RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 SNAI1O95863 264 aaPredicted RBP17.14■□□□□ 0.33
CSNK1D-224ENST00000584672 MYOGP15173 224 aa17.14■□□□□ 0.33
CSNK1D-224ENST00000584672 STAT3P40763 770 aa17.14■□□□□ 0.33
CSNK1D-224ENST00000584672 SLC4A3P48751 1232 aa17.14■□□□□ 0.33
CSNK1D-224ENST00000584672 OTOP2Q7RTS6 562 aa17.14■□□□□ 0.33
CSNK1D-224ENST00000584672 CRNKL1Q9BZJ0 848 aaKnown RBP17.14■□□□□ 0.33
CSNK1D-224ENST00000584672 IL23AQ9NPF7 189 aa17.14■□□□□ 0.33
CSNK1D-224ENST00000584672 DIS3Q9Y2L1 958 aaKnown RBP17.14■□□□□ 0.33
CSNK1D-224ENST00000584672 TMX2Q9Y320 296 aa17.14■□□□□ 0.33
CSNK1D-224ENST00000584672 HCN4Q9Y3Q4 1203 aa17.14■□□□□ 0.33
CSNK1D-224ENST00000584672 UMODL1Q5DID0 1318 aa17.14■□□□□ 0.33
CSNK1D-224ENST00000584672 A0A0U1RQG5 324 aaPredicted RBP17.13■□□□□ 0.33
CSNK1D-224ENST00000584672 SMIM22K7EJ46 135 aa17.13■□□□□ 0.33
CSNK1D-224ENST00000584672 TRIM27P14373 513 aa17.13■□□□□ 0.33
CSNK1D-224ENST00000584672 CDK7P50613 346 aa17.13■□□□□ 0.33
CSNK1D-224ENST00000584672 POLA2Q14181 598 aa17.13■□□□□ 0.33
CSNK1D-224ENST00000584672 PPP2R2DQ66LE6 453 aa17.13■□□□□ 0.33
CSNK1D-224ENST00000584672 FAM126BQ8IXS8 530 aa17.13■□□□□ 0.33
CSNK1D-224ENST00000584672 TRMT2AQ8IZ69 625 aaKnown RBP17.13■□□□□ 0.33
CSNK1D-224ENST00000584672 HERVK_113Q902F9 699 aa17.13■□□□□ 0.33
CSNK1D-224ENST00000584672 FRAT1Q92837 279 aaPredicted RBP17.13■□□□□ 0.33
CSNK1D-224ENST00000584672 EAF2Q96CJ1 260 aaPredicted RBP17.13■□□□□ 0.33
CSNK1D-224ENST00000584672 SH2D4AQ9H788 454 aa17.13■□□□□ 0.33
CSNK1D-224ENST00000584672 C1orf115Q9H7X2 142 aa17.13■□□□□ 0.33
CSNK1D-224ENST00000584672 XIRP2A4UGR9 3374 aa17.13■□□□□ 0.33
CSNK1D-224ENST00000584672 ELP1O95163 1332 aa17.13■□□□□ 0.33
CSNK1D-224ENST00000584672 BAZ2AQ9UIF9 1905 aaKnown RBP17.13■□□□□ 0.33
CSNK1D-224ENST00000584672 ARVCFO00192 962 aa17.12■□□□□ 0.33
CSNK1D-224ENST00000584672 RFXAPO00287 272 aa17.12■□□□□ 0.33
CSNK1D-224ENST00000584672 VWA5AO00534 786 aa17.12■□□□□ 0.33
CSNK1D-224ENST00000584672 TLR3O15455 904 aaKnown RBP17.12■□□□□ 0.33
CSNK1D-224ENST00000584672 IGSF3O75054 1194 aa17.12■□□□□ 0.33
CSNK1D-224ENST00000584672 FGBP02675 491 aa17.12■□□□□ 0.33
CSNK1D-224ENST00000584672 CT47B1P0C2W7 299 aaPredicted RBP17.12■□□□□ 0.33
CSNK1D-224ENST00000584672 ZNF214Q9UL59 606 aaPredicted RBP17.12■□□□□ 0.33
CSNK1D-224ENST00000584672 LRRC37A2A6NM11 1700 aa17.11■□□□□ 0.33
CSNK1D-224ENST00000584672 DUSP11O75319 330 aaKnown RBP17.11■□□□□ 0.33
CSNK1D-224ENST00000584672 CCL23P55773 120 aa17.11■□□□□ 0.33
CSNK1D-224ENST00000584672 FAM83BQ5T0W9 1011 aa17.11■□□□□ 0.33
CSNK1D-224ENST00000584672 LCORLQ8N3X6 602 aa17.11■□□□□ 0.33
CSNK1D-224ENST00000584672 PCSK9Q8NBP7 692 aaKnown RBP17.11■□□□□ 0.33
CSNK1D-224ENST00000584672 ARHGAP45Q92619 1136 aa17.11■□□□□ 0.33
CSNK1D-224ENST00000584672 DDX11Q96FC9 970 aa17.11■□□□□ 0.33
CSNK1D-224ENST00000584672 MTIF3Q9H2K0 278 aaKnown RBP17.11■□□□□ 0.33
CSNK1D-224ENST00000584672 DCP1AQ9NPI6 582 aaPredicted RBP17.11■□□□□ 0.33
CSNK1D-224ENST00000584672 PPP1R9AQ9ULJ8 1098 aa17.11■□□□□ 0.33
CSNK1D-224ENST00000584672 PRRC2BQ5JSZ5 2229 aaKnown RBP17.11■□□□□ 0.33
CSNK1D-224ENST00000584672 CYP2D7A0A087X1C5 515 aa17.1■□□□□ 0.33
CSNK1D-224ENST00000584672 FAM86C2PA6NEL3 165 aa17.1■□□□□ 0.33
CSNK1D-224ENST00000584672 EEF2P13639 858 aaKnown RBP17.1■□□□□ 0.33
CSNK1D-224ENST00000584672 BEX3Q00994 111 aa17.1■□□□□ 0.33
CSNK1D-224ENST00000584672 ACVR2BQ13705 512 aa17.1■□□□□ 0.33
CSNK1D-224ENST00000584672 GNASQ5JWF2 1037 aa17.1■□□□□ 0.33
CSNK1D-224ENST00000584672 SNRNP48Q6IEG0 339 aaKnown RBP17.1■□□□□ 0.33
CSNK1D-224ENST00000584672 REPS2Q8NFH8 660 aa17.1■□□□□ 0.33
CSNK1D-224ENST00000584672 SSH3Q8TE77 659 aa17.1■□□□□ 0.33
CSNK1D-224ENST00000584672 NUP88Q99567 741 aaPredicted RBP17.1■□□□□ 0.33
CSNK1D-224ENST00000584672 HIPK3Q9H422 1215 aa17.1■□□□□ 0.33
CSNK1D-224ENST00000584672 CERS4Q9HA82 394 aa17.1■□□□□ 0.33
CSNK1D-224ENST00000584672 ADAMTS5Q9UNA0 930 aa17.1■□□□□ 0.33
CSNK1D-224ENST00000584672 SYNGAP1Q96PV0 1343 aa17.1■□□□□ 0.33
CSNK1D-224ENST00000584672 ZBBXA8MT70 800 aa17.09■□□□□ 0.33
CSNK1D-224ENST00000584672 PDE6AP16499 860 aa17.09■□□□□ 0.33
CSNK1D-224ENST00000584672 CST5P28325 142 aaPredicted RBP17.09■□□□□ 0.33
CSNK1D-224ENST00000584672 AAK1Q2M2I8 961 aa17.09■□□□□ 0.33
CSNK1D-224ENST00000584672 CCDC144BQ3MJ40 725 aa17.09■□□□□ 0.33
CSNK1D-224ENST00000584672 TMEM31Q5JXX7 168 aa17.09■□□□□ 0.33
CSNK1D-224ENST00000584672 SLC9C2Q5TAH2 1124 aa17.09■□□□□ 0.33
CSNK1D-224ENST00000584672 KRT40Q6A162 431 aa17.09■□□□□ 0.33
CSNK1D-224ENST00000584672 ARMT1Q9H993 441 aa17.09■□□□□ 0.33
CSNK1D-224ENST00000584672 SPC25Q9HBM1 224 aa17.09■□□□□ 0.33
CSNK1D-224ENST00000584672 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.09■□□□□ 0.33
CSNK1D-224ENST00000584672 SWAP70Q9UH65 585 aa17.09■□□□□ 0.33
CSNK1D-224ENST00000584672 RIPK3Q9Y572 518 aa17.09■□□□□ 0.33
CSNK1D-224ENST00000584672 ZNF532Q9HCE3 1301 aa17.09■□□□□ 0.33
CSNK1D-224ENST00000584672 PRKAB2O43741 272 aa17.08■□□□□ 0.32
CSNK1D-224ENST00000584672 TMEM57Q8N5G2 664 aa17.08■□□□□ 0.32
CSNK1D-224ENST00000584672 UPF3AQ9H1J1 476 aaKnown RBP17.08■□□□□ 0.32
CSNK1D-224ENST00000584672 SLC4A7Q9Y6M7 1214 aa17.08■□□□□ 0.32
CSNK1D-224ENST00000584672 ERC2O15083 957 aa17.07■□□□□ 0.32
CSNK1D-224ENST00000584672 CD4P01730 458 aa17.07■□□□□ 0.32
CSNK1D-224ENST00000584672 COPB2P35606 906 aa17.07■□□□□ 0.32
CSNK1D-224ENST00000584672 GJA9P57773 515 aa17.07■□□□□ 0.32
CSNK1D-224ENST00000584672 ATP8B2P98198 1209 aa17.07■□□□□ 0.32
CSNK1D-224ENST00000584672 SLFNL1Q499Z3 407 aa17.07■□□□□ 0.32
CSNK1D-224ENST00000584672 CXCL17Q6UXB2 119 aa17.07■□□□□ 0.32
CSNK1D-224ENST00000584672 MAMDC4Q6UXC1 1216 aa17.07■□□□□ 0.32
CSNK1D-224ENST00000584672 AACSQ86V21 672 aa17.07■□□□□ 0.32
CSNK1D-224ENST00000584672 CPXCR1Q8N123 301 aa17.07■□□□□ 0.32
CSNK1D-224ENST00000584672 KHSRPQ92945 711 aaKnown RBP eCLIP17.07■□□□□ 0.32
CSNK1D-224ENST00000584672 TEX13BQ9BXU2 312 aa17.07■□□□□ 0.32
CSNK1D-224ENST00000584672 BCL11AQ9H165 835 aa17.07■□□□□ 0.32
CSNK1D-224ENST00000584672 GOPCQ9HD26 462 aa17.07■□□□□ 0.32
CSNK1D-224ENST00000584672 TRANK1O15050 2925 aa17.07■□□□□ 0.32
CSNK1D-224ENST00000584672 DNAJC25-GNG10A0A024R161 153 aa17.06■□□□□ 0.32
CSNK1D-224ENST00000584672 PTGS1P23219 599 aa17.06■□□□□ 0.32
CSNK1D-224ENST00000584672 CDK8P49336 464 aa17.06■□□□□ 0.32
CSNK1D-224ENST00000584672 NOL8Q76FK4 1167 aaKnown RBP17.06■□□□□ 0.32
CSNK1D-224ENST00000584672 MSL3Q8N5Y2 521 aaKnown RBP17.06■□□□□ 0.32
CSNK1D-224ENST00000584672 SCLYQ96I15 445 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms