RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 ANAPC4Q9UJX5 808 aa14.52□□□□□ -0.09
VAT1-206ENST00000589709 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.52□□□□□ -0.09
VAT1-206ENST00000589709 RIPK3Q9Y572 518 aa14.52□□□□□ -0.09
VAT1-206ENST00000589709 ZNFX1Q9P2E3 1918 aaKnown RBP14.51□□□□□ -0.09
VAT1-206ENST00000589709 COL11A1P12107 1806 aaPredicted RBP14.51□□□□□ -0.09
VAT1-206ENST00000589709 FRMPD3Q5JV73 1810 aa14.51□□□□□ -0.09
VAT1-206ENST00000589709 DNAJC25-GNG10A0A024R161 153 aa14.51□□□□□ -0.09
VAT1-206ENST00000589709 KBTBD13C9JR72 458 aa14.51□□□□□ -0.09
VAT1-206ENST00000589709 SOX1O00570 391 aaPredicted RBP14.51□□□□□ -0.09
VAT1-206ENST00000589709 BMP3P12645 472 aa14.51□□□□□ -0.09
VAT1-206ENST00000589709 LRIT3Q3SXY7 679 aa14.51□□□□□ -0.09
VAT1-206ENST00000589709 FAM47AQ5JRC9 791 aa14.51□□□□□ -0.09
VAT1-206ENST00000589709 GPR153Q6NV75 609 aa14.51□□□□□ -0.09
VAT1-206ENST00000589709 MAMDC4Q6UXC1 1216 aa14.51□□□□□ -0.09
VAT1-206ENST00000589709 ZNF467Q7Z7K2 595 aaPredicted RBP14.51□□□□□ -0.09
VAT1-206ENST00000589709 GMCL1Q96IK5 515 aa14.51□□□□□ -0.09
VAT1-206ENST00000589709 UBE2OQ9C0C9 1292 aaKnown RBP14.51□□□□□ -0.09
VAT1-206ENST00000589709 PLA2G6O60733 806 aa14.5□□□□□ -0.09
VAT1-206ENST00000589709 FGRP09769 529 aa14.5□□□□□ -0.09
VAT1-206ENST00000589709 ZNF865P0CJ78 1059 aaPredicted RBP14.5□□□□□ -0.09
VAT1-206ENST00000589709 RARBP10826 455 aa14.5□□□□□ -0.09
VAT1-206ENST00000589709 ATN1P54259 1190 aaPredicted RBP14.5□□□□□ -0.09
VAT1-206ENST00000589709 SNX17Q15036 470 aa14.5□□□□□ -0.09
VAT1-206ENST00000589709 LRRC41Q15345 812 aa14.5□□□□□ -0.09
VAT1-206ENST00000589709 C1orf53Q5VUE5 145 aa14.5□□□□□ -0.09
VAT1-206ENST00000589709 ANO1Q5XXA6 986 aa14.5□□□□□ -0.09
VAT1-206ENST00000589709 SLC39A5Q6ZMH5 540 aa14.5□□□□□ -0.09
VAT1-206ENST00000589709 CCDC129Q6ZRS4 1044 aa14.5□□□□□ -0.09
VAT1-206ENST00000589709 SMC5Q8IY18 1101 aa14.5□□□□□ -0.09
VAT1-206ENST00000589709 TDHQ8IZJ6 230 aa14.5□□□□□ -0.09
VAT1-206ENST00000589709 CPXCR1Q8N123 301 aa14.5□□□□□ -0.09
VAT1-206ENST00000589709 LRRC47Q8N1G4 583 aaKnown RBP14.5□□□□□ -0.09
VAT1-206ENST00000589709 CHST13Q8NET6 341 aa14.5□□□□□ -0.09
VAT1-206ENST00000589709 CHURC1Q8WUH1 139 aa14.5□□□□□ -0.09
VAT1-206ENST00000589709 KIFC2Q96AC6 838 aa14.5□□□□□ -0.09
VAT1-206ENST00000589709 DDX11Q96FC9 970 aa14.5□□□□□ -0.09
VAT1-206ENST00000589709 FBXO40Q9UH90 709 aa14.5□□□□□ -0.09
VAT1-206ENST00000589709 CNPY2Q9Y2B0 182 aa14.5□□□□□ -0.09
VAT1-206ENST00000589709 CTDP1Q9Y5B0 961 aaPredicted RBP14.5□□□□□ -0.09
VAT1-206ENST00000589709 SYNGAP1Q96PV0 1343 aa14.49□□□□□ -0.09
VAT1-206ENST00000589709 ORC4O43929 436 aa14.49□□□□□ -0.09
VAT1-206ENST00000589709 AKR1A1P14550 325 aa14.49□□□□□ -0.09
VAT1-206ENST00000589709 TAL1P17542 331 aaPredicted RBP14.49□□□□□ -0.09
VAT1-206ENST00000589709 NOVP48745 357 aa14.49□□□□□ -0.09
VAT1-206ENST00000589709 RTP1P59025 263 aa14.49□□□□□ -0.09
VAT1-206ENST00000589709 FAM160B2Q86V87 743 aa14.49□□□□□ -0.09
VAT1-206ENST00000589709 STAG1Q8WVM7 1258 aa14.49□□□□□ -0.09
VAT1-206ENST00000589709 RWDD1Q9H446 243 aaPredicted RBP14.49□□□□□ -0.09
VAT1-206ENST00000589709 RAVER2Q9HCJ3 691 aaKnown RBP14.49□□□□□ -0.09
VAT1-206ENST00000589709 XPNPEP3Q9NQH7 507 aa14.49□□□□□ -0.09
VAT1-206ENST00000589709 IL17RBQ9NRM6 502 aa14.49□□□□□ -0.09
VAT1-206ENST00000589709 PHF24Q9UPV7 400 aa14.49□□□□□ -0.09
VAT1-206ENST00000589709 SZT2Q5T011 3432 aa14.49□□□□□ -0.09
VAT1-206ENST00000589709 TSPY2A6NKD2 308 aa14.48□□□□□ -0.09
VAT1-206ENST00000589709 TMEM232C9JQI7 657 aa14.48□□□□□ -0.09
VAT1-206ENST00000589709 SNAI1O95863 264 aaPredicted RBP14.48□□□□□ -0.09
VAT1-206ENST00000589709 ADCYAP1R1P41586 468 aa14.48□□□□□ -0.09
VAT1-206ENST00000589709 SLC1A4P43007 532 aa14.48□□□□□ -0.09
VAT1-206ENST00000589709 STAT2P52630 851 aa14.48□□□□□ -0.09
VAT1-206ENST00000589709 CTDSPL2Q05D32 466 aa14.48□□□□□ -0.09
VAT1-206ENST00000589709 MCMDC2Q4G0Z9 681 aa14.48□□□□□ -0.09
VAT1-206ENST00000589709 VPS53Q5VIR6 699 aa14.48□□□□□ -0.09
VAT1-206ENST00000589709 RCSD1Q6JBY9 416 aa14.48□□□□□ -0.09
VAT1-206ENST00000589709 RNF180Q86T96 592 aa14.48□□□□□ -0.09
VAT1-206ENST00000589709 LRCH3Q96II8 777 aa14.48□□□□□ -0.09
VAT1-206ENST00000589709 LBHD1Q9BQE6 289 aaPredicted RBP14.48□□□□□ -0.09
VAT1-206ENST00000589709 PRKAG2Q9UGJ0 569 aa14.48□□□□□ -0.09
VAT1-206ENST00000589709 MYH4Q9Y623 1939 aa14.48□□□□□ -0.09
VAT1-206ENST00000589709 DNAH12Q6ZR08 3092 aa14.47□□□□□ -0.09
VAT1-206ENST00000589709 FGAP02671 866 aa14.47□□□□□ -0.09
VAT1-206ENST00000589709 MCCP23508 829 aa14.47□□□□□ -0.09
VAT1-206ENST00000589709 MDM2Q00987 491 aaPredicted RBP14.47□□□□□ -0.09
VAT1-206ENST00000589709 ANKRD35Q8N283 1001 aa14.47□□□□□ -0.09
VAT1-206ENST00000589709 FAM227BQ96M60 508 aa14.47□□□□□ -0.09
VAT1-206ENST00000589709 INCENPQ9NQS7 918 aa14.47□□□□□ -0.09
VAT1-206ENST00000589709 FAM184BQ9ULE4 1060 aa14.47□□□□□ -0.09
VAT1-206ENST00000589709 STX8Q9UNK0 236 aa14.47□□□□□ -0.09
VAT1-206ENST00000589709 ATP11BQ9Y2G3 1177 aa14.47□□□□□ -0.09
VAT1-206ENST00000589709 SMCHD1A6NHR9 2005 aa14.47□□□□□ -0.09
VAT1-206ENST00000589709 ZMYM6O95789 1325 aa14.46□□□□□ -0.09
VAT1-206ENST00000589709 A0A0D9SFI3 127 aa14.46□□□□□ -0.09
VAT1-206ENST00000589709 RANBP6O60518 1105 aaKnown RBP14.46□□□□□ -0.09
VAT1-206ENST00000589709 ADAMTS4O75173 837 aa14.46□□□□□ -0.09
VAT1-206ENST00000589709 MYCNP04198 464 aaPredicted RBP14.46□□□□□ -0.09
VAT1-206ENST00000589709 SLC4A3P48751 1232 aa14.46□□□□□ -0.09
VAT1-206ENST00000589709 TKFCQ3LXA3 575 aa14.46□□□□□ -0.09
VAT1-206ENST00000589709 TSEN34Q9BSV6 310 aaKnown RBP14.46□□□□□ -0.09
VAT1-206ENST00000589709 LNPKQ9C0E8 428 aa14.46□□□□□ -0.09
VAT1-206ENST00000589709 OSBPL3Q9H4L5 887 aa14.46□□□□□ -0.09
VAT1-206ENST00000589709 TACC3Q9Y6A5 838 aa14.46□□□□□ -0.09
VAT1-206ENST00000589709 PLXNA1Q9UIW2 1896 aa14.46□□□□□ -0.1
VAT1-206ENST00000589709 ZNF536O15090 1300 aa14.45□□□□□ -0.1
VAT1-206ENST00000589709 NMT2O60551 498 aa14.45□□□□□ -0.1
VAT1-206ENST00000589709 DUSP11O75319 330 aaKnown RBP14.45□□□□□ -0.1
VAT1-206ENST00000589709 PGK1P00558 417 aa14.45□□□□□ -0.1
VAT1-206ENST00000589709 CENPBP07199 599 aaPredicted RBP14.45□□□□□ -0.1
VAT1-206ENST00000589709 HSPD1P10809 573 aaKnown RBP14.45□□□□□ -0.1
VAT1-206ENST00000589709 PCP11498 1178 aaKnown RBP14.45□□□□□ -0.1
VAT1-206ENST00000589709 TRIM60Q495X7 471 aa14.45□□□□□ -0.1
VAT1-206ENST00000589709 KLHDC9Q8NEP7 349 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms