RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 OR14I1A6ND48 311 aa7.24□□□□□ -1.25
SMCHD1-208ENST00000583344 MEIS3P2A8K0S8 358 aa7.24□□□□□ -1.25
SMCHD1-208ENST00000583344 INHBBP09529 407 aa7.24□□□□□ -1.25
SMCHD1-208ENST00000583344 CCNFP41002 786 aa7.24□□□□□ -1.25
SMCHD1-208ENST00000583344 KIR3DS1Q14943 382 aa7.24□□□□□ -1.25
SMCHD1-208ENST00000583344 LDLRAD1Q5T700 205 aa7.24□□□□□ -1.25
SMCHD1-208ENST00000583344 TTLL10Q6ZVT0 673 aa7.24□□□□□ -1.25
SMCHD1-208ENST00000583344 SLITRK4Q8IW52 837 aa7.24□□□□□ -1.25
SMCHD1-208ENST00000583344 SLC9A7Q96T83 725 aa7.24□□□□□ -1.25
SMCHD1-208ENST00000583344 TNFRSF10CO14798 259 aa7.23□□□□□ -1.25
SMCHD1-208ENST00000583344 SSPNQ14714 243 aa7.23□□□□□ -1.25
SMCHD1-208ENST00000583344 LILRA6Q6PI73 481 aa7.23□□□□□ -1.25
SMCHD1-208ENST00000583344 KIAA0825Q8IV33 1275 aa7.23□□□□□ -1.25
SMCHD1-208ENST00000583344 SPON2Q9BUD6 331 aa7.23□□□□□ -1.25
SMCHD1-208ENST00000583344 NT5C1AQ9BXI3 368 aa7.23□□□□□ -1.25
SMCHD1-208ENST00000583344 CNOT6Q9ULM6 557 aaKnown RBP7.23□□□□□ -1.25
SMCHD1-208ENST00000583344 GPR55Q9Y2T6 319 aaPredicted RBP7.23□□□□□ -1.25
SMCHD1-208ENST00000583344 CTSKP43235 329 aa7.22□□□□□ -1.25
SMCHD1-208ENST00000583344 RTP1P59025 263 aa7.22□□□□□ -1.25
SMCHD1-208ENST00000583344 CRTC3Q6UUV7 619 aa7.22□□□□□ -1.25
SMCHD1-208ENST00000583344 TMEM87AQ8NBN3 555 aa7.22□□□□□ -1.25
SMCHD1-208ENST00000583344 FCRL2Q96LA5 508 aaPredicted RBP7.22□□□□□ -1.25
SMCHD1-208ENST00000583344 CRTAC1Q9NQ79 661 aa7.22□□□□□ -1.25
SMCHD1-208ENST00000583344 MBD1Q9UIS9 605 aaPredicted RBP7.22□□□□□ -1.25
SMCHD1-208ENST00000583344 FBXL21Q9UKT6 434 aa7.22□□□□□ -1.25
SMCHD1-208ENST00000583344 PCDHB12Q9Y5F1 795 aa7.22□□□□□ -1.25
SMCHD1-208ENST00000583344 FADS2P1A8MWK0 482 aa7.21□□□□□ -1.26
SMCHD1-208ENST00000583344 SRSF3P84103 164 aaKnown RBP7.21□□□□□ -1.26
SMCHD1-208ENST00000583344 LRRFIP1Q32MZ4 808 aaKnown RBP7.21□□□□□ -1.26
SMCHD1-208ENST00000583344 CDADC1Q9BWV3 514 aa7.21□□□□□ -1.26
SMCHD1-208ENST00000583344 ERVK13-1Q9NX77 482 aa7.21□□□□□ -1.26
SMCHD1-208ENST00000583344 KCTD3Q9Y597 815 aa7.21□□□□□ -1.26
SMCHD1-208ENST00000583344 C9IYK1 514 aa7.2□□□□□ -1.26
SMCHD1-208ENST00000583344 ACRP10323 421 aa7.2□□□□□ -1.26
SMCHD1-208ENST00000583344 PNLIPP16233 465 aa7.2□□□□□ -1.26
SMCHD1-208ENST00000583344 ZNF16P17020 682 aaPredicted RBP7.2□□□□□ -1.26
SMCHD1-208ENST00000583344 VIPR1P32241 457 aa7.2□□□□□ -1.26
SMCHD1-208ENST00000583344 CEBPAP49715 358 aaPredicted RBP7.2□□□□□ -1.26
SMCHD1-208ENST00000583344 EPHB3P54753 998 aa7.2□□□□□ -1.26
SMCHD1-208ENST00000583344 AUHQ13825 339 aaKnown RBP7.2□□□□□ -1.26
SMCHD1-208ENST00000583344 HSF5Q4G112 596 aaPredicted RBP7.2□□□□□ -1.26
SMCHD1-208ENST00000583344 TNFRSF10DQ9UBN6 386 aa7.2□□□□□ -1.26
SMCHD1-208ENST00000583344 SHOXO15266 292 aa7.19□□□□□ -1.26
SMCHD1-208ENST00000583344 ZNF205O95201 554 aa7.19□□□□□ -1.26
SMCHD1-208ENST00000583344 PI3P19957 117 aa7.19□□□□□ -1.26
SMCHD1-208ENST00000583344 BMP8BP34820 402 aa7.19□□□□□ -1.26
SMCHD1-208ENST00000583344 TDRD10Q5VZ19 366 aaKnown RBP7.19□□□□□ -1.26
SMCHD1-208ENST00000583344 BCL11AQ9H165 835 aa7.19□□□□□ -1.26
SMCHD1-208ENST00000583344 AP5S1Q9NUS5 200 aa7.19□□□□□ -1.26
SMCHD1-208ENST00000583344 SUCOQ9UBS9 1254 aaKnown RBP7.19□□□□□ -1.26
SMCHD1-208ENST00000583344 ZNRF3Q9ULT6 936 aa7.19□□□□□ -1.26
SMCHD1-208ENST00000583344 PCDHGB7Q9Y5F8 929 aa7.19□□□□□ -1.26
SMCHD1-208ENST00000583344 TAF6LQ9Y6J9 622 aa7.19□□□□□ -1.26
SMCHD1-208ENST00000583344 ZNF76P36508 570 aa7.18□□□□□ -1.26
SMCHD1-208ENST00000583344 ZNF394Q53GI3 561 aa7.18□□□□□ -1.26
SMCHD1-208ENST00000583344 SLCO6A1Q86UG4 719 aa7.18□□□□□ -1.26
SMCHD1-208ENST00000583344 PANK1Q8TE04 598 aa7.18□□□□□ -1.26
SMCHD1-208ENST00000583344 CNTD2Q9H8S5 307 aa7.18□□□□□ -1.26
SMCHD1-208ENST00000583344 SIRT5Q9NXA8 310 aa7.18□□□□□ -1.26
SMCHD1-208ENST00000583344 HRKO00198 91 aa7.17□□□□□ -1.26
SMCHD1-208ENST00000583344 VAV1P15498 845 aa7.17□□□□□ -1.26
SMCHD1-208ENST00000583344 BMP7P18075 431 aa7.17□□□□□ -1.26
SMCHD1-208ENST00000583344 HOXA5P20719 270 aa7.17□□□□□ -1.26
SMCHD1-208ENST00000583344 ERVFRD-1P60508 538 aa7.17□□□□□ -1.26
SMCHD1-208ENST00000583344 ZNF385BQ569K4 471 aa7.17□□□□□ -1.26
SMCHD1-208ENST00000583344 GALNT18Q6P9A2 607 aa7.17□□□□□ -1.26
SMCHD1-208ENST00000583344 USP48Q86UV5 1035 aa7.17□□□□□ -1.26
SMCHD1-208ENST00000583344 PPFIBP1Q86W92 1011 aa7.17□□□□□ -1.26
SMCHD1-208ENST00000583344 CCDC144CPQ8IYA2 1237 aa7.17□□□□□ -1.26
SMCHD1-208ENST00000583344 C7orf61Q8IZ16 206 aa7.17□□□□□ -1.26
SMCHD1-208ENST00000583344 DSCC1Q9BVC3 393 aa7.17□□□□□ -1.26
SMCHD1-208ENST00000583344 BACH2Q9BYV9 841 aa7.17□□□□□ -1.26
SMCHD1-208ENST00000583344 RAPGEFL1Q9UHV5 662 aa7.17□□□□□ -1.26
SMCHD1-208ENST00000583344 WTIPA6NIX2 430 aaPredicted RBP7.16□□□□□ -1.26
SMCHD1-208ENST00000583344 RFXAPO00287 272 aa7.16□□□□□ -1.26
SMCHD1-208ENST00000583344 PRKCAP17252 672 aa7.16□□□□□ -1.26
SMCHD1-208ENST00000583344 YBX1P67809 324 aaKnown RBP7.16□□□□□ -1.26
SMCHD1-208ENST00000583344 FANCCQ00597 558 aa7.16□□□□□ -1.26
SMCHD1-208ENST00000583344 RTP2Q5QGT7 225 aa7.16□□□□□ -1.26
SMCHD1-208ENST00000583344 TCERG1LQ5VWI1 586 aa7.16□□□□□ -1.26
SMCHD1-208ENST00000583344 DCAF15Q66K64 600 aa7.16□□□□□ -1.26
SMCHD1-208ENST00000583344 NUP43Q8NFH3 380 aa7.16□□□□□ -1.26
SMCHD1-208ENST00000583344 SIGLEC10Q96LC7 697 aa7.16□□□□□ -1.26
SMCHD1-208ENST00000583344 C20orf173Q96LM9 149 aa7.16□□□□□ -1.26
SMCHD1-208ENST00000583344 FAM86C1Q9NVL1 165 aa7.16□□□□□ -1.26
SMCHD1-208ENST00000583344 IRAK3Q9Y616 596 aa7.16□□□□□ -1.26
SMCHD1-208ENST00000583344 NUDT19A8MXV4 375 aa7.15□□□□□ -1.26
SMCHD1-208ENST00000583344 CDR1P51861 262 aa7.15□□□□□ -1.26
SMCHD1-208ENST00000583344 CTSWP56202 376 aa7.15□□□□□ -1.26
SMCHD1-208ENST00000583344 ZYXQ15942 572 aaKnown RBP7.15□□□□□ -1.26
SMCHD1-208ENST00000583344 TMEM52Q8NDY8 209 aa7.15□□□□□ -1.26
SMCHD1-208ENST00000583344 DHRS1Q96LJ7 313 aa7.15□□□□□ -1.26
SMCHD1-208ENST00000583344 FERD3LQ96RJ6 166 aa7.15□□□□□ -1.26
SMCHD1-208ENST00000583344 JMJD8Q96S16 334 aa7.15□□□□□ -1.26
SMCHD1-208ENST00000583344 ZCCHC4Q9H5U6 513 aa7.15□□□□□ -1.26
SMCHD1-208ENST00000583344 PARD6AQ9NPB6 346 aa7.15□□□□□ -1.26
SMCHD1-208ENST00000583344 PRR13Q9NZ81 148 aa7.15□□□□□ -1.26
SMCHD1-208ENST00000583344 KLHL14Q9P2G3 628 aa7.15□□□□□ -1.26
SMCHD1-208ENST00000583344 IMPACTQ9P2X3 320 aa7.15□□□□□ -1.26
SMCHD1-208ENST00000583344 PPT2Q9UMR5 302 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms