RNA–Protein interactions for RNA: ENST00000589057.5

APOC4-APOC2-202, Transcript of APOC4-APOC2 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene APOC4-APOC2, Length 680 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-APOC2-202ENST00000589057 ZMYM1Q5SVZ6 1142 aa13.22□□□□□ -0.29
APOC4-APOC2-202ENST00000589057 C1orf53Q5VUE5 145 aa13.22□□□□□ -0.29
APOC4-APOC2-202ENST00000589057 LRRC47Q8N1G4 583 aaKnown RBP13.22□□□□□ -0.29
APOC4-APOC2-202ENST00000589057 LENG1Q96BZ8 264 aaPredicted RBP13.22□□□□□ -0.29
APOC4-APOC2-202ENST00000589057 ZNF287Q9HBT7 754 aa13.22□□□□□ -0.29
APOC4-APOC2-202ENST00000589057 PRKAG2Q9UGJ0 569 aa13.22□□□□□ -0.29
APOC4-APOC2-202ENST00000589057 PHF24Q9UPV7 400 aa13.22□□□□□ -0.29
APOC4-APOC2-202ENST00000589057 DNAH12Q6ZR08 3092 aa13.21□□□□□ -0.29
APOC4-APOC2-202ENST00000589057 SALL3Q9BXA9 1300 aa13.21□□□□□ -0.29
APOC4-APOC2-202ENST00000589057 RARBP10826 455 aa13.21□□□□□ -0.29
APOC4-APOC2-202ENST00000589057 LRRFIP1Q32MZ4 808 aaKnown RBP13.21□□□□□ -0.29
APOC4-APOC2-202ENST00000589057 SH3RF1Q7Z6J0 888 aa13.21□□□□□ -0.29
APOC4-APOC2-202ENST00000589057 CPXCR1Q8N123 301 aa13.21□□□□□ -0.29
APOC4-APOC2-202ENST00000589057 SLC17A8Q8NDX2 589 aa13.21□□□□□ -0.29
APOC4-APOC2-202ENST00000589057 GMCL1P1Q8NEA9 526 aa13.21□□□□□ -0.29
APOC4-APOC2-202ENST00000589057 NEDD1Q8NHV4 660 aa13.21□□□□□ -0.29
APOC4-APOC2-202ENST00000589057 FSD1Q9BTV5 496 aa13.21□□□□□ -0.29
APOC4-APOC2-202ENST00000589057 RAVER2Q9HCJ3 691 aaKnown RBP13.21□□□□□ -0.29
APOC4-APOC2-202ENST00000589057 PDLIM7Q9NR12 457 aa13.21□□□□□ -0.29
APOC4-APOC2-202ENST00000589057 SYNPO2Q9UMS6 1093 aa13.21□□□□□ -0.29
APOC4-APOC2-202ENST00000589057 MCM3APO60318 1980 aa13.21□□□□□ -0.29
APOC4-APOC2-202ENST00000589057 TRIM43BA6NCK2 446 aa13.2□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 FOXP2O15409 715 aa13.2□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 ZBED4O75132 1171 aa13.2□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 ADAMTS4O75173 837 aa13.2□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 SNAI1O95863 264 aaPredicted RBP13.2□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 TTLL1O95922 423 aa13.2□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 AKR1A1P14550 325 aa13.2□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 MX1P20591 662 aa13.2□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 PPARAQ07869 468 aa13.2□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 MAMDC4Q6UXC1 1216 aa13.2□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.2□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 MSL3Q8N5Y2 521 aaKnown RBP13.2□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 BADQ92934 168 aa13.2□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 KIFC2Q96AC6 838 aa13.2□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 TRIM43Q96BQ3 446 aaPredicted RBP13.2□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 DDX11Q96FC9 970 aa13.2□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 NACAP1Q9BZK3 213 aa13.2□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 SLC38A10Q9HBR0 1119 aa13.2□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 PRDM5Q9NQX1 630 aaPredicted RBP13.2□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 FEM1BQ9UK73 627 aa13.2□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 CNPY2Q9Y2B0 182 aa13.2□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 COL6A3P12111 3177 aa13.2□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 SYNGAP1Q96PV0 1343 aa13.19□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 POTEB2H3BUK9 544 aa13.19□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 TSPY3P0CV98 308 aa13.19□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 TSPY8P0CW00 308 aa13.19□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 SLC4A3P48751 1232 aa13.19□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 TFAP4Q01664 338 aa13.19□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 TLE2Q04725 743 aa13.19□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 PDE4BQ07343 736 aa13.19□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 SHHQ15465 462 aa13.19□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 C9orf50Q5SZB4 431 aa13.19□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 SLFN13Q68D06 897 aa13.19□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 RNF180Q86T96 592 aa13.19□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 FGD4Q96M96 766 aa13.19□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 NAPBQ9H115 298 aa13.19□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 STXBP5LQ9Y2K9 1186 aa13.19□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 SYNRGQ9UMZ2 1314 aa13.18□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 A0A1W2PQ45 241 aaPredicted RBP13.18□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 A0A1W2PQY0 241 aa13.18□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 ADCY6O43306 1168 aa13.18□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 BMP3P12645 472 aa13.18□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 ITGB8P26012 769 aa13.18□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 RRP1P56182 461 aaKnown RBP13.18□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 FAM109BQ6ICB4 259 aaPredicted RBP13.18□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 CCDC129Q6ZRS4 1044 aa13.18□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 ZNF467Q7Z7K2 595 aaPredicted RBP13.18□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 INCENPQ9NQS7 918 aa13.18□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.18□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 CTDP1Q9Y5B0 961 aaPredicted RBP13.18□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 TACC3Q9Y6A5 838 aa13.18□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 MYADML2A6NDP7 307 aa13.17□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 TMEM232C9JQI7 657 aa13.17□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 SLC3A2P08195 630 aaKnown RBP13.17□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 OAZ1P54368 228 aa13.17□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 IRX5P78411 483 aaPredicted RBP13.17□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 CCSAPQ6IQ19 270 aaPredicted RBP13.17□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 ANKRD35Q8N283 1001 aa13.17□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 KLHDC9Q8NEP7 349 aa13.17□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 CHST13Q8NET6 341 aa13.17□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 TSEN34Q9BSV6 310 aaKnown RBP13.17□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 IL17RBQ9NRM6 502 aa13.17□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.17□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 FBXO40Q9UH90 709 aa13.17□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 ZHX1Q9UKY1 873 aaPredicted RBP13.17□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 FAM184BQ9ULE4 1060 aa13.17□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 ZNF536O15090 1300 aa13.16□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 CLTBP09497 229 aa13.16□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 STAT2P52630 851 aa13.16□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 ACLYP53396 1101 aa13.16□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 CTDSPL2Q05D32 466 aa13.16□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 ACVR2BQ13705 512 aa13.16□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 ANKRD45Q5TZF3 282 aa13.16□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 VPS53Q5VIR6 699 aa13.16□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 RASGRP2Q7LDG7 609 aa13.16□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 CHMP4CQ96CF2 233 aa13.16□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 GMCL1Q96IK5 515 aa13.16□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 GUCD1Q96NT3 240 aa13.16□□□□□ -0.3
APOC4-APOC2-202ENST00000589057 CRBNQ96SW2 442 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms