RNA–Protein interactions for RNA: ENST00000586193.5

TPM4-203, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-203ENST00000586193 PTPN21Q16825 1174 aa8.32□□□□□ -1.08
TPM4-203ENST00000586193 PKDCCQ504Y2 493 aa8.32□□□□□ -1.08
TPM4-203ENST00000586193 HP1BP3Q5SSJ5 553 aaPredicted RBP8.32□□□□□ -1.08
TPM4-203ENST00000586193 DGKHQ86XP1 1220 aa8.32□□□□□ -1.08
TPM4-203ENST00000586193 SVIPQ8NHG7 77 aa8.32□□□□□ -1.08
TPM4-203ENST00000586193 CYB5D2Q8WUJ1 264 aa8.32□□□□□ -1.08
TPM4-203ENST00000586193 KCTD13Q8WZ19 329 aa8.32□□□□□ -1.08
TPM4-203ENST00000586193 WNK4Q96J92 1243 aa8.32□□□□□ -1.08
TPM4-203ENST00000586193 UBA5Q9GZZ9 404 aa8.32□□□□□ -1.08
TPM4-203ENST00000586193 LUC7LQ9NQ29 371 aaKnown RBP8.32□□□□□ -1.08
TPM4-203ENST00000586193 CRTAC1Q9NQ79 661 aa8.32□□□□□ -1.08
TPM4-203ENST00000586193 ENAMQ9NRM1 1142 aa8.32□□□□□ -1.08
TPM4-203ENST00000586193 PPP1R9AQ9ULJ8 1098 aa8.32□□□□□ -1.08
TPM4-203ENST00000586193 TRAF6Q9Y4K3 522 aa8.32□□□□□ -1.08
TPM4-203ENST00000586193 TM4SF5O14894 197 aa8.31□□□□□ -1.08
TPM4-203ENST00000586193 SHOXO15266 292 aa8.31□□□□□ -1.08
TPM4-203ENST00000586193 TMPRSS2O15393 492 aa8.31□□□□□ -1.08
TPM4-203ENST00000586193 DGAT1O75907 488 aa8.31□□□□□ -1.08
TPM4-203ENST00000586193 PRKD3O94806 890 aa8.31□□□□□ -1.08
TPM4-203ENST00000586193 KCNJ6P48051 423 aa8.31□□□□□ -1.08
TPM4-203ENST00000586193 AFF1P51825 1210 aaKnown RBP8.31□□□□□ -1.08
TPM4-203ENST00000586193 SETDB1Q15047 1291 aa8.31□□□□□ -1.08
TPM4-203ENST00000586193 ABCB5Q2M3G0 1257 aa8.31□□□□□ -1.08
TPM4-203ENST00000586193 PRAMEF13Q5VWM6 474 aa8.31□□□□□ -1.08
TPM4-203ENST00000586193 GTF2IRD2BQ6EKJ0 949 aa8.31□□□□□ -1.08
TPM4-203ENST00000586193 POMZP3Q6PJE2 187 aa8.31□□□□□ -1.08
TPM4-203ENST00000586193 CDC37L1Q7L3B6 337 aa8.31□□□□□ -1.08
TPM4-203ENST00000586193 UBE3DQ7Z6J8 389 aa8.31□□□□□ -1.08
TPM4-203ENST00000586193 C11orf96Q7Z7L8 435 aa8.31□□□□□ -1.08
TPM4-203ENST00000586193 GTF2IRD2Q86UP8 949 aa8.31□□□□□ -1.08
TPM4-203ENST00000586193 C7orf61Q8IZ16 206 aa8.31□□□□□ -1.08
TPM4-203ENST00000586193 CRIPAKQ8N1N5 446 aa8.31□□□□□ -1.08
TPM4-203ENST00000586193 ARHGEF39Q8N4T4 335 aa8.31□□□□□ -1.08
TPM4-203ENST00000586193 CRACR2BQ8N4Y2 399 aaPredicted RBP8.31□□□□□ -1.08
TPM4-203ENST00000586193 KLHL23Q8NBE8 558 aa8.31□□□□□ -1.08
TPM4-203ENST00000586193 XAGE3Q8WTP9 111 aa8.31□□□□□ -1.08
TPM4-203ENST00000586193 RCC1LQ96I51 464 aaKnown RBP8.31□□□□□ -1.08
TPM4-203ENST00000586193 GP6Q9HCN6 339 aa8.31□□□□□ -1.08
TPM4-203ENST00000586193 APOBEC2Q9Y235 224 aaKnown RBP8.31□□□□□ -1.08
TPM4-203ENST00000586193 STARD13Q9Y3M8 1113 aa8.31□□□□□ -1.08
TPM4-203ENST00000586193 VSTM5A8MXK1 200 aa8.3□□□□□ -1.08
TPM4-203ENST00000586193 SH3BP5O60239 455 aa8.3□□□□□ -1.08
TPM4-203ENST00000586193 CRTAMO95727 393 aa8.3□□□□□ -1.08
TPM4-203ENST00000586193 ITGA4P13612 1032 aa8.3□□□□□ -1.08
TPM4-203ENST00000586193 ALAS2P22557 587 aa8.3□□□□□ -1.08
TPM4-203ENST00000586193 GFRA1P56159 465 aa8.3□□□□□ -1.08
TPM4-203ENST00000586193 AUHQ13825 339 aaKnown RBP8.3□□□□□ -1.08
TPM4-203ENST00000586193 SLBPQ14493 270 aaKnown RBP eCLIP8.3□□□□□ -1.08
TPM4-203ENST00000586193 ZCCHC8Q6NZY4 707 aaKnown RBP8.3□□□□□ -1.08
TPM4-203ENST00000586193 SV2AQ7L0J3 742 aa8.3□□□□□ -1.08
TPM4-203ENST00000586193 MAMDC2Q7Z304 686 aaPredicted RBP8.3□□□□□ -1.08
TPM4-203ENST00000586193 WFDC8Q8IUA0 241 aa8.3□□□□□ -1.08
TPM4-203ENST00000586193 TPH2Q8IWU9 490 aa8.3□□□□□ -1.08
TPM4-203ENST00000586193 NXPE1Q8N323 547 aa8.3□□□□□ -1.08
TPM4-203ENST00000586193 GALNT11Q8NCW6 608 aa8.3□□□□□ -1.08
TPM4-203ENST00000586193 RNF214Q8ND24 703 aa8.3□□□□□ -1.08
TPM4-203ENST00000586193 DISC1Q9NRI5 854 aa8.3□□□□□ -1.08
TPM4-203ENST00000586193 OBP2AQ9NY56 170 aa8.3□□□□□ -1.08
TPM4-203ENST00000586193 CRIM1Q9NZV1 1036 aa8.3□□□□□ -1.08
TPM4-203ENST00000586193 CGGBP1Q9UFW8 167 aaPredicted RBP8.3□□□□□ -1.08
TPM4-203ENST00000586193 LUC7L2Q9Y383 392 aaKnown RBP8.3□□□□□ -1.08
TPM4-203ENST00000586193 PCDHA9Q9Y5H5 950 aa8.3□□□□□ -1.08
TPM4-203ENST00000586193 ASXL2Q76L83 1435 aa8.29□□□□□ -1.08
TPM4-203ENST00000586193 ZNF891A8MT65 544 aaPredicted RBP8.29□□□□□ -1.08
TPM4-203ENST00000586193 B4E1Z4 1266 aa8.29□□□□□ -1.08
TPM4-203ENST00000586193 IFRD1O00458 451 aaPredicted RBP8.29□□□□□ -1.08
TPM4-203ENST00000586193 ST8SIA5O15466 376 aa8.29□□□□□ -1.08
TPM4-203ENST00000586193 ADAM11O75078 769 aa8.29□□□□□ -1.08
TPM4-203ENST00000586193 SNRPB2P08579 225 aaKnown RBP8.29□□□□□ -1.08
TPM4-203ENST00000586193 CT47B1P0C2W7 299 aaPredicted RBP8.29□□□□□ -1.08
TPM4-203ENST00000586193 MAP4K2Q12851 820 aa8.29□□□□□ -1.08
TPM4-203ENST00000586193 LONRF3Q496Y0 759 aa8.29□□□□□ -1.08
TPM4-203ENST00000586193 C10orf62Q5T681 223 aaPredicted RBP8.29□□□□□ -1.08
TPM4-203ENST00000586193 NBPF12Q5TAG4 269 aaPredicted RBP8.29□□□□□ -1.08
TPM4-203ENST00000586193 IQSEC1Q6DN90 963 aa8.29□□□□□ -1.08
TPM4-203ENST00000586193 C20orf204Q6ZNR8 217 aa8.29□□□□□ -1.08
TPM4-203ENST00000586193 USP53Q70EK8 1073 aa8.29□□□□□ -1.08
TPM4-203ENST00000586193 TMEM145Q8NBT3 493 aa8.29□□□□□ -1.08
TPM4-203ENST00000586193 FANCD2OSQ96PS1 177 aa8.29□□□□□ -1.08
TPM4-203ENST00000586193 SAMD15Q9P1V8 674 aa8.29□□□□□ -1.08
TPM4-203ENST00000586193 CCDC189A1A4V9 331 aa8.28□□□□□ -1.08
TPM4-203ENST00000586193 CST3P01034 146 aaPredicted RBP8.28□□□□□ -1.08
TPM4-203ENST00000586193 ALBP02768 609 aa8.28□□□□□ -1.08
TPM4-203ENST00000586193 MYBL2P10244 700 aa8.28□□□□□ -1.08
TPM4-203ENST00000586193 IL2P60568 153 aa8.28□□□□□ -1.08
TPM4-203ENST00000586193 PPP2R5DQ14738 602 aa8.28□□□□□ -1.08
TPM4-203ENST00000586193 SART3Q15020 963 aaKnown RBP8.28□□□□□ -1.08
TPM4-203ENST00000586193 PRSS53Q2L4Q9 553 aa8.28□□□□□ -1.08
TPM4-203ENST00000586193 CXorf57Q6NSI4 855 aaKnown RBP8.28□□□□□ -1.08
TPM4-203ENST00000586193 GGA1Q9UJY5 639 aa8.28□□□□□ -1.08
TPM4-203ENST00000586193 SYNGAP1Q96PV0 1343 aa8.28□□□□□ -1.08
TPM4-203ENST00000586193 RGS20O76081 388 aa8.27□□□□□ -1.09
TPM4-203ENST00000586193 F2P00734 622 aa8.27□□□□□ -1.09
TPM4-203ENST00000586193 NEFMP07197 916 aa8.27□□□□□ -1.09
TPM4-203ENST00000586193 KCNA6P17658 529 aa8.27□□□□□ -1.09
TPM4-203ENST00000586193 CCND1P24385 295 aa8.27□□□□□ -1.09
TPM4-203ENST00000586193 HOXC12P31275 282 aa8.27□□□□□ -1.09
TPM4-203ENST00000586193 ADCYAP1R1P41586 468 aa8.27□□□□□ -1.09
TPM4-203ENST00000586193 ECI1P42126 302 aa8.27□□□□□ -1.09
TPM4-203ENST00000586193 ZNF445P59923 1031 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms