RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 ZNF296Q8WUU4 475 aaPredicted RBP14.69□□□□□ -0.06
VMP1-202ENST00000585847 R3HDMLQ9H3Y0 253 aa14.69□□□□□ -0.06
VMP1-202ENST00000585847 GOPCQ9HD26 462 aa14.69□□□□□ -0.06
VMP1-202ENST00000585847 FBXO28Q9NVF7 368 aa14.69□□□□□ -0.06
VMP1-202ENST00000585847 RBM28Q9NW13 759 aaKnown RBP14.69□□□□□ -0.06
VMP1-202ENST00000585847 SLC45A1Q9Y2W3 748 aa14.69□□□□□ -0.06
VMP1-202ENST00000585847 A0A0G2JMZ2 1700 aa14.69□□□□□ -0.06
VMP1-202ENST00000585847 COL11A1P12107 1806 aaPredicted RBP14.69□□□□□ -0.06
VMP1-202ENST00000585847 PDHXO00330 501 aa14.68□□□□□ -0.06
VMP1-202ENST00000585847 CPLX1O14810 134 aa14.68□□□□□ -0.06
VMP1-202ENST00000585847 METAP2P50579 478 aaKnown RBP eCLIP14.68□□□□□ -0.06
VMP1-202ENST00000585847 SLC35G1Q2M3R5 365 aa14.68□□□□□ -0.06
VMP1-202ENST00000585847 PRPF38BQ5VTL8 546 aaKnown RBP14.68□□□□□ -0.06
VMP1-202ENST00000585847 TTBK2Q6IQ55 1244 aa14.68□□□□□ -0.06
VMP1-202ENST00000585847 CLEC17AQ6ZS10 378 aa14.68□□□□□ -0.06
VMP1-202ENST00000585847 CATIPQ7Z7H3 387 aa14.68□□□□□ -0.06
VMP1-202ENST00000585847 FAM177A1Q8N128 213 aaPredicted RBP14.68□□□□□ -0.06
VMP1-202ENST00000585847 STAG2Q8N3U4 1231 aa14.68□□□□□ -0.06
VMP1-202ENST00000585847 SMARCC2Q8TAQ2 1214 aa14.68□□□□□ -0.06
VMP1-202ENST00000585847 DCAF4Q8WV16 495 aa14.68□□□□□ -0.06
VMP1-202ENST00000585847 WASF1Q92558 559 aa14.68□□□□□ -0.06
VMP1-202ENST00000585847 MYL10Q9BUA6 226 aa14.68□□□□□ -0.06
VMP1-202ENST00000585847 ASCC2Q9H1I8 757 aaPredicted RBP14.68□□□□□ -0.06
VMP1-202ENST00000585847 KAT14Q9H8E8 782 aa14.68□□□□□ -0.06
VMP1-202ENST00000585847 MTMR7Q9Y216 660 aa14.68□□□□□ -0.06
VMP1-202ENST00000585847 SMCHD1A6NHR9 2005 aa14.68□□□□□ -0.06
VMP1-202ENST00000585847 STK36Q9NRP7 1315 aa14.67□□□□□ -0.06
VMP1-202ENST00000585847 USP17L15C9J2P7 530 aa14.67□□□□□ -0.06
VMP1-202ENST00000585847 USP17L13C9JLJ4 530 aa14.67□□□□□ -0.06
VMP1-202ENST00000585847 USP17L11C9JVI0 530 aa14.67□□□□□ -0.06
VMP1-202ENST00000585847 USP17L18D6R9N7 530 aa14.67□□□□□ -0.06
VMP1-202ENST00000585847 USP17L22D6RA61 530 aa14.67□□□□□ -0.06
VMP1-202ENST00000585847 USP17L17D6RBQ6 530 aa14.67□□□□□ -0.06
VMP1-202ENST00000585847 USP17L19D6RCP7 530 aa14.67□□□□□ -0.06
VMP1-202ENST00000585847 USP17L20D6RJB6 530 aa14.67□□□□□ -0.06
VMP1-202ENST00000585847 BMP3P12645 472 aa14.67□□□□□ -0.06
VMP1-202ENST00000585847 KIF5BP33176 963 aa14.67□□□□□ -0.06
VMP1-202ENST00000585847 ZNF543Q08ER8 600 aa14.67□□□□□ -0.06
VMP1-202ENST00000585847 APOBRQ0VD83 1088 aa14.67□□□□□ -0.06
VMP1-202ENST00000585847 USP17L24Q0WX57 530 aa14.67□□□□□ -0.06
VMP1-202ENST00000585847 GRM4Q14833 912 aa14.67□□□□□ -0.06
VMP1-202ENST00000585847 KCTD1Q719H9 257 aa14.67□□□□□ -0.06
VMP1-202ENST00000585847 RAB11FIP4Q86YS3 637 aa14.67□□□□□ -0.06
VMP1-202ENST00000585847 CCDC83Q8IWF9 413 aa14.67□□□□□ -0.06
VMP1-202ENST00000585847 ZNF654Q8IZM8 581 aa14.67□□□□□ -0.06
VMP1-202ENST00000585847 P2RX7Q99572 595 aaKnown RBP14.67□□□□□ -0.06
VMP1-202ENST00000585847 LARP6Q9BRS8 491 aaKnown RBP14.67□□□□□ -0.06
VMP1-202ENST00000585847 ZCCHC17Q9NP64 241 aaKnown RBP14.67□□□□□ -0.06
VMP1-202ENST00000585847 FAM217BQ9NTX9 383 aaPredicted RBP14.67□□□□□ -0.06
VMP1-202ENST00000585847 MAD2L2Q9UI95 211 aa14.67□□□□□ -0.06
VMP1-202ENST00000585847 FRMPD2Q68DX3 1309 aaPredicted RBP14.66□□□□□ -0.06
VMP1-202ENST00000585847 BAZ2BQ9UIF8 2168 aaKnown RBP14.66□□□□□ -0.06
VMP1-202ENST00000585847 PALM3A6NDB9 673 aaPredicted RBP14.66□□□□□ -0.06
VMP1-202ENST00000585847 GOLGA6L22H0YM25 854 aa14.66□□□□□ -0.06
VMP1-202ENST00000585847 PEX10O60683 326 aa14.66□□□□□ -0.06
VMP1-202ENST00000585847 CYP2C8P10632 490 aa14.66□□□□□ -0.06
VMP1-202ENST00000585847 RXRAP19793 462 aa14.66□□□□□ -0.06
VMP1-202ENST00000585847 DSG3P32926 999 aa14.66□□□□□ -0.06
VMP1-202ENST00000585847 GNAQP50148 359 aa14.66□□□□□ -0.06
VMP1-202ENST00000585847 BTNL9Q6UXG8 535 aa14.66□□□□□ -0.06
VMP1-202ENST00000585847 NOL8Q76FK4 1167 aaKnown RBP14.66□□□□□ -0.06
VMP1-202ENST00000585847 CFHR5Q9BXR6 569 aa14.66□□□□□ -0.06
VMP1-202ENST00000585847 CPVLQ9H3G5 476 aa14.66□□□□□ -0.06
VMP1-202ENST00000585847 ADAMTS5Q9UNA0 930 aa14.66□□□□□ -0.06
VMP1-202ENST00000585847 SPDYE16A6NNV3 312 aaPredicted RBP14.65□□□□□ -0.06
VMP1-202ENST00000585847 GPR25O00155 361 aa14.65□□□□□ -0.06
VMP1-202ENST00000585847 RAD21O60216 631 aa14.65□□□□□ -0.06
VMP1-202ENST00000585847 PLA2G6O60733 806 aa14.65□□□□□ -0.06
VMP1-202ENST00000585847 CNMDO75829 334 aa14.65□□□□□ -0.06
VMP1-202ENST00000585847 GOLGA8HP0CJ92 632 aa14.65□□□□□ -0.06
VMP1-202ENST00000585847 SLC1A4P43007 532 aa14.65□□□□□ -0.06
VMP1-202ENST00000585847 SCRN1Q12765 414 aa14.65□□□□□ -0.06
VMP1-202ENST00000585847 NBPF11Q86T75 865 aa14.65□□□□□ -0.06
VMP1-202ENST00000585847 TRIM22Q8IYM9 498 aa14.65□□□□□ -0.06
VMP1-202ENST00000585847 FAM184AQ8NB25 1140 aa14.65□□□□□ -0.06
VMP1-202ENST00000585847 REPS2Q8NFH8 660 aa14.65□□□□□ -0.06
VMP1-202ENST00000585847 LZTS2Q9BRK4 669 aa14.65□□□□□ -0.06
VMP1-202ENST00000585847 GPCPD1Q9NPB8 672 aa14.65□□□□□ -0.06
VMP1-202ENST00000585847 GOLGA8AA7E2F4 631 aa14.64□□□□□ -0.07
VMP1-202ENST00000585847 DDX11L8A8MPP1 907 aa14.64□□□□□ -0.07
VMP1-202ENST00000585847 TMEM232C9JQI7 657 aa14.64□□□□□ -0.07
VMP1-202ENST00000585847 FKTNO75072 461 aa14.64□□□□□ -0.07
VMP1-202ENST00000585847 LARGE1O95461 756 aa14.64□□□□□ -0.07
VMP1-202ENST00000585847 BRD1O95696 1058 aa14.64□□□□□ -0.07
VMP1-202ENST00000585847 GJB2P29033 226 aa14.64□□□□□ -0.07
VMP1-202ENST00000585847 HERVK_113P62684 666 aa14.64□□□□□ -0.07
VMP1-202ENST00000585847 CRHR2Q13324 411 aa14.64□□□□□ -0.07
VMP1-202ENST00000585847 COG2Q14746 738 aa14.64□□□□□ -0.07
VMP1-202ENST00000585847 TAF1CQ15572 869 aaPredicted RBP14.64□□□□□ -0.07
VMP1-202ENST00000585847 FBXO46Q6PJ61 603 aaPredicted RBP14.64□□□□□ -0.07
VMP1-202ENST00000585847 LBX2Q6XYB7 198 aa14.64□□□□□ -0.07
VMP1-202ENST00000585847 NSUN7Q8NE18 718 aaKnown RBP14.64□□□□□ -0.07
VMP1-202ENST00000585847 CTCFLQ8NI51 663 aaPredicted RBP14.64□□□□□ -0.07
VMP1-202ENST00000585847 ATG4CQ96DT6 458 aa14.64□□□□□ -0.07
VMP1-202ENST00000585847 TANGO6Q9C0B7 1094 aa14.64□□□□□ -0.07
VMP1-202ENST00000585847 TXNRD2Q9NNW7 524 aa14.64□□□□□ -0.07
VMP1-202ENST00000585847 PPP1R9AQ9ULJ8 1098 aa14.64□□□□□ -0.07
VMP1-202ENST00000585847 PTPDC1A2A3K4 754 aa14.63□□□□□ -0.07
VMP1-202ENST00000585847 CYTH3O43739 400 aa14.63□□□□□ -0.07
VMP1-202ENST00000585847 STX6O43752 255 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms