RNA–Protein interactions for RNA: ENST00000587220.5

ZNF540-205, Transcript of zinc finger protein 540, humanhuman

TSL 2

Gene ZNF540, Length 576 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-205ENST00000587220 SEPT4O43236 478 aa12.64□□□□□ -0.39
ZNF540-205ENST00000587220 COL6A1P12109 1028 aa12.64□□□□□ -0.39
ZNF540-205ENST00000587220 SYN1P17600 705 aa12.64□□□□□ -0.39
ZNF540-205ENST00000587220 CTDSPL2Q05D32 466 aa12.64□□□□□ -0.39
ZNF540-205ENST00000587220 ANO1Q5XXA6 986 aa12.64□□□□□ -0.39
ZNF540-205ENST00000587220 SLFN13Q68D06 897 aa12.64□□□□□ -0.39
ZNF540-205ENST00000587220 MKL1Q969V6 931 aa12.64□□□□□ -0.39
ZNF540-205ENST00000587220 RILPL2Q969X0 211 aa12.64□□□□□ -0.39
ZNF540-205ENST00000587220 DDX11Q96FC9 970 aa12.64□□□□□ -0.39
ZNF540-205ENST00000587220 TOMM22Q9NS69 142 aa12.64□□□□□ -0.39
ZNF540-205ENST00000587220 PLIN4Q96Q06 1357 aa12.64□□□□□ -0.39
ZNF540-205ENST00000587220 A0A1W2PPC1 479 aa12.63□□□□□ -0.39
ZNF540-205ENST00000587220 RANBP6O60518 1105 aaKnown RBP12.63□□□□□ -0.39
ZNF540-205ENST00000587220 BMP3P12645 472 aa12.63□□□□□ -0.39
ZNF540-205ENST00000587220 STAT2P52630 851 aa12.63□□□□□ -0.39
ZNF540-205ENST00000587220 LRRC26Q2I0M4 334 aa12.63□□□□□ -0.39
ZNF540-205ENST00000587220 MCMDC2Q4G0Z9 681 aa12.63□□□□□ -0.39
ZNF540-205ENST00000587220 PRAMEF19Q5SWL8 479 aa12.63□□□□□ -0.39
ZNF540-205ENST00000587220 GJC2Q5T442 439 aaPredicted RBP12.63□□□□□ -0.39
ZNF540-205ENST00000587220 VPS53Q5VIR6 699 aa12.63□□□□□ -0.39
ZNF540-205ENST00000587220 REPS2Q8NFH8 660 aa12.63□□□□□ -0.39
ZNF540-205ENST00000587220 CHMP4CQ96CF2 233 aa12.63□□□□□ -0.39
ZNF540-205ENST00000587220 FAM227BQ96M60 508 aa12.63□□□□□ -0.39
ZNF540-205ENST00000587220 TINF2Q9BSI4 451 aa12.63□□□□□ -0.39
ZNF540-205ENST00000587220 CNPY2Q9Y2B0 182 aa12.63□□□□□ -0.39
ZNF540-205ENST00000587220 DIS3Q9Y2L1 958 aaKnown RBP12.63□□□□□ -0.39
ZNF540-205ENST00000587220 IGHA2P01877 340 aa12.62□□□□□ -0.39
ZNF540-205ENST00000587220 RARBP10826 455 aa12.62□□□□□ -0.39
ZNF540-205ENST00000587220 SLC1A4P43007 532 aa12.62□□□□□ -0.39
ZNF540-205ENST00000587220 ATN1P54259 1190 aaPredicted RBP12.62□□□□□ -0.39
ZNF540-205ENST00000587220 MFAP1P55081 439 aaKnown RBP12.62□□□□□ -0.39
ZNF540-205ENST00000587220 RRP12Q5JTH9 1297 aaKnown RBP12.62□□□□□ -0.39
ZNF540-205ENST00000587220 CHD1LQ86WJ1 897 aa12.62□□□□□ -0.39
ZNF540-205ENST00000587220 TICAM2Q86XR7 235 aa12.62□□□□□ -0.39
ZNF540-205ENST00000587220 SMC5Q8IY18 1101 aa12.62□□□□□ -0.39
ZNF540-205ENST00000587220 ANKRD35Q8N283 1001 aa12.62□□□□□ -0.39
ZNF540-205ENST00000587220 CHURC1Q8WUH1 139 aa12.62□□□□□ -0.39
ZNF540-205ENST00000587220 PRO3102Q9H379 93 aa12.62□□□□□ -0.39
ZNF540-205ENST00000587220 SLC38A10Q9HBR0 1119 aa12.62□□□□□ -0.39
ZNF540-205ENST00000587220 RAVER2Q9HCJ3 691 aaKnown RBP12.62□□□□□ -0.39
ZNF540-205ENST00000587220 NRBP1Q9UHY1 535 aa12.62□□□□□ -0.39
ZNF540-205ENST00000587220 A0A0D9SFI3 127 aa12.61□□□□□ -0.39
ZNF540-205ENST00000587220 TMEM232C9JQI7 657 aa12.61□□□□□ -0.39
ZNF540-205ENST00000587220 ATP2A1O14983 1001 aa12.61□□□□□ -0.39
ZNF540-205ENST00000587220 FOXP2O15409 715 aa12.61□□□□□ -0.39
ZNF540-205ENST00000587220 FDX1P10109 184 aa12.61□□□□□ -0.39
ZNF540-205ENST00000587220 MCCP23508 829 aa12.61□□□□□ -0.39
ZNF540-205ENST00000587220 OAZ1P54368 228 aa12.61□□□□□ -0.39
ZNF540-205ENST00000587220 NMIQ13287 307 aaPredicted RBP12.61□□□□□ -0.39
ZNF540-205ENST00000587220 ZNF792Q3KQV3 632 aa12.61□□□□□ -0.39
ZNF540-205ENST00000587220 FAM160B2Q86V87 743 aa12.61□□□□□ -0.39
ZNF540-205ENST00000587220 EXOC6Q8TAG9 804 aa12.61□□□□□ -0.39
ZNF540-205ENST00000587220 GMCL1Q96IK5 515 aa12.61□□□□□ -0.39
ZNF540-205ENST00000587220 XPNPEP3Q9NQH7 507 aa12.61□□□□□ -0.39
ZNF540-205ENST00000587220 INCENPQ9NQS7 918 aa12.61□□□□□ -0.39
ZNF540-205ENST00000587220 HOMER2Q9NSB8 354 aa12.61□□□□□ -0.39
ZNF540-205ENST00000587220 PRKAG2Q9UGJ0 569 aa12.61□□□□□ -0.39
ZNF540-205ENST00000587220 FBXO40Q9UH90 709 aa12.61□□□□□ -0.39
ZNF540-205ENST00000587220 ANAPC4Q9UJX5 808 aa12.61□□□□□ -0.39
ZNF540-205ENST00000587220 MTMR7Q9Y216 660 aa12.61□□□□□ -0.39
ZNF540-205ENST00000587220 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.61□□□□□ -0.39
ZNF540-205ENST00000587220 RIPK3Q9Y572 518 aa12.61□□□□□ -0.39
ZNF540-205ENST00000587220 SZT2Q5T011 3432 aa12.6□□□□□ -0.39
ZNF540-205ENST00000587220 NMT2O60551 498 aa12.6□□□□□ -0.39
ZNF540-205ENST00000587220 MAGEA10P43363 369 aaPredicted RBP12.6□□□□□ -0.39
ZNF540-205ENST00000587220 NUCB1Q02818 461 aa12.6□□□□□ -0.39
ZNF540-205ENST00000587220 ALX1Q15699 326 aa12.6□□□□□ -0.39
ZNF540-205ENST00000587220 RNF180Q86T96 592 aa12.6□□□□□ -0.39
ZNF540-205ENST00000587220 MSL3Q8N5Y2 521 aaKnown RBP12.6□□□□□ -0.39
ZNF540-205ENST00000587220 CHST13Q8NET6 341 aa12.6□□□□□ -0.39
ZNF540-205ENST00000587220 GDF15Q99988 308 aa12.6□□□□□ -0.39
ZNF540-205ENST00000587220 LBHD1Q9BQE6 289 aaPredicted RBP12.6□□□□□ -0.39
ZNF540-205ENST00000587220 UBE2OQ9C0C9 1292 aaKnown RBP12.6□□□□□ -0.39
ZNF540-205ENST00000587220 CCDC171Q6TFL3 1326 aa12.6□□□□□ -0.39
ZNF540-205ENST00000587220 ORC4O43929 436 aa12.59□□□□□ -0.39
ZNF540-205ENST00000587220 IGHDP01880 384 aa12.59□□□□□ -0.39
ZNF540-205ENST00000587220 FGAP02671 866 aa12.59□□□□□ -0.39
ZNF540-205ENST00000587220 HSPD1P10809 573 aaKnown RBP12.59□□□□□ -0.39
ZNF540-205ENST00000587220 AKR1A1P14550 325 aa12.59□□□□□ -0.39
ZNF540-205ENST00000587220 BMP8BP34820 402 aa12.59□□□□□ -0.39
ZNF540-205ENST00000587220 ADCYAP1R1P41586 468 aa12.59□□□□□ -0.39
ZNF540-205ENST00000587220 HAND2P61296 217 aa12.59□□□□□ -0.39
ZNF540-205ENST00000587220 CCDC96Q2M329 555 aa12.59□□□□□ -0.39
ZNF540-205ENST00000587220 KCTD1Q719H9 257 aa12.59□□□□□ -0.39
ZNF540-205ENST00000587220 STAG1Q8WVM7 1258 aa12.59□□□□□ -0.39
ZNF540-205ENST00000587220 FERMT2Q96AC1 680 aa12.59□□□□□ -0.39
ZNF540-205ENST00000587220 IL17RBQ9NRM6 502 aa12.59□□□□□ -0.39
ZNF540-205ENST00000587220 DIAPH3Q9NSV4 1193 aa12.59□□□□□ -0.39
ZNF540-205ENST00000587220 ZHX1Q9UKY1 873 aaPredicted RBP12.59□□□□□ -0.39
ZNF540-205ENST00000587220 ATP11BQ9Y2G3 1177 aa12.59□□□□□ -0.39
ZNF540-205ENST00000587220 SYNGAP1Q96PV0 1343 aa12.59□□□□□ -0.39
ZNF540-205ENST00000587220 LAMA3Q16787 3333 aa12.59□□□□□ -0.39
ZNF540-205ENST00000587220 TAL1P17542 331 aaPredicted RBP12.58□□□□□ -0.4
ZNF540-205ENST00000587220 SDSP20132 328 aa12.58□□□□□ -0.4
ZNF540-205ENST00000587220 RTP1P59025 263 aa12.58□□□□□ -0.4
ZNF540-205ENST00000587220 MDM2Q00987 491 aaPredicted RBP12.58□□□□□ -0.4
ZNF540-205ENST00000587220 LRRC41Q15345 812 aa12.58□□□□□ -0.4
ZNF540-205ENST00000587220 RCSD1Q6JBY9 416 aa12.58□□□□□ -0.4
ZNF540-205ENST00000587220 MFSD6Q6ZSS7 791 aa12.58□□□□□ -0.4
ZNF540-205ENST00000587220 ZNF467Q7Z7K2 595 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms