RNA–Protein interactions for RNA: ENST00000588259.5

TMED1-203, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-203ENST00000588259 REPS2Q8NFH8 660 aa20.17■□□□□ 0.82
TMED1-203ENST00000588259 PI4K2BQ8TCG2 481 aa20.17■□□□□ 0.82
TMED1-203ENST00000588259 TINF2Q9BSI4 451 aa20.17■□□□□ 0.82
TMED1-203ENST00000588259 CNPY2Q9Y2B0 182 aa20.17■□□□□ 0.82
TMED1-203ENST00000588259 ZNF792Q3KQV3 632 aa20.16■□□□□ 0.82
TMED1-203ENST00000588259 TRIM60Q495X7 471 aa20.16■□□□□ 0.82
TMED1-203ENST00000588259 SLC39A5Q6ZMH5 540 aa20.16■□□□□ 0.82
TMED1-203ENST00000588259 Q7L0L9 218 aa20.16■□□□□ 0.82
TMED1-203ENST00000588259 CHMP4CQ96CF2 233 aa20.16■□□□□ 0.82
TMED1-203ENST00000588259 LTBP2Q14767 1821 aa20.16■□□□□ 0.82
TMED1-203ENST00000588259 TTLL1O95922 423 aa20.15■□□□□ 0.82
TMED1-203ENST00000588259 TAL1P17542 331 aaPredicted RBP20.15■□□□□ 0.82
TMED1-203ENST00000588259 RRP1P56182 461 aaKnown RBP20.15■□□□□ 0.82
TMED1-203ENST00000588259 IKQ13123 557 aaPredicted RBP20.15■□□□□ 0.82
TMED1-203ENST00000588259 LENG1Q96BZ8 264 aaPredicted RBP20.15■□□□□ 0.82
TMED1-203ENST00000588259 RAVER2Q9HCJ3 691 aaKnown RBP20.15■□□□□ 0.82
TMED1-203ENST00000588259 MTMR4Q9NYA4 1195 aa20.15■□□□□ 0.82
TMED1-203ENST00000588259 NRBP1Q9UHY1 535 aa20.15■□□□□ 0.82
TMED1-203ENST00000588259 DIS3Q9Y2L1 958 aaKnown RBP20.15■□□□□ 0.82
TMED1-203ENST00000588259 IGKV6D-41A0A0C4DH26 115 aa20.14■□□□□ 0.81
TMED1-203ENST00000588259 PGK1P00558 417 aa20.14■□□□□ 0.81
TMED1-203ENST00000588259 PPARAQ07869 468 aa20.14■□□□□ 0.81
TMED1-203ENST00000588259 ZMYM1Q5SVZ6 1142 aa20.14■□□□□ 0.81
TMED1-203ENST00000588259 RNF180Q86T96 592 aa20.14■□□□□ 0.81
TMED1-203ENST00000588259 FEM1BQ9UK73 627 aa20.14■□□□□ 0.81
TMED1-203ENST00000588259 RIPK3Q9Y572 518 aa20.14■□□□□ 0.81
TMED1-203ENST00000588259 MCM3APO60318 1980 aa20.14■□□□□ 0.81
TMED1-203ENST00000588259 AKR1A1P14550 325 aa20.13■□□□□ 0.81
TMED1-203ENST00000588259 TFAP4Q01664 338 aa20.13■□□□□ 0.81
TMED1-203ENST00000588259 ANKRD45Q5TZF3 282 aa20.13■□□□□ 0.81
TMED1-203ENST00000588259 SLFN13Q68D06 897 aa20.13■□□□□ 0.81
TMED1-203ENST00000588259 GPR153Q6NV75 609 aa20.13■□□□□ 0.81
TMED1-203ENST00000588259 CCDC129Q6ZRS4 1044 aa20.13■□□□□ 0.81
TMED1-203ENST00000588259 HOMER2Q9NSB8 354 aa20.13■□□□□ 0.81
TMED1-203ENST00000588259 ZHX1Q9UKY1 873 aaPredicted RBP20.13■□□□□ 0.81
TMED1-203ENST00000588259 PLIN4Q96Q06 1357 aa20.12■□□□□ 0.81
TMED1-203ENST00000588259 BMP3P12645 472 aa20.12■□□□□ 0.81
TMED1-203ENST00000588259 ANKRD35Q8N283 1001 aa20.12■□□□□ 0.81
TMED1-203ENST00000588259 SLC17A8Q8NDX2 589 aa20.12■□□□□ 0.81
TMED1-203ENST00000588259 GMCL1P1Q8NEA9 526 aa20.12■□□□□ 0.81
TMED1-203ENST00000588259 NEDD1Q8NHV4 660 aa20.12■□□□□ 0.81
TMED1-203ENST00000588259 CRBNQ96SW2 442 aa20.12■□□□□ 0.81
TMED1-203ENST00000588259 MKL1Q969V6 931 aa20.11■□□□□ 0.81
TMED1-203ENST00000588259 SLC38A10Q9HBR0 1119 aa20.11■□□□□ 0.81
TMED1-203ENST00000588259 SYNPO2Q9UMS6 1093 aa20.11■□□□□ 0.81
TMED1-203ENST00000588259 PHF24Q9UPV7 400 aa20.11■□□□□ 0.81
TMED1-203ENST00000588259 TSPY2A6NKD2 308 aa20.1■□□□□ 0.81
TMED1-203ENST00000588259 TMEM232C9JQI7 657 aa20.1■□□□□ 0.81
TMED1-203ENST00000588259 ZNF865P0CJ78 1059 aaPredicted RBP20.1■□□□□ 0.81
TMED1-203ENST00000588259 TLE2Q04725 743 aa20.1■□□□□ 0.81
TMED1-203ENST00000588259 CTDSPL2Q05D32 466 aa20.1■□□□□ 0.81
TMED1-203ENST00000588259 PDLIM7Q9NR12 457 aa20.1■□□□□ 0.81
TMED1-203ENST00000588259 FBXO40Q9UH90 709 aa20.1■□□□□ 0.81
TMED1-203ENST00000588259 STX8Q9UNK0 236 aa20.1■□□□□ 0.81
TMED1-203ENST00000588259 MTMR7Q9Y216 660 aa20.1■□□□□ 0.81
TMED1-203ENST00000588259 SYNGAP1Q96PV0 1343 aa20.09■□□□□ 0.81
TMED1-203ENST00000588259 ATP2A1O14983 1001 aa20.09■□□□□ 0.81
TMED1-203ENST00000588259 PQBP1O60828 265 aaKnown RBP20.09■□□□□ 0.81
TMED1-203ENST00000588259 SLC1A4P43007 532 aa20.09■□□□□ 0.81
TMED1-203ENST00000588259 STAT2P52630 851 aa20.09■□□□□ 0.81
TMED1-203ENST00000588259 SNX17Q15036 470 aa20.09■□□□□ 0.81
TMED1-203ENST00000588259 MSL3Q8N5Y2 521 aaKnown RBP20.09■□□□□ 0.81
TMED1-203ENST00000588259 BADQ92934 168 aa20.09■□□□□ 0.81
TMED1-203ENST00000588259 FAM184BQ9ULE4 1060 aa20.09■□□□□ 0.81
TMED1-203ENST00000588259 SYNRGQ9UMZ2 1314 aa20.08■□□□□ 0.81
TMED1-203ENST00000588259 DNAJC25-GNG10A0A024R161 153 aa20.08■□□□□ 0.81
TMED1-203ENST00000588259 A0A1W2PQ45 241 aaPredicted RBP20.08■□□□□ 0.81
TMED1-203ENST00000588259 A0A1W2PQY0 241 aa20.08■□□□□ 0.81
TMED1-203ENST00000588259 RANBP6O60518 1105 aaKnown RBP20.08■□□□□ 0.81
TMED1-203ENST00000588259 PPP4R3BQ5MIZ7 849 aa20.08■□□□□ 0.81
TMED1-203ENST00000588259 SH3RF1Q7Z6J0 888 aa20.08■□□□□ 0.81
TMED1-203ENST00000588259 CHST13Q8NET6 341 aa20.08■□□□□ 0.81
TMED1-203ENST00000588259 TOMM22Q9NS69 142 aa20.08■□□□□ 0.81
TMED1-203ENST00000588259 MTMR10Q9NXD2 777 aa20.08■□□□□ 0.81
TMED1-203ENST00000588259 SNAI1O95863 264 aaPredicted RBP20.07■□□□□ 0.8
TMED1-203ENST00000588259 MCCP23508 829 aa20.07■□□□□ 0.8
TMED1-203ENST00000588259 OAZ1P54368 228 aa20.07■□□□□ 0.8
TMED1-203ENST00000588259 FAM160B2Q86V87 743 aa20.07■□□□□ 0.8
TMED1-203ENST00000588259 CHURC1Q8WUH1 139 aa20.07■□□□□ 0.8
TMED1-203ENST00000588259 EVI5LQ96CN4 794 aa20.07■□□□□ 0.8
TMED1-203ENST00000588259 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.07■□□□□ 0.8
TMED1-203ENST00000588259 TRIM43BA6NCK2 446 aa20.06■□□□□ 0.8
TMED1-203ENST00000588259 NMT2O60551 498 aa20.06■□□□□ 0.8
TMED1-203ENST00000588259 CLTBP09497 229 aa20.06■□□□□ 0.8
TMED1-203ENST00000588259 SHHQ15465 462 aa20.06■□□□□ 0.8
TMED1-203ENST00000588259 CCDC96Q2M329 555 aa20.06■□□□□ 0.8
TMED1-203ENST00000588259 VPS53Q5VIR6 699 aa20.06■□□□□ 0.8
TMED1-203ENST00000588259 CCDC174Q6PII3 467 aa20.06■□□□□ 0.8
TMED1-203ENST00000588259 KCTD1Q719H9 257 aa20.06■□□□□ 0.8
TMED1-203ENST00000588259 ZNF467Q7Z7K2 595 aaPredicted RBP20.06■□□□□ 0.8
TMED1-203ENST00000588259 TRIM43Q96BQ3 446 aaPredicted RBP20.06■□□□□ 0.8
TMED1-203ENST00000588259 GMCL1Q96IK5 515 aa20.06■□□□□ 0.8
TMED1-203ENST00000588259 FAM161BQ96MY7 647 aa20.06■□□□□ 0.8
TMED1-203ENST00000588259 ACAD9Q9H845 621 aa20.06■□□□□ 0.8
TMED1-203ENST00000588259 INCENPQ9NQS7 918 aa20.06■□□□□ 0.8
TMED1-203ENST00000588259 STARD7Q9NQZ5 370 aa20.06■□□□□ 0.8
TMED1-203ENST00000588259 RNF146Q9NTX7 359 aa20.06■□□□□ 0.8
TMED1-203ENST00000588259 COL6A3P12111 3177 aa20.06■□□□□ 0.8
TMED1-203ENST00000588259 SALL3Q9BXA9 1300 aa20.05■□□□□ 0.8
TMED1-203ENST00000588259 POTEB2H3BUK9 544 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms