RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 MSL3Q8N5Y2 521 aaKnown RBP11.57□□□□□ -0.56
CDK5RAP3-227ENST00000583352 TRIM43Q96BQ3 446 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP3-227ENST00000583352 DDX11Q96FC9 970 aa11.57□□□□□ -0.56
CDK5RAP3-227ENST00000583352 STRBPQ96SI9 672 aaKnown RBP11.57□□□□□ -0.56
CDK5RAP3-227ENST00000583352 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.57□□□□□ -0.56
CDK5RAP3-227ENST00000583352 TEX13BQ9BXU2 312 aa11.57□□□□□ -0.56
CDK5RAP3-227ENST00000583352 ECHDC1Q9NTX5 307 aa11.57□□□□□ -0.56
CDK5RAP3-227ENST00000583352 NYAP2Q9P242 653 aa11.57□□□□□ -0.56
CDK5RAP3-227ENST00000583352 CTDP1Q9Y5B0 961 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP3-227ENST00000583352 TACC3Q9Y6A5 838 aa11.57□□□□□ -0.56
CDK5RAP3-227ENST00000583352 GREB1LQ9C091 1923 aaPredicted RBP11.56□□□□□ -0.56
CDK5RAP3-227ENST00000583352 A0A1W2PQ45 241 aaPredicted RBP11.56□□□□□ -0.56
CDK5RAP3-227ENST00000583352 A0A1W2PQY0 241 aa11.56□□□□□ -0.56
CDK5RAP3-227ENST00000583352 SMCHD1A6NHR9 2005 aa11.56□□□□□ -0.56
CDK5RAP3-227ENST00000583352 MINDY4BA8MYZ0 360 aa11.56□□□□□ -0.56
CDK5RAP3-227ENST00000583352 F5H6K3 240 aa11.56□□□□□ -0.56
CDK5RAP3-227ENST00000583352 NDUFB10O96000 172 aa11.56□□□□□ -0.56
CDK5RAP3-227ENST00000583352 RASA1P20936 1047 aa11.56□□□□□ -0.56
CDK5RAP3-227ENST00000583352 SMAD3P84022 425 aaKnown RBP11.56□□□□□ -0.56
CDK5RAP3-227ENST00000583352 KLRC3Q07444 240 aa11.56□□□□□ -0.56
CDK5RAP3-227ENST00000583352 SNRNP48Q6IEG0 339 aaKnown RBP11.56□□□□□ -0.56
CDK5RAP3-227ENST00000583352 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.56□□□□□ -0.56
CDK5RAP3-227ENST00000583352 STK11IPQ8N1F8 1099 aa11.56□□□□□ -0.56
CDK5RAP3-227ENST00000583352 KBTBD3Q8NAB2 608 aa11.56□□□□□ -0.56
CDK5RAP3-227ENST00000583352 APPBP2Q92624 585 aa11.56□□□□□ -0.56
CDK5RAP3-227ENST00000583352 GPATCH3Q96I76 525 aa11.56□□□□□ -0.56
CDK5RAP3-227ENST00000583352 NUP88Q99567 741 aaPredicted RBP11.56□□□□□ -0.56
CDK5RAP3-227ENST00000583352 TSEN34Q9BSV6 310 aaKnown RBP11.56□□□□□ -0.56
CDK5RAP3-227ENST00000583352 LNPKQ9C0E8 428 aa11.56□□□□□ -0.56
CDK5RAP3-227ENST00000583352 FAM184BQ9ULE4 1060 aa11.56□□□□□ -0.56
CDK5RAP3-227ENST00000583352 GSG1L2A8MUP6 293 aa11.55□□□□□ -0.56
CDK5RAP3-227ENST00000583352 KIAA0355O15063 1070 aa11.55□□□□□ -0.56
CDK5RAP3-227ENST00000583352 PQBP1O60828 265 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP3-227ENST00000583352 ZBED4O75132 1171 aa11.55□□□□□ -0.56
CDK5RAP3-227ENST00000583352 ADAMTS4O75173 837 aa11.55□□□□□ -0.56
CDK5RAP3-227ENST00000583352 RAG1P15918 1043 aa11.55□□□□□ -0.56
CDK5RAP3-227ENST00000583352 SLC4A3P48751 1232 aa11.55□□□□□ -0.56
CDK5RAP3-227ENST00000583352 PRPF38AQ8NAV1 312 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP3-227ENST00000583352 LENG1Q96BZ8 264 aaPredicted RBP11.55□□□□□ -0.56
CDK5RAP3-227ENST00000583352 CDX2Q99626 313 aaPredicted RBP11.55□□□□□ -0.56
CDK5RAP3-227ENST00000583352 SEMA6BQ9H3T3 888 aa11.55□□□□□ -0.56
CDK5RAP3-227ENST00000583352 ZNF287Q9HBT7 754 aa11.55□□□□□ -0.56
CDK5RAP3-227ENST00000583352 STARD7Q9NQZ5 370 aa11.55□□□□□ -0.56
CDK5RAP3-227ENST00000583352 CLIP2Q9UDT6 1046 aa11.55□□□□□ -0.56
CDK5RAP3-227ENST00000583352 ZHX1Q9UKY1 873 aaPredicted RBP11.55□□□□□ -0.56
CDK5RAP3-227ENST00000583352 SYNGAP1Q96PV0 1343 aa11.55□□□□□ -0.56
CDK5RAP3-227ENST00000583352 SZT2Q5T011 3432 aa11.54□□□□□ -0.56
CDK5RAP3-227ENST00000583352 MOXD2PA6NHM9 499 aa11.54□□□□□ -0.56
CDK5RAP3-227ENST00000583352 DCDC2CA8MYV0 355 aa11.54□□□□□ -0.56
CDK5RAP3-227ENST00000583352 ATP2A1O14983 1001 aa11.54□□□□□ -0.56
CDK5RAP3-227ENST00000583352 RNF113AO15541 343 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP3-227ENST00000583352 ZFYP08048 801 aaPredicted RBP11.54□□□□□ -0.56
CDK5RAP3-227ENST00000583352 GNAT2P19087 354 aa11.54□□□□□ -0.56
CDK5RAP3-227ENST00000583352 TDO2P48775 406 aa11.54□□□□□ -0.56
CDK5RAP3-227ENST00000583352 ACLYP53396 1101 aa11.54□□□□□ -0.56
CDK5RAP3-227ENST00000583352 FPGSQ05932 587 aa11.54□□□□□ -0.56
CDK5RAP3-227ENST00000583352 MAMDC4Q6UXC1 1216 aa11.54□□□□□ -0.56
CDK5RAP3-227ENST00000583352 ZNF444Q8N0Y2 327 aaPredicted RBP11.54□□□□□ -0.56
CDK5RAP3-227ENST00000583352 CPXCR1Q8N123 301 aa11.54□□□□□ -0.56
CDK5RAP3-227ENST00000583352 NUP133Q8WUM0 1156 aa11.54□□□□□ -0.56
CDK5RAP3-227ENST00000583352 OSBP2Q969R2 916 aa11.54□□□□□ -0.56
CDK5RAP3-227ENST00000583352 RNPC3Q96LT9 517 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP3-227ENST00000583352 TOX2Q96NM4 488 aa11.54□□□□□ -0.56
CDK5RAP3-227ENST00000583352 COL25A1Q9BXS0 654 aaPredicted RBP11.54□□□□□ -0.56
CDK5RAP3-227ENST00000583352 TMEM39AQ9NV64 488 aa11.54□□□□□ -0.56
CDK5RAP3-227ENST00000583352 RIPK3Q9Y572 518 aa11.54□□□□□ -0.56
CDK5RAP3-227ENST00000583352 SYNRGQ9UMZ2 1314 aa11.54□□□□□ -0.56
CDK5RAP3-227ENST00000583352 RANBP2P49792 3224 aaKnown RBP11.53□□□□□ -0.56
CDK5RAP3-227ENST00000583352 DNAJC25-GNG10A0A024R161 153 aa11.53□□□□□ -0.56
CDK5RAP3-227ENST00000583352 IGKV6D-41A0A0C4DH26 115 aa11.53□□□□□ -0.56
CDK5RAP3-227ENST00000583352 GPAA1O43292 621 aa11.53□□□□□ -0.56
CDK5RAP3-227ENST00000583352 PRDM1O75626 825 aa11.53□□□□□ -0.56
CDK5RAP3-227ENST00000583352 SNAI1O95863 264 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP3-227ENST00000583352 APPP05067 770 aa11.53□□□□□ -0.56
CDK5RAP3-227ENST00000583352 ITGB8P26012 769 aa11.53□□□□□ -0.56
CDK5RAP3-227ENST00000583352 LRRFIP1Q32MZ4 808 aaKnown RBP11.53□□□□□ -0.56
CDK5RAP3-227ENST00000583352 ANKRD33Q7Z3H0 272 aa11.53□□□□□ -0.56
CDK5RAP3-227ENST00000583352 ZNF467Q7Z7K2 595 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP3-227ENST00000583352 PLEKHM2Q8IWE5 1019 aa11.53□□□□□ -0.56
CDK5RAP3-227ENST00000583352 ANKRD35Q8N283 1001 aa11.53□□□□□ -0.56
CDK5RAP3-227ENST00000583352 KLHDC9Q8NEP7 349 aa11.53□□□□□ -0.56
CDK5RAP3-227ENST00000583352 MAFAQ8NHW3 353 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP3-227ENST00000583352 KIFC2Q96AC6 838 aa11.53□□□□□ -0.56
CDK5RAP3-227ENST00000583352 SPC25Q9HBM1 224 aa11.53□□□□□ -0.56
CDK5RAP3-227ENST00000583352 RAVER2Q9HCJ3 691 aaKnown RBP11.53□□□□□ -0.56
CDK5RAP3-227ENST00000583352 EPB41L4AQ9HCS5 686 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP3-227ENST00000583352 FBXO40Q9UH90 709 aa11.53□□□□□ -0.56
CDK5RAP3-227ENST00000583352 FEM1BQ9UK73 627 aa11.53□□□□□ -0.56
CDK5RAP3-227ENST00000583352 SYNPO2Q9UMS6 1093 aa11.53□□□□□ -0.56
CDK5RAP3-227ENST00000583352 MYH4Q9Y623 1939 aa11.52□□□□□ -0.56
CDK5RAP3-227ENST00000583352 TMEM265A0A087WTH1 108 aa11.52□□□□□ -0.57
CDK5RAP3-227ENST00000583352 DUSP11O75319 330 aaKnown RBP11.52□□□□□ -0.57
CDK5RAP3-227ENST00000583352 TTLL1O95922 423 aa11.52□□□□□ -0.57
CDK5RAP3-227ENST00000583352 CST5P28325 142 aaPredicted RBP11.52□□□□□ -0.57
CDK5RAP3-227ENST00000583352 OAZ1P54368 228 aa11.52□□□□□ -0.57
CDK5RAP3-227ENST00000583352 EPHB4P54760 987 aa11.52□□□□□ -0.57
CDK5RAP3-227ENST00000583352 ACVR2BQ13705 512 aa11.52□□□□□ -0.57
CDK5RAP3-227ENST00000583352 KCNA10Q16322 511 aa11.52□□□□□ -0.57
CDK5RAP3-227ENST00000583352 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.52□□□□□ -0.57
CDK5RAP3-227ENST00000583352 PCSK9Q8NBP7 692 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms