RNA–Protein interactions for RNA: ENST00000588468.1

CNN1-207, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-207ENST00000588468 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.75□□□□□ -0.53
CNN1-207ENST00000588468 CENPQQ7L2Z9 268 aaPredicted RBP11.75□□□□□ -0.53
CNN1-207ENST00000588468 FAM160B2Q86V87 743 aa11.75□□□□□ -0.53
CNN1-207ENST00000588468 NBPF3Q9H094 633 aa11.75□□□□□ -0.53
CNN1-207ENST00000588468 IL17RBQ9NRM6 502 aa11.75□□□□□ -0.53
CNN1-207ENST00000588468 TACC3Q9Y6A5 838 aa11.75□□□□□ -0.53
CNN1-207ENST00000588468 DNAH12Q6ZR08 3092 aa11.75□□□□□ -0.53
CNN1-207ENST00000588468 MYH6P13533 1939 aa11.74□□□□□ -0.53
CNN1-207ENST00000588468 MCM3APO60318 1980 aa11.74□□□□□ -0.53
CNN1-207ENST00000588468 ZNF213O14771 459 aa11.74□□□□□ -0.53
CNN1-207ENST00000588468 ZBED4O75132 1171 aa11.74□□□□□ -0.53
CNN1-207ENST00000588468 IGHA2P01877 340 aa11.74□□□□□ -0.53
CNN1-207ENST00000588468 TOP1P11387 765 aaKnown RBP11.74□□□□□ -0.53
CNN1-207ENST00000588468 STAT3P40763 770 aa11.74□□□□□ -0.53
CNN1-207ENST00000588468 SLC1A4P43007 532 aa11.74□□□□□ -0.53
CNN1-207ENST00000588468 CACNB2Q08289 660 aaPredicted RBP11.74□□□□□ -0.53
CNN1-207ENST00000588468 TRIM32Q13049 653 aa11.74□□□□□ -0.53
CNN1-207ENST00000588468 CCL14Q16627 93 aa11.74□□□□□ -0.53
CNN1-207ENST00000588468 IMMTQ16891 758 aaKnown RBP11.74□□□□□ -0.53
CNN1-207ENST00000588468 RRP12Q5JTH9 1297 aaKnown RBP11.74□□□□□ -0.53
CNN1-207ENST00000588468 DPP9Q86TI2 863 aa11.74□□□□□ -0.53
CNN1-207ENST00000588468 CHURC1Q8WUH1 139 aa11.74□□□□□ -0.53
CNN1-207ENST00000588468 DCAF4Q8WV16 495 aa11.74□□□□□ -0.53
CNN1-207ENST00000588468 ESR2Q92731 530 aa11.74□□□□□ -0.53
CNN1-207ENST00000588468 SLC38A10Q9HBR0 1119 aa11.74□□□□□ -0.53
CNN1-207ENST00000588468 CTDP1Q9Y5B0 961 aaPredicted RBP11.74□□□□□ -0.53
CNN1-207ENST00000588468 NEDD4P46934 1319 aa11.74□□□□□ -0.53
CNN1-207ENST00000588468 LRRC37A2A6NM11 1700 aa11.73□□□□□ -0.53
CNN1-207ENST00000588468 NMT2O60551 498 aa11.73□□□□□ -0.53
CNN1-207ENST00000588468 MSCO60682 206 aa11.73□□□□□ -0.53
CNN1-207ENST00000588468 KCTD2Q14681 263 aa11.73□□□□□ -0.53
CNN1-207ENST00000588468 CCDC178Q5BJE1 867 aa11.73□□□□□ -0.53
CNN1-207ENST00000588468 SNRNP48Q6IEG0 339 aaKnown RBP11.73□□□□□ -0.53
CNN1-207ENST00000588468 RCSD1Q6JBY9 416 aa11.73□□□□□ -0.53
CNN1-207ENST00000588468 KIFC2Q96AC6 838 aa11.73□□□□□ -0.53
CNN1-207ENST00000588468 TTC14Q96N46 770 aa11.73□□□□□ -0.53
CNN1-207ENST00000588468 MMP19Q99542 508 aa11.73□□□□□ -0.53
CNN1-207ENST00000588468 HTATIP2Q9BUP3 242 aa11.73□□□□□ -0.53
CNN1-207ENST00000588468 CNNM2Q9H8M5 875 aa11.73□□□□□ -0.53
CNN1-207ENST00000588468 INCENPQ9NQS7 918 aa11.73□□□□□ -0.53
CNN1-207ENST00000588468 FBXO40Q9UH90 709 aa11.73□□□□□ -0.53
CNN1-207ENST00000588468 OGDHLQ9ULD0 1010 aa11.73□□□□□ -0.53
CNN1-207ENST00000588468 ISY1Q9ULR0 285 aaKnown RBP11.73□□□□□ -0.53
CNN1-207ENST00000588468 TMEM232C9JQI7 657 aa11.72□□□□□ -0.53
CNN1-207ENST00000588468 TFRCP02786 760 aaKnown RBP11.72□□□□□ -0.53
CNN1-207ENST00000588468 CYBAP13498 195 aa11.72□□□□□ -0.53
CNN1-207ENST00000588468 CHMLP26374 656 aa11.72□□□□□ -0.53
CNN1-207ENST00000588468 IKQ13123 557 aaPredicted RBP11.72□□□□□ -0.53
CNN1-207ENST00000588468 IQCA1Q86XH1 822 aa11.72□□□□□ -0.53
CNN1-207ENST00000588468 NPLOC4Q8TAT6 608 aa11.72□□□□□ -0.53
CNN1-207ENST00000588468 FLRT1Q9NZU1 646 aa11.72□□□□□ -0.53
CNN1-207ENST00000588468 NRBP1Q9UHY1 535 aa11.72□□□□□ -0.53
CNN1-207ENST00000588468 DIS3Q9Y2L1 958 aaKnown RBP11.72□□□□□ -0.53
CNN1-207ENST00000588468 LCTP09848 1927 aa11.72□□□□□ -0.53
CNN1-207ENST00000588468 SMCHD1A6NHR9 2005 aa11.71□□□□□ -0.53
CNN1-207ENST00000588468 COBLO75128 1261 aa11.71□□□□□ -0.53
CNN1-207ENST00000588468 MCCP23508 829 aa11.71□□□□□ -0.53
CNN1-207ENST00000588468 CCND3P30281 292 aaPredicted RBP11.71□□□□□ -0.53
CNN1-207ENST00000588468 CCDC96Q2M329 555 aa11.71□□□□□ -0.53
CNN1-207ENST00000588468 NECAB2Q7Z6G3 386 aa11.71□□□□□ -0.53
CNN1-207ENST00000588468 CHST13Q8NET6 341 aa11.71□□□□□ -0.53
CNN1-207ENST00000588468 MAML3Q96JK9 1138 aa11.71□□□□□ -0.53
CNN1-207ENST00000588468 TMEM47Q9BQJ4 181 aa11.71□□□□□ -0.53
CNN1-207ENST00000588468 KRT23Q9C075 422 aa11.71□□□□□ -0.53
CNN1-207ENST00000588468 IL25Q9H293 177 aa11.71□□□□□ -0.53
CNN1-207ENST00000588468 SGSM2O43147 1006 aa11.7□□□□□ -0.54
CNN1-207ENST00000588468 SNHG28P0DPA3 235 aa11.7□□□□□ -0.54
CNN1-207ENST00000588468 CYP2C19P33261 490 aa11.7□□□□□ -0.54
CNN1-207ENST00000588468 ZNF792Q3KQV3 632 aa11.7□□□□□ -0.54
CNN1-207ENST00000588468 TKFCQ3LXA3 575 aa11.7□□□□□ -0.54
CNN1-207ENST00000588468 BTNL9Q6UXG8 535 aa11.7□□□□□ -0.54
CNN1-207ENST00000588468 KCTD1Q719H9 257 aa11.7□□□□□ -0.54
CNN1-207ENST00000588468 ZNF467Q7Z7K2 595 aaPredicted RBP11.7□□□□□ -0.54
CNN1-207ENST00000588468 DGKHQ86XP1 1220 aa11.7□□□□□ -0.54
CNN1-207ENST00000588468 CPXCR1Q8N123 301 aa11.7□□□□□ -0.54
CNN1-207ENST00000588468 MSL3Q8N5Y2 521 aaKnown RBP11.7□□□□□ -0.54
CNN1-207ENST00000588468 RAVER2Q9HCJ3 691 aaKnown RBP11.7□□□□□ -0.54
CNN1-207ENST00000588468 DDX20Q9UHI6 824 aaKnown RBP11.7□□□□□ -0.54
CNN1-207ENST00000588468 PNMA2Q9UL42 364 aa11.7□□□□□ -0.54
CNN1-207ENST00000588468 U3KPZ7 1027 aaPredicted RBP11.7□□□□□ -0.54
CNN1-207ENST00000588468 SYNGAP1Q96PV0 1343 aa11.69□□□□□ -0.54
CNN1-207ENST00000588468 DNAJC25-GNG10A0A024R161 153 aa11.69□□□□□ -0.54
CNN1-207ENST00000588468 B4E1Z4 1266 aa11.69□□□□□ -0.54
CNN1-207ENST00000588468 SEPT4O43236 478 aa11.69□□□□□ -0.54
CNN1-207ENST00000588468 KDM4AO75164 1064 aa11.69□□□□□ -0.54
CNN1-207ENST00000588468 PDHBP11177 359 aa11.69□□□□□ -0.54
CNN1-207ENST00000588468 BMP2KLQ5H9B9 411 aa11.69□□□□□ -0.54
CNN1-207ENST00000588468 GPATCH4Q5T3I0 446 aaKnown RBP11.69□□□□□ -0.54
CNN1-207ENST00000588468 SYDE2Q5VT97 1194 aa11.69□□□□□ -0.54
CNN1-207ENST00000588468 LHX8Q68G74 356 aa11.69□□□□□ -0.54
CNN1-207ENST00000588468 RASGRP2Q7LDG7 609 aa11.69□□□□□ -0.54
CNN1-207ENST00000588468 ANKS1AQ92625 1134 aa11.69□□□□□ -0.54
CNN1-207ENST00000588468 TINF2Q9BSI4 451 aa11.69□□□□□ -0.54
CNN1-207ENST00000588468 ACAD9Q9H845 621 aa11.69□□□□□ -0.54
CNN1-207ENST00000588468 PRR12Q9ULL5 1215 aa11.69□□□□□ -0.54
CNN1-207ENST00000588468 RIPK3Q9Y572 518 aa11.69□□□□□ -0.54
CNN1-207ENST00000588468 TRIOBPQ9H2D6 2365 aa11.69□□□□□ -0.54
CNN1-207ENST00000588468 PFASO15067 1338 aa11.68□□□□□ -0.54
CNN1-207ENST00000588468 ZNF536O15090 1300 aa11.68□□□□□ -0.54
CNN1-207ENST00000588468 ICAM1P05362 532 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms