RNA–Protein interactions for RNA: ENST00000586365.5

CXXC1-204, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-204ENST00000586365 MBD4O95243 580 aa23.78■■□□□ 1.4
CXXC1-204ENST00000586365 PPIGQ13427 754 aaKnown RBP eCLIP23.78■■□□□ 1.47e-7■■■■□ 24.1
CXXC1-204ENST00000586365 FAM83BQ5T0W9 1011 aa23.78■■□□□ 1.4
CXXC1-204ENST00000586365 DIEXFQ68CQ4 756 aaKnown RBP23.78■■□□□ 1.4
CXXC1-204ENST00000586365 CCSAPQ6IQ19 270 aaPredicted RBP23.78■■□□□ 1.4
CXXC1-204ENST00000586365 DDX11Q96FC9 970 aa23.78■■□□□ 1.4
CXXC1-204ENST00000586365 DDRGK1Q96HY6 314 aa23.78■■□□□ 1.4
CXXC1-204ENST00000586365 GLT1D1Q96MS3 346 aa23.78■■□□□ 1.4
CXXC1-204ENST00000586365 GAS2L1Q99501 681 aaPredicted RBP23.78■■□□□ 1.4
CXXC1-204ENST00000586365 ELP1O95163 1332 aa23.78■■□□□ 1.4
CXXC1-204ENST00000586365 CYP2D7A0A087X1C5 515 aa23.77■■□□□ 1.4
CXXC1-204ENST00000586365 RAD21O60216 631 aa23.77■■□□□ 1.4
CXXC1-204ENST00000586365 SNAI1O95863 264 aaPredicted RBP23.77■■□□□ 1.4
CXXC1-204ENST00000586365 IFIT2P09913 472 aaKnown RBP23.77■■□□□ 1.4
CXXC1-204ENST00000586365 ADD2P35612 726 aa23.77■■□□□ 1.4
CXXC1-204ENST00000586365 MAMDC4Q6UXC1 1216 aa23.77■■□□□ 1.4
CXXC1-204ENST00000586365 TEX13BQ9BXU2 312 aa23.77■■□□□ 1.4
CXXC1-204ENST00000586365 SMIM22K7EJ46 135 aa23.76■■□□□ 1.39
CXXC1-204ENST00000586365 COL9A1P20849 921 aa23.76■■□□□ 1.39
CXXC1-204ENST00000586365 CDK7P50613 346 aa23.76■■□□□ 1.39
CXXC1-204ENST00000586365 TMEM240Q5SV17 173 aa23.76■■□□□ 1.39
CXXC1-204ENST00000586365 CCDC129Q6ZRS4 1044 aa23.76■■□□□ 1.39
CXXC1-204ENST00000586365 PCSK9Q8NBP7 692 aaKnown RBP23.76■■□□□ 1.39
CXXC1-204ENST00000586365 ATXN2LQ8WWM7 1075 aaKnown RBP23.76■■□□□ 1.39
CXXC1-204ENST00000586365 KIF1BPQ96EK5 621 aa23.76■■□□□ 1.39
CXXC1-204ENST00000586365 ZHX1Q9UKY1 873 aaPredicted RBP23.76■■□□□ 1.39
CXXC1-204ENST00000586365 CST5P28325 142 aaPredicted RBP23.75■■□□□ 1.39
CXXC1-204ENST00000586365 AKNAD1Q5T1N1 836 aa23.75■■□□□ 1.39
CXXC1-204ENST00000586365 C16orf59Q7L2K0 433 aa23.75■■□□□ 1.39
CXXC1-204ENST00000586365 TMEM199Q8N511 208 aa23.75■■□□□ 1.39
CXXC1-204ENST00000586365 SLF1Q9BQI6 1058 aa23.75■■□□□ 1.39
CXXC1-204ENST00000586365 PBX4Q9BYU1 374 aa23.75■■□□□ 1.39
CXXC1-204ENST00000586365 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.75■■□□□ 1.392e-6■■■□□ 19
CXXC1-204ENST00000586365 SPC25Q9HBM1 224 aa23.75■■□□□ 1.39
CXXC1-204ENST00000586365 PAG1Q9NWQ8 432 aa23.75■■□□□ 1.39
CXXC1-204ENST00000586365 DNAJC25-GNG10A0A024R161 153 aa23.74■■□□□ 1.39
CXXC1-204ENST00000586365 SLFNL1Q499Z3 407 aa23.74■■□□□ 1.39
CXXC1-204ENST00000586365 RASIP1Q5U651 963 aa23.74■■□□□ 1.39
CXXC1-204ENST00000586365 SNRNP48Q6IEG0 339 aaKnown RBP23.74■■□□□ 1.39
CXXC1-204ENST00000586365 ZNF467Q7Z7K2 595 aaPredicted RBP23.74■■□□□ 1.39
CXXC1-204ENST00000586365 PPM1EQ8WY54 764 aa23.74■■□□□ 1.39
CXXC1-204ENST00000586365 VTI1AQ96AJ9 217 aa23.74■■□□□ 1.39
CXXC1-204ENST00000586365 MYADML2A6NDP7 307 aa23.73■■□□□ 1.39
CXXC1-204ENST00000586365 APBB1O00213 710 aa23.73■■□□□ 1.39
CXXC1-204ENST00000586365 ASGR1P07306 291 aa23.73■■□□□ 1.39
CXXC1-204ENST00000586365 C6orf222P0C671 652 aaPredicted RBP23.73■■□□□ 1.39
CXXC1-204ENST00000586365 PBX2P40425 430 aa23.73■■□□□ 1.39
CXXC1-204ENST00000586365 ACVR2BQ13705 512 aa23.73■■□□□ 1.39
CXXC1-204ENST00000586365 A0A0U1RQG5 324 aaPredicted RBP23.72■■□□□ 1.39
CXXC1-204ENST00000586365 GRXCR1A8MXD5 290 aa23.72■■□□□ 1.39
CXXC1-204ENST00000586365 ARVCFO00192 962 aa23.72■■□□□ 1.39
CXXC1-204ENST00000586365 CSF2RAP15509 400 aa23.72■■□□□ 1.39
CXXC1-204ENST00000586365 CTR9Q6PD62 1173 aa23.72■■□□□ 1.39
CXXC1-204ENST00000586365 PSRC1Q6PGN9 363 aaPredicted RBP23.72■■□□□ 1.39
CXXC1-204ENST00000586365 PRPF38AQ8NAV1 312 aaKnown RBP23.72■■□□□ 1.39
CXXC1-204ENST00000586365 ABHD16BQ9H3Z7 469 aa23.72■■□□□ 1.39
CXXC1-204ENST00000586365 PRDM12Q9H4Q4 367 aa23.72■■□□□ 1.39
CXXC1-204ENST00000586365 RIPK3Q9Y572 518 aa23.72■■□□□ 1.39
CXXC1-204ENST00000586365 SLC4A4Q9Y6R1 1079 aa23.72■■□□□ 1.39
CXXC1-204ENST00000586365 CHD9Q3L8U1 2897 aa23.71■■□□□ 1.39
CXXC1-204ENST00000586365 TLR3O15455 904 aaKnown RBP23.71■■□□□ 1.39
CXXC1-204ENST00000586365 GJA9P57773 515 aa23.71■■□□□ 1.39
CXXC1-204ENST00000586365 UBE3CQ15386 1083 aa23.71■■□□□ 1.39
CXXC1-204ENST00000586365 GNASQ5JWF2 1037 aa23.71■■□□□ 1.39
CXXC1-204ENST00000586365 ZNF365Q70YC5 407 aa23.71■■□□□ 1.39
CXXC1-204ENST00000586365 ASB2Q96Q27 587 aa23.71■■□□□ 1.39
CXXC1-204ENST00000586365 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.71■■□□□ 1.39
CXXC1-204ENST00000586365 UPF3AQ9H1J1 476 aaKnown RBP23.71■■□□□ 1.39
CXXC1-204ENST00000586365 BOLA2Q9H3K6 86 aa23.71■■□□□ 1.39
CXXC1-204ENST00000586365 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.71■■□□□ 1.39
CXXC1-204ENST00000586365 THEGQ9P2T0 379 aa23.71■■□□□ 1.39
CXXC1-204ENST00000586365 MCM3APO60318 1980 aa23.71■■□□□ 1.39
CXXC1-204ENST00000586365 ZBED9Q6R2W3 1325 aa23.7■■□□□ 1.38
CXXC1-204ENST00000586365 ATP2A1O14983 1001 aa23.7■■□□□ 1.38
CXXC1-204ENST00000586365 ZBED4O75132 1171 aa23.7■■□□□ 1.38
CXXC1-204ENST00000586365 SLC4A3P48751 1232 aa23.7■■□□□ 1.38
CXXC1-204ENST00000586365 HNRNPUQ00839 825 aaKnown RBP eCLIP23.7■■□□□ 1.38
CXXC1-204ENST00000586365 CCDC144BQ3MJ40 725 aa23.7■■□□□ 1.38
CXXC1-204ENST00000586365 NUP88Q99567 741 aaPredicted RBP23.7■■□□□ 1.38
CXXC1-204ENST00000586365 BCL11AQ9H165 835 aa23.7■■□□□ 1.38
CXXC1-204ENST00000586365 MSRAQ9UJ68 235 aa23.7■■□□□ 1.38
CXXC1-204ENST00000586365 CTDP1Q9Y5B0 961 aaPredicted RBP23.7■■□□□ 1.38
CXXC1-204ENST00000586365 F5H6K3 240 aa23.69■■□□□ 1.38
CXXC1-204ENST00000586365 ACRP10323 421 aa23.69■■□□□ 1.38
CXXC1-204ENST00000586365 ATP5JP18859 108 aa23.69■■□□□ 1.38
CXXC1-204ENST00000586365 IRX5P78411 483 aaPredicted RBP23.69■■□□□ 1.38
CXXC1-204ENST00000586365 KLRC3Q07444 240 aa23.69■■□□□ 1.38
CXXC1-204ENST00000586365 RAB30Q15771 203 aa23.69■■□□□ 1.38
CXXC1-204ENST00000586365 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.69■■□□□ 1.38
CXXC1-204ENST00000586365 FAM126BQ8IXS8 530 aa23.69■■□□□ 1.38
CXXC1-204ENST00000586365 CPXCR1Q8N123 301 aa23.69■■□□□ 1.38
CXXC1-204ENST00000586365 PPP1R12CQ9BZL4 782 aa23.69■■□□□ 1.38
CXXC1-204ENST00000586365 NYAP2Q9P242 653 aa23.69■■□□□ 1.38
CXXC1-204ENST00000586365 RAB11FIP3O75154 756 aa23.68■■□□□ 1.38
CXXC1-204ENST00000586365 MRPS5P82675 430 aaKnown RBP23.68■■□□□ 1.38
CXXC1-204ENST00000586365 RPAP2Q8IXW5 612 aaPredicted RBP23.68■■□□□ 1.38
CXXC1-204ENST00000586365 ANKRD35Q8N283 1001 aa23.68■■□□□ 1.38
CXXC1-204ENST00000586365 HAUS7Q99871 368 aa23.68■■□□□ 1.38
CXXC1-204ENST00000586365 MTIF3Q9H2K0 278 aaKnown RBP23.68■■□□□ 1.38
CXXC1-204ENST00000586365 IL23AQ9NPF7 189 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms