RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 GREB1LQ9C091 1923 aaPredicted RBP19.6■□□□□ 0.73
NPC1-205ENST00000587163 SYNRGQ9UMZ2 1314 aa19.59■□□□□ 0.73
NPC1-205ENST00000587163 SMARCA5O60264 1052 aaPredicted RBP19.59■□□□□ 0.73
NPC1-205ENST00000587163 RASA1P20936 1047 aa19.59■□□□□ 0.73
NPC1-205ENST00000587163 COPB2P35606 906 aa19.59■□□□□ 0.73
NPC1-205ENST00000587163 IRX5P78411 483 aaPredicted RBP19.59■□□□□ 0.73
NPC1-205ENST00000587163 SNRNP48Q6IEG0 339 aaKnown RBP19.59■□□□□ 0.73
NPC1-205ENST00000587163 ANKRD33Q7Z3H0 272 aa19.59■□□□□ 0.73
NPC1-205ENST00000587163 KLHDC9Q8NEP7 349 aa19.59■□□□□ 0.73
NPC1-205ENST00000587163 SLF1Q9BQI6 1058 aa19.59■□□□□ 0.73
NPC1-205ENST00000587163 TSEN34Q9BSV6 310 aaKnown RBP19.59■□□□□ 0.73
NPC1-205ENST00000587163 SPTBN5Q9NRC6 3674 aaKnown RBP19.58■□□□□ 0.73
NPC1-205ENST00000587163 DNAJC25-GNG10A0A024R161 153 aa19.58■□□□□ 0.72
NPC1-205ENST00000587163 MYADML2A6NDP7 307 aa19.58■□□□□ 0.72
NPC1-205ENST00000587163 GSG1L2A8MUP6 293 aa19.58■□□□□ 0.72
NPC1-205ENST00000587163 F5H6K3 240 aa19.58■□□□□ 0.72
NPC1-205ENST00000587163 NDUFB10O96000 172 aa19.58■□□□□ 0.72
NPC1-205ENST00000587163 FPGSQ05932 587 aa19.58■□□□□ 0.72
NPC1-205ENST00000587163 KLRC3Q07444 240 aa19.58■□□□□ 0.72
NPC1-205ENST00000587163 KCNA10Q16322 511 aa19.58■□□□□ 0.72
NPC1-205ENST00000587163 SBK1Q52WX2 424 aa19.58■□□□□ 0.72
NPC1-205ENST00000587163 CCSAPQ6IQ19 270 aaPredicted RBP19.58■□□□□ 0.72
NPC1-205ENST00000587163 ZSCAN25Q6NSZ9 544 aa19.58■□□□□ 0.72
NPC1-205ENST00000587163 TOX2Q96NM4 488 aa19.58■□□□□ 0.72
NPC1-205ENST00000587163 TEX13BQ9BXU2 312 aa19.58■□□□□ 0.72
NPC1-205ENST00000587163 NYAP2Q9P242 653 aa19.58■□□□□ 0.72
NPC1-205ENST00000587163 ARPP21Q9UBL0 812 aaPredicted RBP19.58■□□□□ 0.72
NPC1-205ENST00000587163 FOSL2P15408 326 aa19.57■□□□□ 0.72
NPC1-205ENST00000587163 SLC4A3P48751 1232 aa19.57■□□□□ 0.72
NPC1-205ENST00000587163 MAMDC4Q6UXC1 1216 aa19.57■□□□□ 0.72
NPC1-205ENST00000587163 MSL3Q8N5Y2 521 aaKnown RBP19.57■□□□□ 0.72
NPC1-205ENST00000587163 PRPF38AQ8NAV1 312 aaKnown RBP19.57■□□□□ 0.72
NPC1-205ENST00000587163 DDX11Q96FC9 970 aa19.57■□□□□ 0.72
NPC1-205ENST00000587163 STARD7Q9NQZ5 370 aa19.57■□□□□ 0.72
NPC1-205ENST00000587163 FAM184BQ9ULE4 1060 aa19.57■□□□□ 0.72
NPC1-205ENST00000587163 SYNGAP1Q96PV0 1343 aa19.56■□□□□ 0.72
NPC1-205ENST00000587163 DCDC2CA8MYV0 355 aa19.56■□□□□ 0.72
NPC1-205ENST00000587163 MINDY4BA8MYZ0 360 aa19.56■□□□□ 0.72
NPC1-205ENST00000587163 ADCY6O43306 1168 aa19.56■□□□□ 0.72
NPC1-205ENST00000587163 CPXCR1Q8N123 301 aa19.56■□□□□ 0.72
NPC1-205ENST00000587163 NUP133Q8WUM0 1156 aa19.56■□□□□ 0.72
NPC1-205ENST00000587163 MKNK2Q9HBH9 465 aa19.56■□□□□ 0.72
NPC1-205ENST00000587163 CLIP2Q9UDT6 1046 aa19.56■□□□□ 0.72
NPC1-205ENST00000587163 ZHX1Q9UKY1 873 aaPredicted RBP19.56■□□□□ 0.72
NPC1-205ENST00000587163 IGKV6D-41A0A0C4DH26 115 aa19.55■□□□□ 0.72
NPC1-205ENST00000587163 MOXD2PA6NHM9 499 aa19.55■□□□□ 0.72
NPC1-205ENST00000587163 ATP2A1O14983 1001 aa19.55■□□□□ 0.72
NPC1-205ENST00000587163 GRIN2CQ14957 1233 aa19.55■□□□□ 0.72
NPC1-205ENST00000587163 OSBP2Q969R2 916 aa19.55■□□□□ 0.72
NPC1-205ENST00000587163 FGD4Q96M96 766 aa19.55■□□□□ 0.72
NPC1-205ENST00000587163 LRRCC1Q9C099 1032 aa19.55■□□□□ 0.72
NPC1-205ENST00000587163 RAVER2Q9HCJ3 691 aaKnown RBP19.55■□□□□ 0.72
NPC1-205ENST00000587163 TBX21Q9UL17 535 aa19.55■□□□□ 0.72
NPC1-205ENST00000587163 TMEM265A0A087WTH1 108 aa19.54■□□□□ 0.72
NPC1-205ENST00000587163 DUSP11O75319 330 aaKnown RBP19.54■□□□□ 0.72
NPC1-205ENST00000587163 TIMP1P01033 207 aa19.54■□□□□ 0.72
NPC1-205ENST00000587163 ACVR2BQ13705 512 aa19.54■□□□□ 0.72
NPC1-205ENST00000587163 C16orf59Q7L2K0 433 aa19.54■□□□□ 0.72
NPC1-205ENST00000587163 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.53■□□□□ 0.72
NPC1-205ENST00000587163 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.53■□□□□ 0.72
NPC1-205ENST00000587163 ZBED4O75132 1171 aa19.53■□□□□ 0.72
NPC1-205ENST00000587163 PRDM1O75626 825 aa19.53■□□□□ 0.72
NPC1-205ENST00000587163 DNAJB2P25686 324 aa19.53■□□□□ 0.72
NPC1-205ENST00000587163 CDK7P50613 346 aa19.53■□□□□ 0.72
NPC1-205ENST00000587163 GIMAP6Q6P9H5 292 aa19.53■□□□□ 0.72
NPC1-205ENST00000587163 ZNF467Q7Z7K2 595 aaPredicted RBP19.53■□□□□ 0.72
NPC1-205ENST00000587163 KIFC2Q96AC6 838 aa19.53■□□□□ 0.72
NPC1-205ENST00000587163 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.53■□□□□ 0.722e-9■■■□□ 14.6
NPC1-205ENST00000587163 SLC38A10Q9HBR0 1119 aa19.53■□□□□ 0.72
NPC1-205ENST00000587163 EPB41L4AQ9HCS5 686 aaPredicted RBP19.53■□□□□ 0.72
NPC1-205ENST00000587163 ECHDC1Q9NTX5 307 aa19.53■□□□□ 0.72
NPC1-205ENST00000587163 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.53■□□□□ 0.72
NPC1-205ENST00000587163 ASGR1P07306 291 aa19.52■□□□□ 0.72
NPC1-205ENST00000587163 C6orf222P0C671 652 aaPredicted RBP19.52■□□□□ 0.72
NPC1-205ENST00000587163 CST5P28325 142 aaPredicted RBP19.52■□□□□ 0.72
NPC1-205ENST00000587163 CCDC144BQ3MJ40 725 aa19.52■□□□□ 0.72
NPC1-205ENST00000587163 TSHZ3Q63HK5 1081 aa19.52■□□□□ 0.72
NPC1-205ENST00000587163 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.52■□□□□ 0.72
NPC1-205ENST00000587163 POTEDQ86YR6 584 aa19.52■□□□□ 0.72
NPC1-205ENST00000587163 KBTBD3Q8NAB2 608 aa19.52■□□□□ 0.72
NPC1-205ENST00000587163 MKL1Q969V6 931 aa19.52■□□□□ 0.72
NPC1-205ENST00000587163 GLT1D1Q96MS3 346 aa19.52■□□□□ 0.72
NPC1-205ENST00000587163 MCM3APO60318 1980 aa19.52■□□□□ 0.71
NPC1-205ENST00000587163 ELP1O95163 1332 aa19.51■□□□□ 0.71
NPC1-205ENST00000587163 MYH4Q9Y623 1939 aa19.51■□□□□ 0.71
NPC1-205ENST00000587163 C20orf194Q5TEA3 1177 aa19.51■□□□□ 0.71
NPC1-205ENST00000587163 MFSD5Q6N075 450 aa19.51■□□□□ 0.71
NPC1-205ENST00000587163 ANKRD35Q8N283 1001 aa19.51■□□□□ 0.71
NPC1-205ENST00000587163 USP38Q8NB14 1042 aa19.51■□□□□ 0.71
NPC1-205ENST00000587163 APPBP2Q92624 585 aa19.51■□□□□ 0.71
NPC1-205ENST00000587163 CEP95Q96GE4 821 aa19.51■□□□□ 0.71
NPC1-205ENST00000587163 UPF3AQ9H1J1 476 aaKnown RBP19.51■□□□□ 0.71
NPC1-205ENST00000587163 ABHD16BQ9H3Z7 469 aa19.51■□□□□ 0.71
NPC1-205ENST00000587163 MTMR4Q9NYA4 1195 aa19.51■□□□□ 0.71
NPC1-205ENST00000587163 CTAGE5O15320 804 aa19.5■□□□□ 0.71
NPC1-205ENST00000587163 RNF113AO15541 343 aaKnown RBP19.5■□□□□ 0.71
NPC1-205ENST00000587163 GJA9P57773 515 aa19.5■□□□□ 0.71
NPC1-205ENST00000587163 CNTN2Q02246 1040 aa19.5■□□□□ 0.71
NPC1-205ENST00000587163 GNASQ5JWF2 1037 aa19.5■□□□□ 0.71
NPC1-205ENST00000587163 TMEM240Q5SV17 173 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms