RNA–Protein interactions for RNA: ENST00000589559.5

RBM42-204, Transcript of RNA binding motif protein 42, humanhuman

TSL 5 BASIC

Gene RBM42, Length 1,328 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM42-204ENST00000589559 GJD2Q9UKL4 321 aa23.59■■□□□ 1.37
RBM42-204ENST00000589559 CENPFP49454 3210 aa23.59■■□□□ 1.37
RBM42-204ENST00000589559 PTPREP23469 700 aa23.59■■□□□ 1.37
RBM42-204ENST00000589559 CCDC96Q2M329 555 aa23.59■■□□□ 1.37
RBM42-204ENST00000589559 PNMA1Q8ND90 353 aa23.59■■□□□ 1.37
RBM42-204ENST00000589559 ZKSCAN3Q9BRR0 538 aa23.59■■□□□ 1.37
RBM42-204ENST00000589559 TMEM106CQ9BVX2 250 aa23.59■■□□□ 1.37
RBM42-204ENST00000589559 PORCNQ9H237 461 aa23.59■■□□□ 1.37
RBM42-204ENST00000589559 GABRQQ9UN88 632 aa23.59■■□□□ 1.37
RBM42-204ENST00000589559 TNKSO95271 1327 aa23.58■■□□□ 1.37
RBM42-204ENST00000589559 SLC27A2O14975 620 aa23.58■■□□□ 1.36
RBM42-204ENST00000589559 MCM5P33992 734 aa23.58■■□□□ 1.36
RBM42-204ENST00000589559 TMEM132BQ14DG7 1078 aa23.58■■□□□ 1.36
RBM42-204ENST00000589559 CREB3L3Q68CJ9 461 aa23.58■■□□□ 1.36
RBM42-204ENST00000589559 POTEEQ6S8J3 1075 aa23.58■■□□□ 1.36
RBM42-204ENST00000589559 NCAPG2Q86XI2 1143 aa23.58■■□□□ 1.36
RBM42-204ENST00000589559 SLC38A10Q9HBR0 1119 aa23.58■■□□□ 1.36
RBM42-204ENST00000589559 FBXO40Q9UH90 709 aa23.58■■□□□ 1.36
RBM42-204ENST00000589559 RLFQ13129 1914 aa23.57■■□□□ 1.36
RBM42-204ENST00000589559 IFIT3O14879 490 aaKnown RBP23.57■■□□□ 1.36
RBM42-204ENST00000589559 PDHBP11177 359 aa23.57■■□□□ 1.36
RBM42-204ENST00000589559 FCER1AP12319 257 aa23.57■■□□□ 1.36
RBM42-204ENST00000589559 ERCC3P19447 782 aa23.57■■□□□ 1.36
RBM42-204ENST00000589559 MAP2K5Q13163 448 aa23.57■■□□□ 1.36
RBM42-204ENST00000589559 TSGA10IPQ3SY00 556 aa23.57■■□□□ 1.36
RBM42-204ENST00000589559 BTNL9Q6UXG8 535 aa23.57■■□□□ 1.36
RBM42-204ENST00000589559 ENAHQ8N8S7 591 aaPredicted RBP23.57■■□□□ 1.36
RBM42-204ENST00000589559 HMGB1P09429 215 aaKnown RBP23.56■■□□□ 1.36
RBM42-204ENST00000589559 SNHG28P0DPA3 235 aa23.56■■□□□ 1.36
RBM42-204ENST00000589559 PARP14Q460N5 1801 aa23.56■■□□□ 1.36
RBM42-204ENST00000589559 ASPRV1Q53RT3 343 aa23.56■■□□□ 1.36
RBM42-204ENST00000589559 MORN1Q5T089 497 aa23.56■■□□□ 1.36
RBM42-204ENST00000589559 KCTD1Q719H9 257 aa23.56■■□□□ 1.36
RBM42-204ENST00000589559 ZNF333Q96JL9 665 aa23.56■■□□□ 1.36
RBM42-204ENST00000589559 TMEM87BQ96K49 555 aa23.56■■□□□ 1.36
RBM42-204ENST00000589559 ZNF214Q9UL59 606 aaPredicted RBP23.56■■□□□ 1.36
RBM42-204ENST00000589559 MTMR7Q9Y216 660 aa23.56■■□□□ 1.36
RBM42-204ENST00000589559 KCTD2Q14681 263 aa23.55■■□□□ 1.36
RBM42-204ENST00000589559 WTAPQ15007 396 aa23.55■■□□□ 1.36
RBM42-204ENST00000589559 TKFCQ3LXA3 575 aa23.55■■□□□ 1.36
RBM42-204ENST00000589559 DPP9Q86TI2 863 aa23.55■■□□□ 1.36
RBM42-204ENST00000589559 CHST13Q8NET6 341 aa23.55■■□□□ 1.36
RBM42-204ENST00000589559 GTF3C3Q9Y5Q9 886 aa23.55■■□□□ 1.36
RBM42-204ENST00000589559 HOXC6P09630 235 aa23.54■■□□□ 1.36
RBM42-204ENST00000589559 ZNF543Q08ER8 600 aa23.54■■□□□ 1.36
RBM42-204ENST00000589559 GRB14Q14449 540 aa23.54■■□□□ 1.36
RBM42-204ENST00000589559 REPS2Q8NFH8 660 aa23.54■■□□□ 1.36
RBM42-204ENST00000589559 NKX2-3Q8TAU0 364 aa23.54■■□□□ 1.36
RBM42-204ENST00000589559 USP6NLQ92738 828 aa23.54■■□□□ 1.36
RBM42-204ENST00000589559 APBA2Q99767 749 aa23.54■■□□□ 1.36
RBM42-204ENST00000589559 PRR12Q9ULL5 1215 aa23.54■■□□□ 1.36
RBM42-204ENST00000589559 DOCK3Q8IZD9 2030 aa23.53■■□□□ 1.36
RBM42-204ENST00000589559 A0A0G2JMZ2 1700 aa23.53■■□□□ 1.36
RBM42-204ENST00000589559 PEX10O60683 326 aa23.53■■□□□ 1.36
RBM42-204ENST00000589559 HMGCRP04035 888 aa23.53■■□□□ 1.36
RBM42-204ENST00000589559 CYP2B6P20813 491 aa23.53■■□□□ 1.36
RBM42-204ENST00000589559 SEC23AQ15436 765 aa23.53■■□□□ 1.36
RBM42-204ENST00000589559 SNRNP48Q6IEG0 339 aaKnown RBP23.53■■□□□ 1.36
RBM42-204ENST00000589559 CYB5R4Q7L1T6 521 aa23.53■■□□□ 1.36
RBM42-204ENST00000589559 CPXCR1Q8N123 301 aa23.53■■□□□ 1.36
RBM42-204ENST00000589559 PARP1P09874 1014 aaKnown RBP23.52■■□□□ 1.36
RBM42-204ENST00000589559 TMEM67Q5HYA8 995 aa23.52■■□□□ 1.36
RBM42-204ENST00000589559 SYDE2Q5VT97 1194 aa23.52■■□□□ 1.36
RBM42-204ENST00000589559 CATIPQ7Z7H3 387 aa23.52■■□□□ 1.36
RBM42-204ENST00000589559 SH3TC2Q8TF17 1288 aa23.52■■□□□ 1.36
RBM42-204ENST00000589559 NEK1Q96PY6 1258 aa23.52■■□□□ 1.36
RBM42-204ENST00000589559 CAPN15O75808 1086 aa23.51■■□□□ 1.35
RBM42-204ENST00000589559 MB21D2Q8IYB1 491 aaPredicted RBP23.51■■□□□ 1.35
RBM42-204ENST00000589559 MMP19Q99542 508 aa23.51■■□□□ 1.35
RBM42-204ENST00000589559 MAP3K14Q99558 947 aa23.51■■□□□ 1.35
RBM42-204ENST00000589559 GPCPD1Q9NPB8 672 aa23.51■■□□□ 1.35
RBM42-204ENST00000589559 DIS3Q9Y2L1 958 aaKnown RBP23.51■■□□□ 1.35
RBM42-204ENST00000589559 WDR19Q8NEZ3 1342 aa23.5■■□□□ 1.35
RBM42-204ENST00000589559 ADORA2AP29274 412 aa23.5■■□□□ 1.35
RBM42-204ENST00000589559 TRAF1Q13077 416 aa23.5■■□□□ 1.35
RBM42-204ENST00000589559 MFSD14CQ5VZR4 134 aa23.5■■□□□ 1.35
RBM42-204ENST00000589559 STOX1Q6ZVD7 989 aa23.5■■□□□ 1.35
RBM42-204ENST00000589559 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.5■■□□□ 1.35
RBM42-204ENST00000589559 DDX11Q96FC9 970 aa23.5■■□□□ 1.35
RBM42-204ENST00000589559 MAF1Q9H063 256 aa23.5■■□□□ 1.35
RBM42-204ENST00000589559 RAVER2Q9HCJ3 691 aaKnown RBP23.5■■□□□ 1.35
RBM42-204ENST00000589559 COL11A1P12107 1806 aaPredicted RBP23.5■■□□□ 1.35
RBM42-204ENST00000589559 FRMPD2Q68DX3 1309 aaPredicted RBP23.49■■□□□ 1.35
RBM42-204ENST00000589559 PRC1O43663 620 aa23.49■■□□□ 1.35
RBM42-204ENST00000589559 HSPA4P34932 840 aa23.49■■□□□ 1.35
RBM42-204ENST00000589559 LIFRP42702 1097 aa23.49■■□□□ 1.35
RBM42-204ENST00000589559 IGDCC4Q8TDY8 1250 aa23.49■■□□□ 1.35
RBM42-204ENST00000589559 RANBP17Q9H2T7 1088 aaKnown RBP23.49■■□□□ 1.35
RBM42-204ENST00000589559 CCDC69A6NI79 296 aa23.48■■□□□ 1.35
RBM42-204ENST00000589559 ICAM1P05362 532 aa23.48■■□□□ 1.35
RBM42-204ENST00000589559 CALM1P0DP23 149 aa23.48■■□□□ 1.35
RBM42-204ENST00000589559 CALM2P0DP24 149 aa23.48■■□□□ 1.35
RBM42-204ENST00000589559 CALM3P0DP25 149 aa23.48■■□□□ 1.35
RBM42-204ENST00000589559 PSMA5P28066 241 aa23.48■■□□□ 1.35
RBM42-204ENST00000589559 SYNE3Q6ZMZ3 975 aa23.48■■□□□ 1.35
RBM42-204ENST00000589559 ACAD9Q9H845 621 aa23.48■■□□□ 1.35
RBM42-204ENST00000589559 HMX1Q9NP08 348 aaPredicted RBP23.48■■□□□ 1.35
RBM42-204ENST00000589559 RPTORQ8N122 1335 aa23.47■■□□□ 1.35
RBM42-204ENST00000589559 INHAP05111 366 aa23.47■■□□□ 1.35
RBM42-204ENST00000589559 ELNP15502 786 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms