RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 SOCS7O14512 581 aa17.34■□□□□ 0.37
MBD1-217ENST00000588937 UQCRHP07919 91 aa17.34■□□□□ 0.37
MBD1-217ENST00000588937 SKILP12757 684 aa17.34■□□□□ 0.37
MBD1-217ENST00000588937 NAPAP54920 295 aa17.34■□□□□ 0.37
MBD1-217ENST00000588937 ASPRV1Q53RT3 343 aa17.34■□□□□ 0.37
MBD1-217ENST00000588937 SOGA3Q5TF21 947 aa17.34■□□□□ 0.37
MBD1-217ENST00000588937 TYW1BQ6NUM6 668 aa17.34■□□□□ 0.37
MBD1-217ENST00000588937 KRT25Q7Z3Z0 450 aa17.34■□□□□ 0.37
MBD1-217ENST00000588937 MTMR4Q9NYA4 1195 aa17.34■□□□□ 0.37
MBD1-217ENST00000588937 SERPINB13Q9UIV8 391 aa17.34■□□□□ 0.37
MBD1-217ENST00000588937 A0A087X0B3 334 aa17.33■□□□□ 0.37
MBD1-217ENST00000588937 GOLGA8HP0CJ92 632 aa17.33■□□□□ 0.37
MBD1-217ENST00000588937 SLC35G1Q2M3R5 365 aa17.33■□□□□ 0.37
MBD1-217ENST00000588937 USP17L2Q6R6M4 530 aa17.33■□□□□ 0.37
MBD1-217ENST00000588937 DTHD1Q6ZMT9 781 aa17.33■□□□□ 0.37
MBD1-217ENST00000588937 GRAMD1CQ8IYS0 662 aa17.33■□□□□ 0.37
MBD1-217ENST00000588937 C4orf32Q8N8J7 132 aa17.33■□□□□ 0.37
MBD1-217ENST00000588937 FANCLQ9NW38 375 aa17.33■□□□□ 0.37
MBD1-217ENST00000588937 ATP1A3P13637 1013 aa17.33■□□□□ 0.36
MBD1-217ENST00000588937 AFMP43652 599 aa17.33■□□□□ 0.36
MBD1-217ENST00000588937 DPYDQ12882 1025 aa17.33■□□□□ 0.36
MBD1-217ENST00000588937 CFAP100Q494V2 611 aa17.33■□□□□ 0.36
MBD1-217ENST00000588937 CNKSR1Q969H4 720 aa17.33■□□□□ 0.36
MBD1-217ENST00000588937 SLX4Q8IY92 1834 aa17.32■□□□□ 0.36
MBD1-217ENST00000588937 IGKV6D-41A0A0C4DH26 115 aa17.32■□□□□ 0.36
MBD1-217ENST00000588937 ESYT2A0FGR8 921 aa17.32■□□□□ 0.36
MBD1-217ENST00000588937 TTLL1O95922 423 aa17.32■□□□□ 0.36
MBD1-217ENST00000588937 PDHBP11177 359 aa17.32■□□□□ 0.36
MBD1-217ENST00000588937 SFPQP23246 707 aaKnown RBP eCLIP17.32■□□□□ 0.36
MBD1-217ENST00000588937 PRPHP41219 470 aa17.32■□□□□ 0.36
MBD1-217ENST00000588937 CCZ1BP86790 482 aa17.32■□□□□ 0.36
MBD1-217ENST00000588937 CCZ1P86791 482 aaPredicted RBP17.32■□□□□ 0.36
MBD1-217ENST00000588937 HDLBPQ00341 1268 aaKnown RBP17.32■□□□□ 0.36
MBD1-217ENST00000588937 ORC2Q13416 577 aaPredicted RBP17.32■□□□□ 0.36
MBD1-217ENST00000588937 CDC42EP5Q6NZY7 148 aa17.32■□□□□ 0.36
MBD1-217ENST00000588937 MYRIPQ8NFW9 859 aa17.32■□□□□ 0.36
MBD1-217ENST00000588937 ZDHHC15Q96MV8 337 aa17.32■□□□□ 0.36
MBD1-217ENST00000588937 RIOX1Q9H6W3 641 aa17.32■□□□□ 0.36
MBD1-217ENST00000588937 DDX4Q9NQI0 724 aaKnown RBP17.32■□□□□ 0.36
MBD1-217ENST00000588937 SMCO2A6NFE2 343 aa17.31■□□□□ 0.36
MBD1-217ENST00000588937 DYNC1I1O14576 645 aa17.31■□□□□ 0.36
MBD1-217ENST00000588937 CDK11BP21127 795 aaKnown RBP17.31■□□□□ 0.36
MBD1-217ENST00000588937 CRKP46108 304 aa17.31■□□□□ 0.36
MBD1-217ENST00000588937 SCNN1DP51172 638 aa17.31■□□□□ 0.36
MBD1-217ENST00000588937 E2F4Q16254 413 aa17.31■□□□□ 0.36
MBD1-217ENST00000588937 TPD52L1Q16890 204 aaPredicted RBP17.31■□□□□ 0.36
MBD1-217ENST00000588937 STRIP1Q5VSL9 837 aa17.31■□□□□ 0.36
MBD1-217ENST00000588937 APOBEC3HQ6NTF7 200 aaKnown RBP17.31■□□□□ 0.36
MBD1-217ENST00000588937 RASGRP4Q8TDF6 673 aa17.31■□□□□ 0.36
MBD1-217ENST00000588937 EHD4Q9H223 541 aa17.31■□□□□ 0.36
MBD1-217ENST00000588937 KCND1Q9NSA2 647 aa17.31■□□□□ 0.36
MBD1-217ENST00000588937 NFE2L3Q9Y4A8 694 aa17.31■□□□□ 0.36
MBD1-217ENST00000588937 USP17L5A8MUK1 530 aa17.3■□□□□ 0.36
MBD1-217ENST00000588937 ADAMTS3O15072 1205 aa17.3■□□□□ 0.36
MBD1-217ENST00000588937 GTPBP6O43824 516 aaPredicted RBP17.3■□□□□ 0.36
MBD1-217ENST00000588937 AKR1B1P15121 316 aa17.3■□□□□ 0.36
MBD1-217ENST00000588937 ARID5BQ14865 1188 aa17.3■□□□□ 0.36
MBD1-217ENST00000588937 NONOQ15233 471 aaKnown RBP eCLIP17.3■□□□□ 0.36
MBD1-217ENST00000588937 IL17AQ16552 155 aa17.3■□□□□ 0.36
MBD1-217ENST00000588937 INF2Q27J81 1249 aa17.3■□□□□ 0.36
MBD1-217ENST00000588937 HOMER1Q86YM7 354 aa17.3■□□□□ 0.36
MBD1-217ENST00000588937 C7orf43Q8WVR3 580 aa17.3■□□□□ 0.36
MBD1-217ENST00000588937 CCDC17Q96LX7 622 aa17.3■□□□□ 0.36
MBD1-217ENST00000588937 MTFR1LQ9H019 292 aa17.3■□□□□ 0.36
MBD1-217ENST00000588937 RMND1Q9NWS8 449 aa17.3■□□□□ 0.36
MBD1-217ENST00000588937 SNHG28P0DPA3 235 aa17.3■□□□□ 0.36
MBD1-217ENST00000588937 KCNJ6P48051 423 aa17.3■□□□□ 0.36
MBD1-217ENST00000588937 CC2D2BQ6DHV5 1058 aa17.3■□□□□ 0.36
MBD1-217ENST00000588937 PDXDC2PQ6P474 469 aa17.3■□□□□ 0.36
MBD1-217ENST00000588937 MXD3Q9BW11 206 aa17.3■□□□□ 0.36
MBD1-217ENST00000588937 DHX36Q9H2U1 1008 aaKnown RBP17.3■□□□□ 0.36
MBD1-217ENST00000588937 ZNF18P17022 549 aa17.29■□□□□ 0.36
MBD1-217ENST00000588937 FMR1Q06787 632 aaKnown RBP eCLIP17.29■□□□□ 0.36
MBD1-217ENST00000588937 GRIPAP1Q4V328 841 aa17.29■□□□□ 0.36
MBD1-217ENST00000588937 VSTM4Q8IW00 320 aa17.29■□□□□ 0.36
MBD1-217ENST00000588937 CCDC112Q8NEF3 446 aa17.29■□□□□ 0.36
MBD1-217ENST00000588937 AK8Q96MA6 479 aa17.29■□□□□ 0.36
MBD1-217ENST00000588937 PIGSQ96S52 555 aa17.29■□□□□ 0.36
MBD1-217ENST00000588937 DBNDD1Q9H9R9 158 aa17.29■□□□□ 0.36
MBD1-217ENST00000588937 VAT1LQ9HCJ6 419 aa17.29■□□□□ 0.36
MBD1-217ENST00000588937 MYL1P05976 194 aa17.28■□□□□ 0.36
MBD1-217ENST00000588937 SHMT1P34896 483 aa17.28■□□□□ 0.36
MBD1-217ENST00000588937 STAT6P42226 847 aa17.28■□□□□ 0.36
MBD1-217ENST00000588937 SEMA3FQ13275 785 aa17.28■□□□□ 0.36
MBD1-217ENST00000588937 SPATA1Q5VX52 437 aa17.28■□□□□ 0.36
MBD1-217ENST00000588937 NEK8Q86SG6 692 aa17.28■□□□□ 0.36
MBD1-217ENST00000588937 CCSER1Q9C0I3 900 aa17.28■□□□□ 0.36
MBD1-217ENST00000588937 ECE2O60344 883 aa17.28■□□□□ 0.36
MBD1-217ENST00000588937 NPM3O75607 178 aaKnown RBP17.28■□□□□ 0.36
MBD1-217ENST00000588937 TNNT1P13805 278 aa17.28■□□□□ 0.36
MBD1-217ENST00000588937 UBA7P41226 1012 aa17.28■□□□□ 0.36
MBD1-217ENST00000588937 GPATCH4Q5T3I0 446 aaKnown RBP17.28■□□□□ 0.36
MBD1-217ENST00000588937 PPP1R18Q6NYC8 613 aa17.28■□□□□ 0.36
MBD1-217ENST00000588937 ARMCX5Q6P1M9 558 aa17.28■□□□□ 0.36
MBD1-217ENST00000588937 REXO1Q8N1G1 1221 aaKnown RBP17.28■□□□□ 0.36
MBD1-217ENST00000588937 LRRC47Q8N1G4 583 aaKnown RBP17.28■□□□□ 0.36
MBD1-217ENST00000588937 SUPT20HQ8NEM7 779 aa17.28■□□□□ 0.36
MBD1-217ENST00000588937 DPF2Q92785 391 aa17.28■□□□□ 0.36
MBD1-217ENST00000588937 CPVLQ9H3G5 476 aa17.28■□□□□ 0.36
MBD1-217ENST00000588937 MAGEF1Q9HAY2 307 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms