RNA–Protein interactions for RNA: ENST00000587509.5

PRKCSH-206, Transcript of protein kinase C substrate 80K-H, human

TSL 4

Gene PRKCSH, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCSH-206	ENST00000587509	PRKAR2A	P13861	404 aa	Known RBP	13.79	□□□□□ -0.2
PRKCSH-206	ENST00000587509	ADORA2A	P29274	412 aa		13.79	□□□□□ -0.2
PRKCSH-206	ENST00000587509	TMEM132B	Q14DG7	1078 aa		13.79	□□□□□ -0.2
PRKCSH-206	ENST00000587509	MTFR1	Q15390	333 aa		13.79	□□□□□ -0.2
PRKCSH-206	ENST00000587509	SNRNP48	Q6IEG0	339 aa	Known RBP	13.79	□□□□□ -0.2
PRKCSH-206	ENST00000587509	RALYL	Q86SE5	291 aa	Known RBP	13.79	□□□□□ -0.2
PRKCSH-206	ENST00000587509	U2AF1L4	Q8WU68	220 aa	Known RBP	13.79	□□□□□ -0.2
PRKCSH-206	ENST00000587509	USP6NL	Q92738	828 aa		13.79	□□□□□ -0.2
PRKCSH-206	ENST00000587509	MMP19	Q99542	508 aa		13.79	□□□□□ -0.2
PRKCSH-206	ENST00000587509	UNC93B1	Q9H1C4	597 aa		13.79	□□□□□ -0.2
PRKCSH-206	ENST00000587509	PAK6	Q9NQU5	681 aa	Predicted RBP	13.79	□□□□□ -0.2
PRKCSH-206	ENST00000587509	CENPF	P49454	3210 aa		13.79	□□□□□ -0.2
PRKCSH-206	ENST00000587509	NEDD4	P46934	1319 aa		13.79	□□□□□ -0.2
PRKCSH-206	ENST00000587509	PLXNB2	O15031	1838 aa		13.78	□□□□□ -0.2
PRKCSH-206	ENST00000587509	RLF	Q13129	1914 aa		13.78	□□□□□ -0.2
PRKCSH-206	ENST00000587509	TMEM232	C9JQI7	657 aa		13.78	□□□□□ -0.2
PRKCSH-206	ENST00000587509	SGSM2	O43147	1006 aa		13.78	□□□□□ -0.2
PRKCSH-206	ENST00000587509	PLA2G6	O60733	806 aa		13.78	□□□□□ -0.2
PRKCSH-206	ENST00000587509	SART3	Q15020	963 aa	Known RBP	13.78	□□□□□ -0.2
PRKCSH-206	ENST00000587509	OLFML2B	Q68BL8	750 aa		13.78	□□□□□ -0.2
PRKCSH-206	ENST00000587509	DGKH	Q86XP1	1220 aa		13.78	□□□□□ -0.2
PRKCSH-206	ENST00000587509	KAT14	Q9H8E8	782 aa		13.78	□□□□□ -0.2
PRKCSH-206	ENST00000587509	SLC38A10	Q9HBR0	1119 aa		13.78	□□□□□ -0.2
PRKCSH-206	ENST00000587509	IL17RB	Q9NRM6	502 aa		13.78	□□□□□ -0.2
PRKCSH-206	ENST00000587509	ZNF214	Q9UL59	606 aa	Predicted RBP	13.78	□□□□□ -0.2
PRKCSH-206	ENST00000587509	PDE4DIP	Q5VU43	2346 aa		13.78	□□□□□ -0.2
PRKCSH-206	ENST00000587509	ERICH2	A1L162	156 aa		13.77	□□□□□ -0.21
PRKCSH-206	ENST00000587509	NMT2	O60551	498 aa		13.77	□□□□□ -0.21
PRKCSH-206	ENST00000587509	KDM4A	O75164	1064 aa		13.77	□□□□□ -0.21
PRKCSH-206	ENST00000587509	FARP2	O94887	1054 aa	Predicted RBP	13.77	□□□□□ -0.21
PRKCSH-206	ENST00000587509	SGPL1	O95470	568 aa		13.77	□□□□□ -0.21
PRKCSH-206	ENST00000587509	EN2	P19622	333 aa	Predicted RBP	13.77	□□□□□ -0.21
PRKCSH-206	ENST00000587509	MCC	P23508	829 aa		13.77	□□□□□ -0.21
PRKCSH-206	ENST00000587509	NOV	P48745	357 aa		13.77	□□□□□ -0.21
PRKCSH-206	ENST00000587509	TKFC	Q3LXA3	575 aa		13.77	□□□□□ -0.21
PRKCSH-206	ENST00000587509	GPATCH4	Q5T3I0	446 aa	Known RBP	13.77	□□□□□ -0.21
PRKCSH-206	ENST00000587509	ERICH6B	Q5W0A0	696 aa		13.77	□□□□□ -0.21
PRKCSH-206	ENST00000587509	POTEE	Q6S8J3	1075 aa		13.77	□□□□□ -0.21
PRKCSH-206	ENST00000587509	ANKLE1	Q8NAG6	615 aa		13.77	□□□□□ -0.21
PRKCSH-206	ENST00000587509	CHST13	Q8NET6	341 aa		13.77	□□□□□ -0.21
PRKCSH-206	ENST00000587509	DEFB118	Q96PH6	123 aa		13.77	□□□□□ -0.21
PRKCSH-206	ENST00000587509	HTATIP2	Q9BUP3	242 aa		13.77	□□□□□ -0.21
PRKCSH-206	ENST00000587509	MTMR7	Q9Y216	660 aa		13.77	□□□□□ -0.21
PRKCSH-206	ENST00000587509	DOCK3	Q8IZD9	2030 aa		13.76	□□□□□ -0.21
PRKCSH-206	ENST00000587509	TFRC	P02786	760 aa	Known RBP	13.76	□□□□□ -0.21
PRKCSH-206	ENST00000587509	MAP3K21	Q5TCX8	1036 aa		13.76	□□□□□ -0.21
PRKCSH-206	ENST00000587509	CPXCR1	Q8N123	301 aa		13.76	□□□□□ -0.21
PRKCSH-206	ENST00000587509	REPS2	Q8NFH8	660 aa		13.76	□□□□□ -0.21
PRKCSH-206	ENST00000587509	DDX11	Q96FC9	970 aa		13.76	□□□□□ -0.21
PRKCSH-206	ENST00000587509	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	13.76	□□□□□ -0.21
PRKCSH-206	ENST00000587509	TMEM47	Q9BQJ4	181 aa		13.76	□□□□□ -0.21
PRKCSH-206	ENST00000587509	NBPF3	Q9H094	633 aa		13.76	□□□□□ -0.21
PRKCSH-206	ENST00000587509	TNKS	O95271	1327 aa		13.75	□□□□□ -0.21
PRKCSH-206	ENST00000587509		B4E1Z4	1266 aa		13.75	□□□□□ -0.21
PRKCSH-206	ENST00000587509	KCTD1	Q719H9	257 aa		13.75	□□□□□ -0.21
PRKCSH-206	ENST00000587509	MSL3	Q8N5Y2	521 aa	Known RBP	13.75	□□□□□ -0.21
PRKCSH-206	ENST00000587509	ACAD9	Q9H845	621 aa		13.75	□□□□□ -0.21
PRKCSH-206	ENST00000587509	INCENP	Q9NQS7	918 aa		13.75	□□□□□ -0.21
PRKCSH-206	ENST00000587509	NRBP1	Q9UHY1	535 aa		13.75	□□□□□ -0.21
PRKCSH-206	ENST00000587509	DIS3	Q9Y2L1	958 aa	Known RBP	13.75	□□□□□ -0.21
PRKCSH-206	ENST00000587509	COL11A1	P12107	1806 aa	Predicted RBP	13.74	□□□□□ -0.21
PRKCSH-206	ENST00000587509	PFAS	O15067	1338 aa		13.74	□□□□□ -0.21
PRKCSH-206	ENST00000587509	BRCA2	P51587	3418 aa		13.74	□□□□□ -0.21
PRKCSH-206	ENST00000587509	CDC45	O75419	566 aa		13.74	□□□□□ -0.21
PRKCSH-206	ENST00000587509	PDHB	P11177	359 aa		13.74	□□□□□ -0.21
PRKCSH-206	ENST00000587509	SLC4A3	P48751	1232 aa		13.74	□□□□□ -0.21
PRKCSH-206	ENST00000587509	CACNB2	Q08289	660 aa	Predicted RBP	13.74	□□□□□ -0.21
PRKCSH-206	ENST00000587509	CCL14	Q16627	93 aa		13.74	□□□□□ -0.21
PRKCSH-206	ENST00000587509	IFIT1B	Q5T764	474 aa	Known RBP	13.74	□□□□□ -0.21
PRKCSH-206	ENST00000587509	PRPF38B	Q5VTL8	546 aa	Known RBP	13.74	□□□□□ -0.21
PRKCSH-206	ENST00000587509	RNF20	Q5VTR2	975 aa		13.74	□□□□□ -0.21
PRKCSH-206	ENST00000587509	ANKRD35	Q8N283	1001 aa		13.74	□□□□□ -0.21
PRKCSH-206	ENST00000587509	PNMA1	Q8ND90	353 aa		13.74	□□□□□ -0.21
PRKCSH-206	ENST00000587509	NCOA7	Q8NI08	942 aa		13.74	□□□□□ -0.21
PRKCSH-206	ENST00000587509	SHISA4	Q96DD7	197 aa		13.74	□□□□□ -0.21
PRKCSH-206	ENST00000587509	RAVER2	Q9HCJ3	691 aa	Known RBP	13.74	□□□□□ -0.21
PRKCSH-206	ENST00000587509	CNPY2	Q9Y2B0	182 aa		13.74	□□□□□ -0.21
PRKCSH-206	ENST00000587509	ICAM1	P05362	532 aa		13.73	□□□□□ -0.21
PRKCSH-206	ENST00000587509	CNGA1	P29973	690 aa		13.73	□□□□□ -0.21
PRKCSH-206	ENST00000587509	ZNF543	Q08ER8	600 aa		13.73	□□□□□ -0.21
PRKCSH-206	ENST00000587509	ASPRV1	Q53RT3	343 aa		13.73	□□□□□ -0.21
PRKCSH-206	ENST00000587509	SYDE2	Q5VT97	1194 aa		13.73	□□□□□ -0.21
PRKCSH-206	ENST00000587509	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
PRKCSH-206	ENST00000587509	MAML3	Q96JK9	1138 aa		13.73	□□□□□ -0.21
PRKCSH-206	ENST00000587509	ESYT1	Q9BSJ8	1104 aa		13.73	□□□□□ -0.21
PRKCSH-206	ENST00000587509	CRISPLD2	Q9H0B8	497 aa		13.73	□□□□□ -0.21
PRKCSH-206	ENST00000587509	ANO2	Q9NQ90	1003 aa		13.73	□□□□□ -0.21
PRKCSH-206	ENST00000587509	CCPG1	Q9ULG6	757 aa		13.73	□□□□□ -0.21
PRKCSH-206	ENST00000587509	PRR12	Q9ULL5	1215 aa		13.73	□□□□□ -0.21
PRKCSH-206	ENST00000587509	TACC3	Q9Y6A5	838 aa		13.73	□□□□□ -0.21
PRKCSH-206	ENST00000587509	FRMPD2	Q68DX3	1309 aa	Predicted RBP	13.72	□□□□□ -0.21
PRKCSH-206	ENST00000587509	BTNL9	Q6UXG8	535 aa		13.72	□□□□□ -0.21
PRKCSH-206	ENST00000587509	NECAB2	Q7Z6G3	386 aa		13.72	□□□□□ -0.21
PRKCSH-206	ENST00000587509	ENAH	Q8N8S7	591 aa	Predicted RBP	13.72	□□□□□ -0.21
PRKCSH-206	ENST00000587509	NPLOC4	Q8TAT6	608 aa		13.72	□□□□□ -0.21
PRKCSH-206	ENST00000587509	MAP4K1	Q92918	833 aa		13.72	□□□□□ -0.21
PRKCSH-206	ENST00000587509	ZKSCAN3	Q9BRR0	538 aa		13.72	□□□□□ -0.21
PRKCSH-206	ENST00000587509	IL25	Q9H293	177 aa		13.72	□□□□□ -0.21
PRKCSH-206	ENST00000587509	HOMER2	Q9NSB8	354 aa		13.72	□□□□□ -0.21
PRKCSH-206	ENST00000587509	RNF146	Q9NTX7	359 aa		13.72	□□□□□ -0.21

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