RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 MB21D2Q8IYB1 491 aaPredicted RBP18.87■□□□□ 0.61
ATG4D-205ENST00000586477 TMTC2Q8N394 836 aa18.87■□□□□ 0.61
ATG4D-205ENST00000586477 U2AF1L4Q8WU68 220 aaKnown RBP18.87■□□□□ 0.61
ATG4D-205ENST00000586477 TTC14Q96N46 770 aa18.87■□□□□ 0.61
ATG4D-205ENST00000586477 MOV10L1Q9BXT6 1211 aaKnown RBP18.87■□□□□ 0.61
ATG4D-205ENST00000586477 ZSWIM6Q9HCJ5 1215 aa18.87■□□□□ 0.61
ATG4D-205ENST00000586477 HOXC10Q9NYD6 342 aa18.87■□□□□ 0.61
ATG4D-205ENST00000586477 ZSWIM5Q9P217 1185 aa18.87■□□□□ 0.61
ATG4D-205ENST00000586477 ZNFX1Q9P2E3 1918 aaKnown RBP18.87■□□□□ 0.61
ATG4D-205ENST00000586477 ZNF236Q9UL36 1845 aa18.87■□□□□ 0.61
ATG4D-205ENST00000586477 SYNPO2Q9UMS6 1093 aa18.87■□□□□ 0.61
ATG4D-205ENST00000586477 ADAMTS5Q9UNA0 930 aa18.87■□□□□ 0.61
ATG4D-205ENST00000586477 FLOT1O75955 427 aa18.86■□□□□ 0.61
ATG4D-205ENST00000586477 XRCC5P13010 732 aaKnown RBP18.86■□□□□ 0.61
ATG4D-205ENST00000586477 PTPREP23469 700 aa18.86■□□□□ 0.61
ATG4D-205ENST00000586477 FAM47AQ5JRC9 791 aa18.86■□□□□ 0.61
ATG4D-205ENST00000586477 FAM83BQ5T0W9 1011 aa18.86■□□□□ 0.61
ATG4D-205ENST00000586477 NKX2-3Q8TAU0 364 aa18.86■□□□□ 0.61
ATG4D-205ENST00000586477 SOCS4Q8WXH5 440 aa18.86■□□□□ 0.61
ATG4D-205ENST00000586477 CEP95Q96GE4 821 aa18.86■□□□□ 0.61
ATG4D-205ENST00000586477 NUP88Q99567 741 aaPredicted RBP18.86■□□□□ 0.61
ATG4D-205ENST00000586477 SGPL1O95470 568 aa18.85■□□□□ 0.61
ATG4D-205ENST00000586477 RPS6KB1P23443 525 aa18.85■□□□□ 0.61
ATG4D-205ENST00000586477 CCNA1P78396 465 aa18.85■□□□□ 0.61
ATG4D-205ENST00000586477 GRB14Q14449 540 aa18.85■□□□□ 0.61
ATG4D-205ENST00000586477 ANKRD1Q15327 319 aa18.85■□□□□ 0.61
ATG4D-205ENST00000586477 ADCK5Q3MIX3 580 aa18.85■□□□□ 0.61
ATG4D-205ENST00000586477 DGKHQ86XP1 1220 aa18.85■□□□□ 0.61
ATG4D-205ENST00000586477 REPS2Q8NFH8 660 aa18.85■□□□□ 0.61
ATG4D-205ENST00000586477 MKL1Q969V6 931 aa18.85■□□□□ 0.61
ATG4D-205ENST00000586477 ZSCAN10Q96SZ4 725 aaPredicted RBP18.85■□□□□ 0.61
ATG4D-205ENST00000586477 SPATC1LQ9H0A9 340 aa18.85■□□□□ 0.61
ATG4D-205ENST00000586477 CRISPLD2Q9H0B8 497 aa18.85■□□□□ 0.61
ATG4D-205ENST00000586477 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.85■□□□□ 0.61
ATG4D-205ENST00000586477 MTMR4Q9NYA4 1195 aa18.85■□□□□ 0.61
ATG4D-205ENST00000586477 FLRT1Q9NZU1 646 aa18.85■□□□□ 0.61
ATG4D-205ENST00000586477 CLIP2Q9UDT6 1046 aa18.85■□□□□ 0.61
ATG4D-205ENST00000586477 TAF6LQ9Y6J9 622 aa18.85■□□□□ 0.61
ATG4D-205ENST00000586477 PRC1O43663 620 aa18.84■□□□□ 0.61
ATG4D-205ENST00000586477 ST18O60284 1047 aa18.84■□□□□ 0.61
ATG4D-205ENST00000586477 TTLL1O95922 423 aa18.84■□□□□ 0.61
ATG4D-205ENST00000586477 NDUFB10O96000 172 aa18.84■□□□□ 0.61
ATG4D-205ENST00000586477 IGHA2P01877 340 aa18.84■□□□□ 0.61
ATG4D-205ENST00000586477 RGS2P41220 211 aa18.84■□□□□ 0.61
ATG4D-205ENST00000586477 MAP2K5Q13163 448 aa18.84■□□□□ 0.61
ATG4D-205ENST00000586477 TMEM132BQ14DG7 1078 aa18.84■□□□□ 0.61
ATG4D-205ENST00000586477 DEFB118Q96PH6 123 aa18.84■□□□□ 0.61
ATG4D-205ENST00000586477 GOPCQ9HD26 462 aa18.84■□□□□ 0.61
ATG4D-205ENST00000586477 ALPK3Q96L96 1907 aa18.84■□□□□ 0.61
ATG4D-205ENST00000586477 TNKSO95271 1327 aa18.83■□□□□ 0.61
ATG4D-205ENST00000586477 SLC15A5A6NIM6 579 aa18.83■□□□□ 0.6
ATG4D-205ENST00000586477 F5H6K3 240 aa18.83■□□□□ 0.6
ATG4D-205ENST00000586477 IFIT3O14879 490 aaKnown RBP18.83■□□□□ 0.6
ATG4D-205ENST00000586477 KLRC3Q07444 240 aa18.83■□□□□ 0.6
ATG4D-205ENST00000586477 FBXL16Q8N461 479 aa18.83■□□□□ 0.6
ATG4D-205ENST00000586477 MB21D1Q8N884 522 aa18.83■□□□□ 0.6
ATG4D-205ENST00000586477 NPLOC4Q8TAT6 608 aa18.83■□□□□ 0.6
ATG4D-205ENST00000586477 APBA2Q99767 749 aa18.83■□□□□ 0.6
ATG4D-205ENST00000586477 PPP1R9AQ9ULJ8 1098 aa18.83■□□□□ 0.6
ATG4D-205ENST00000586477 STX8Q9UNK0 236 aa18.83■□□□□ 0.6
ATG4D-205ENST00000586477 FRMPD3Q5JV73 1810 aa18.83■□□□□ 0.6
ATG4D-205ENST00000586477 HOXC6P09630 235 aa18.82■□□□□ 0.6
ATG4D-205ENST00000586477 ERCC3P19447 782 aa18.82■□□□□ 0.6
ATG4D-205ENST00000586477 LIFRP42702 1097 aa18.82■□□□□ 0.6
ATG4D-205ENST00000586477 EXOSC10Q01780 885 aaKnown RBP18.82■□□□□ 0.6
ATG4D-205ENST00000586477 CACNB2Q08289 660 aaPredicted RBP18.82■□□□□ 0.6
ATG4D-205ENST00000586477 WTAPQ15007 396 aa18.82■□□□□ 0.6
ATG4D-205ENST00000586477 TMEM67Q5HYA8 995 aa18.82■□□□□ 0.6
ATG4D-205ENST00000586477 IFIT1BQ5T764 474 aaKnown RBP18.82■□□□□ 0.6
ATG4D-205ENST00000586477 WDR78Q5VTH9 848 aa18.82■□□□□ 0.6
ATG4D-205ENST00000586477 SAMD1Q6SPF0 538 aaPredicted RBP18.82■□□□□ 0.6
ATG4D-205ENST00000586477 CCAR1Q8IX12 1150 aaKnown RBP18.82■□□□□ 0.6
ATG4D-205ENST00000586477 LRRC47Q8N1G4 583 aaKnown RBP18.82■□□□□ 0.6
ATG4D-205ENST00000586477 SHCBP1Q8NEM2 672 aa18.82■□□□□ 0.6
ATG4D-205ENST00000586477 ALDH8A1Q9H2A2 487 aaPredicted RBP18.82■□□□□ 0.6
ATG4D-205ENST00000586477 IL17RBQ9NRM6 502 aa18.82■□□□□ 0.6
ATG4D-205ENST00000586477 PDRG1Q9NUG6 133 aa18.82■□□□□ 0.6
ATG4D-205ENST00000586477 RPTORQ8N122 1335 aa18.81■□□□□ 0.6
ATG4D-205ENST00000586477 VWA5AO00534 786 aa18.81■□□□□ 0.6
ATG4D-205ENST00000586477 RAD21O60216 631 aa18.81■□□□□ 0.6
ATG4D-205ENST00000586477 NMT2O60551 498 aa18.81■□□□□ 0.6
ATG4D-205ENST00000586477 TOP1P11387 765 aaKnown RBP18.81■□□□□ 0.6
ATG4D-205ENST00000586477 PRKAR2AP13861 404 aaKnown RBP18.81■□□□□ 0.6
ATG4D-205ENST00000586477 MNX1P50219 401 aaPredicted RBP18.81■□□□□ 0.6
ATG4D-205ENST00000586477 NEK4P51957 841 aa18.81■□□□□ 0.6
ATG4D-205ENST00000586477 SYNE3Q6ZMZ3 975 aa18.81■□□□□ 0.6
ATG4D-205ENST00000586477 CYB5R4Q7L1T6 521 aa18.81■□□□□ 0.6
ATG4D-205ENST00000586477 ANKS1AQ92625 1134 aa18.81■□□□□ 0.6
ATG4D-205ENST00000586477 UPF3BQ9BZI7 483 aaKnown RBP18.81■□□□□ 0.6
ATG4D-205ENST00000586477 ZNF214Q9UL59 606 aaPredicted RBP18.81■□□□□ 0.6
ATG4D-205ENST00000586477 COBLO75128 1261 aa18.8■□□□□ 0.6
ATG4D-205ENST00000586477 CCND3P30281 292 aaPredicted RBP18.8■□□□□ 0.6
ATG4D-205ENST00000586477 NOVP48745 357 aa18.8■□□□□ 0.6
ATG4D-205ENST00000586477 MCM2P49736 904 aa18.8■□□□□ 0.6
ATG4D-205ENST00000586477 ENAHQ8N8S7 591 aaPredicted RBP18.8■□□□□ 0.6
ATG4D-205ENST00000586477 KAT14Q9H8E8 782 aa18.8■□□□□ 0.6
ATG4D-205ENST00000586477 HMX1Q9NP08 348 aaPredicted RBP18.8■□□□□ 0.6
ATG4D-205ENST00000586477 PLXNA1Q9UIW2 1896 aa18.8■□□□□ 0.6
ATG4D-205ENST00000586477 DNAH12Q6ZR08 3092 aa18.79■□□□□ 0.6
ATG4D-205ENST00000586477 CCDC69A6NI79 296 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms