ENST00000589758 ORC4O43929 436 aa17■□□□□ 0.31
MBD1-220ENST00000589758 RANBP6O60518 1105 aaKnown RBP17■□□□□ 0.31
MBD1-220ENST00000589758 PLA2G6O60733 806 aa17■□□□□ 0.31
MBD1-220ENST00000589758 MYCNP04198 464 aaPredicted RBP17■□□□□ 0.31
MBD1-220ENST00000589758 AKR1A1P14550 325 aa17■□□□□ 0.31
MBD1-220ENST00000589758 SLC1A4P43007 532 aa17■□□□□ 0.31
MBD1-220ENST00000589758 SLC4A3P48751 1232 aa17■□□□□ 0.31
MBD1-220ENST00000589758 RTP1P59025 263 aa17■□□□□ 0.31
MBD1-220ENST00000589758 LRRC41Q15345 812 aa17■□□□□ 0.31
MBD1-220ENST00000589758 MAMDC4Q6UXC1 1216 aa17■□□□□ 0.31
MBD1-220ENST00000589758 SLC39A5Q6ZMH5 540 aa17■□□□□ 0.31
MBD1-220ENST00000589758 RNF180Q86T96 592 aa17■□□□□ 0.31
MBD1-220ENST00000589758 TDHQ8IZJ6 230 aa17■□□□□ 0.31
MBD1-220ENST00000589758 STAG1Q8WVM7 1258 aa17■□□□□ 0.31
MBD1-220ENST00000589758 LBHD1Q9BQE6 289 aaPredicted RBP17■□□□□ 0.31
MBD1-220ENST00000589758 XPNPEP3Q9NQH7 507 aa17■□□□□ 0.31
MBD1-220ENST00000589758 STX8Q9UNK0 236 aa17■□□□□ 0.31
MBD1-220ENST00000589758 TRIM6-TRIM34B2RNG4 842 aa16.99■□□□□ 0.31
MBD1-220ENST00000589758 FGRP09769 529 aa16.99■□□□□ 0.31
MBD1-220ENST00000589758 ZNF865P0CJ78 1059 aaPredicted RBP16.99■□□□□ 0.31
MBD1-220ENST00000589758 IKQ13123 557 aaPredicted RBP16.99■□□□□ 0.31
MBD1-220ENST00000589758 C1orf53Q5VUE5 145 aa16.99■□□□□ 0.31
MBD1-220ENST00000589758 ANKRD35Q8N283 1001 aa16.99■□□□□ 0.31
MBD1-220ENST00000589758 FAM227BQ96M60 508 aa16.99■□□□□ 0.31
MBD1-220ENST00000589758 IL17RBQ9NRM6 502 aa16.99■□□□□ 0.31
MBD1-220ENST00000589758 ZMYM6O95789 1325 aa16.98■□□□□ 0.31
MBD1-220ENST00000589758 A0A0D9SFI3 127 aa16.98■□□□□ 0.31
MBD1-220ENST00000589758 IGHDP01880 384 aa16.98■□□□□ 0.31
MBD1-220ENST00000589758 FGAP02671 866 aa16.98■□□□□ 0.31
MBD1-220ENST00000589758 MCCP23508 829 aa16.98■□□□□ 0.31
MBD1-220ENST00000589758 ADCYAP1R1P41586 468 aa16.98■□□□□ 0.31
MBD1-220ENST00000589758 MFAP1P55081 439 aaKnown RBP16.98■□□□□ 0.31
MBD1-220ENST00000589758 MDM2Q00987 491 aaPredicted RBP16.98■□□□□ 0.31
MBD1-220ENST00000589758 SNX17Q15036 470 aa16.98■□□□□ 0.31
MBD1-220ENST00000589758 LRIT3Q3SXY7 679 aa16.98■□□□□ 0.31
MBD1-220ENST00000589758 RCSD1Q6JBY9 416 aa16.98■□□□□ 0.31
MBD1-220ENST00000589758 B4GALNT3Q6L9W6 998 aa16.98■□□□□ 0.31
MBD1-220ENST00000589758 GPR153Q6NV75 609 aa16.98■□□□□ 0.31
MBD1-220ENST00000589758 CHD1LQ86WJ1 897 aa16.98■□□□□ 0.31
MBD1-220ENST00000589758 RILPL2Q969X0 211 aa16.98■□□□□ 0.31
MBD1-220ENST00000589758 OSBPL3Q9H4L5 887 aa16.98■□□□□ 0.31
MBD1-220ENST00000589758 INCENPQ9NQS7 918 aa16.98■□□□□ 0.31
MBD1-220ENST00000589758 FAM184BQ9ULE4 1060 aa16.98■□□□□ 0.31
MBD1-220ENST00000589758 PHF24Q9UPV7 400 aa16.98■□□□□ 0.31
MBD1-220ENST00000589758 ATP11BQ9Y2G3 1177 aa16.98■□□□□ 0.31
MBD1-220ENST00000589758 SMCHD1A6NHR9 2005 aa16.97■□□□□ 0.31
MBD1-220ENST00000589758 SOX1O00570 391 aaPredicted RBP16.97■□□□□ 0.31
MBD1-220ENST00000589758 HSPD1P10809 573 aaKnown RBP16.97■□□□□ 0.31
MBD1-220ENST00000589758 PCP11498 1178 aaKnown RBP16.97■□□□□ 0.31
MBD1-220ENST00000589758 TAL1P17542 331 aaPredicted RBP16.97■□□□□ 0.31
MBD1-220ENST00000589758 NOVP48745 357 aa16.97■□□□□ 0.31
MBD1-220ENST00000589758 NMIQ13287 307 aaPredicted RBP16.97■□□□□ 0.31
MBD1-220ENST00000589758 TKFCQ3LXA3 575 aa16.97■□□□□ 0.31
MBD1-220ENST00000589758 ACAD9Q9H845 621 aa16.97■□□□□ 0.31
MBD1-220ENST00000589758 TOMM22Q9NS69 142 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms