RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 USP17L21D6R901 530 aa17.01■□□□□ 0.31
CXXC1-208ENST00000587170 ZNF467Q7Z7K2 595 aaPredicted RBP17.01■□□□□ 0.31
CXXC1-208ENST00000587170 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.01■□□□□ 0.31
CXXC1-208ENST00000587170 TEX13BQ9BXU2 312 aa17.01■□□□□ 0.31
CXXC1-208ENST00000587170 TMEM39AQ9NV64 488 aa17.01■□□□□ 0.31
CXXC1-208ENST00000587170 CNPY2Q9Y2B0 182 aa17.01■□□□□ 0.31
CXXC1-208ENST00000587170 MROH7Q68CQ1 1323 aa17■□□□□ 0.31
CXXC1-208ENST00000587170 ATP2A1O14983 1001 aa17■□□□□ 0.31
CXXC1-208ENST00000587170 IFIT2P09913 472 aaKnown RBP17■□□□□ 0.31
CXXC1-208ENST00000587170 ATP5JP18859 108 aa17■□□□□ 0.31
CXXC1-208ENST00000587170 UBE3CQ15386 1083 aa17■□□□□ 0.31
CXXC1-208ENST00000587170 SLFNL1Q499Z3 407 aa17■□□□□ 0.31
CXXC1-208ENST00000587170 FAM83BQ5T0W9 1011 aa17■□□□□ 0.31
CXXC1-208ENST00000587170 RASIP1Q5U651 963 aa17■□□□□ 0.31
CXXC1-208ENST00000587170 AMOTL1Q8IY63 956 aa17■□□□□ 0.31
CXXC1-208ENST00000587170 USP38Q8NB14 1042 aa17■□□□□ 0.31
CXXC1-208ENST00000587170 NUP133Q8WUM0 1156 aa17■□□□□ 0.31
CXXC1-208ENST00000587170 HAUS7Q99871 368 aa17■□□□□ 0.31
CXXC1-208ENST00000587170 TANC1Q9C0D5 1861 aa17■□□□□ 0.31
CXXC1-208ENST00000587170 DDX24Q9GZR7 859 aaKnown RBP eCLIP17■□□□□ 0.31
CXXC1-208ENST00000587170 ELP1O95163 1332 aa16.99■□□□□ 0.31
CXXC1-208ENST00000587170 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.99■□□□□ 0.31
CXXC1-208ENST00000587170 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.99■□□□□ 0.31
CXXC1-208ENST00000587170 DCDC2CA8MYV0 355 aa16.99■□□□□ 0.31
CXXC1-208ENST00000587170 DUSP11O75319 330 aaKnown RBP16.99■□□□□ 0.31
CXXC1-208ENST00000587170 SNAI1O95863 264 aaPredicted RBP16.99■□□□□ 0.31
CXXC1-208ENST00000587170 TIMP1P01033 207 aa16.99■□□□□ 0.31
CXXC1-208ENST00000587170 GRIN2CQ14957 1233 aa16.99■□□□□ 0.31
CXXC1-208ENST00000587170 SIRT2Q8IXJ6 389 aa16.99■□□□□ 0.31
CXXC1-208ENST00000587170 RPAP2Q8IXW5 612 aaPredicted RBP16.99■□□□□ 0.31
CXXC1-208ENST00000587170 PANK1Q8TE04 598 aa16.99■□□□□ 0.31
CXXC1-208ENST00000587170 SLF1Q9BQI6 1058 aa16.99■□□□□ 0.31
CXXC1-208ENST00000587170 UPF3AQ9H1J1 476 aaKnown RBP16.99■□□□□ 0.31
CXXC1-208ENST00000587170 STARD7Q9NQZ5 370 aa16.99■□□□□ 0.31
CXXC1-208ENST00000587170 CDK7P50613 346 aa16.98■□□□□ 0.31
CXXC1-208ENST00000587170 TJAP1Q5JTD0 557 aa16.98■□□□□ 0.31
CXXC1-208ENST00000587170 CTR9Q6PD62 1173 aa16.98■□□□□ 0.31
CXXC1-208ENST00000587170 SAMD1Q6SPF0 538 aaPredicted RBP16.98■□□□□ 0.31
CXXC1-208ENST00000587170 ARPP21Q9UBL0 812 aaPredicted RBP16.98■□□□□ 0.31
CXXC1-208ENST00000587170 FAM184BQ9ULE4 1060 aa16.98■□□□□ 0.31
CXXC1-208ENST00000587170 MYADML2A6NDP7 307 aa16.97■□□□□ 0.31
CXXC1-208ENST00000587170 ADCY6O43306 1168 aa16.97■□□□□ 0.31
CXXC1-208ENST00000587170 RAB11FIP3O75154 756 aa16.97■□□□□ 0.31
CXXC1-208ENST00000587170 HMMRO75330 724 aa16.97■□□□□ 0.31
CXXC1-208ENST00000587170 CHGBP05060 677 aa16.97■□□□□ 0.31
CXXC1-208ENST00000587170 NKX3-2P78367 333 aa16.97■□□□□ 0.31
CXXC1-208ENST00000587170 KCNA10Q16322 511 aa16.97■□□□□ 0.31
CXXC1-208ENST00000587170 SNRNP48Q6IEG0 339 aaKnown RBP16.97■□□□□ 0.31
CXXC1-208ENST00000587170 MFSD5Q6N075 450 aa16.97■□□□□ 0.31
CXXC1-208ENST00000587170 DDRGK1Q96HY6 314 aa16.97■□□□□ 0.31
CXXC1-208ENST00000587170 FGD4Q96M96 766 aa16.97■□□□□ 0.31
CXXC1-208ENST00000587170 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.97■□□□□ 0.31
CXXC1-208ENST00000587170 ZNF576Q9H609 170 aa16.97■□□□□ 0.31
CXXC1-208ENST00000587170 NYAP2Q9P242 653 aa16.97■□□□□ 0.31
CXXC1-208ENST00000587170 RIPK3Q9Y572 518 aa16.97■□□□□ 0.31
CXXC1-208ENST00000587170 SCN5AQ14524 2016 aa16.96■□□□□ 0.31
CXXC1-208ENST00000587170 RASA1P20936 1047 aa16.96■□□□□ 0.31
CXXC1-208ENST00000587170 PPIGQ13427 754 aaKnown RBP eCLIP16.96■□□□□ 0.313e-6■■□□□ 12.9
CXXC1-208ENST00000587170 SBK1Q52WX2 424 aa16.96■□□□□ 0.31
CXXC1-208ENST00000587170 C16orf59Q7L2K0 433 aa16.96■□□□□ 0.31
CXXC1-208ENST00000587170 TIFAQ96CG3 184 aa16.96■□□□□ 0.31
CXXC1-208ENST00000587170 BOLA2Q9H3K6 86 aa16.96■□□□□ 0.31
CXXC1-208ENST00000587170 ZBTB40Q9NUA8 1239 aa16.96■□□□□ 0.31
CXXC1-208ENST00000587170 SLC4A4Q9Y6R1 1079 aa16.96■□□□□ 0.31
CXXC1-208ENST00000587170 PLIN4Q96Q06 1357 aa16.95■□□□□ 0.3
CXXC1-208ENST00000587170 IGKV6D-41A0A0C4DH26 115 aa16.95■□□□□ 0.3
CXXC1-208ENST00000587170 NDUFB10O96000 172 aa16.95■□□□□ 0.3
CXXC1-208ENST00000587170 GJA9P57773 515 aa16.95■□□□□ 0.3
CXXC1-208ENST00000587170 TMEM240Q5SV17 173 aa16.95■□□□□ 0.3
CXXC1-208ENST00000587170 PRPF38AQ8NAV1 312 aaKnown RBP16.95■□□□□ 0.3
CXXC1-208ENST00000587170 PCSK9Q8NBP7 692 aaKnown RBP16.95■□□□□ 0.3
CXXC1-208ENST00000587170 GLT1D1Q96MS3 346 aa16.95■□□□□ 0.3
CXXC1-208ENST00000587170 NUP88Q99567 741 aaPredicted RBP16.95■□□□□ 0.3
CXXC1-208ENST00000587170 KATNBL1Q9H079 304 aa16.95■□□□□ 0.3
CXXC1-208ENST00000587170 PUS7LQ9H0K6 701 aaKnown RBP16.95■□□□□ 0.3
CXXC1-208ENST00000587170 SYNPO2Q9UMS6 1093 aa16.95■□□□□ 0.3
CXXC1-208ENST00000587170 TCF20Q9UGU0 1960 aaKnown RBP16.95■□□□□ 0.3
CXXC1-208ENST00000587170 PTPRSQ13332 1948 aa16.94■□□□□ 0.3
CXXC1-208ENST00000587170 APBB1O00213 710 aa16.94■□□□□ 0.3
CXXC1-208ENST00000587170 CTAGE5O15320 804 aa16.94■□□□□ 0.3
CXXC1-208ENST00000587170 ASGR1P07306 291 aa16.94■□□□□ 0.3
CXXC1-208ENST00000587170 ACVR2BQ13705 512 aa16.94■□□□□ 0.3
CXXC1-208ENST00000587170 AKNAD1Q5T1N1 836 aa16.94■□□□□ 0.3
CXXC1-208ENST00000587170 ZSCAN25Q6NSZ9 544 aa16.94■□□□□ 0.3
CXXC1-208ENST00000587170 GIMAP6Q6P9H5 292 aa16.94■□□□□ 0.3
CXXC1-208ENST00000587170 CCDC174Q6PII3 467 aa16.94■□□□□ 0.3
CXXC1-208ENST00000587170 FAM126BQ8IXS8 530 aa16.94■□□□□ 0.3
CXXC1-208ENST00000587170 DDX11Q96FC9 970 aa16.94■□□□□ 0.3
CXXC1-208ENST00000587170 PBX4Q9BYU1 374 aa16.94■□□□□ 0.3
CXXC1-208ENST00000587170 ABHD16BQ9H3Z7 469 aa16.94■□□□□ 0.3
CXXC1-208ENST00000587170 SLC38A10Q9HBR0 1119 aa16.94■□□□□ 0.3
CXXC1-208ENST00000587170 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.94■□□□□ 0.3
CXXC1-208ENST00000587170 ZHX1Q9UKY1 873 aaPredicted RBP16.94■□□□□ 0.3
CXXC1-208ENST00000587170 SCN10AQ9Y5Y9 1956 aa16.94■□□□□ 0.3
CXXC1-208ENST00000587170 A0A0U1RQG5 324 aaPredicted RBP16.93■□□□□ 0.3
CXXC1-208ENST00000587170 F5H6K3 240 aa16.93■□□□□ 0.3
CXXC1-208ENST00000587170 ARVCFO00192 962 aa16.93■□□□□ 0.3
CXXC1-208ENST00000587170 C6orf222P0C671 652 aaPredicted RBP16.93■□□□□ 0.3
CXXC1-208ENST00000587170 MS4A1P11836 297 aa16.93■□□□□ 0.3
CXXC1-208ENST00000587170 OAZ1P54368 228 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms