RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 ZHX2Q9Y6X8 837 aa16.89■□□□□ 0.29
SENP3-208ENST00000583277 C19orf81C9J6K1 198 aa16.88■□□□□ 0.29
SENP3-208ENST00000583277 TMEM232C9JQI7 657 aa16.88■□□□□ 0.29
SENP3-208ENST00000583277 CALML3P27482 149 aa16.88■□□□□ 0.29
SENP3-208ENST00000583277 KIF23Q02241 960 aaPredicted RBP16.88■□□□□ 0.29
SENP3-208ENST00000583277 SPP2Q13103 211 aa16.88■□□□□ 0.29
SENP3-208ENST00000583277 GNL2Q13823 731 aaKnown RBP16.88■□□□□ 0.29
SENP3-208ENST00000583277 KIAA1755Q5JYT7 1200 aa16.88■□□□□ 0.29
SENP3-208ENST00000583277 FAM83BQ5T0W9 1011 aa16.88■□□□□ 0.29
SENP3-208ENST00000583277 SYDE2Q5VT97 1194 aa16.88■□□□□ 0.29
SENP3-208ENST00000583277 HEATR3Q7Z4Q2 680 aa16.88■□□□□ 0.29
SENP3-208ENST00000583277 FAM160B2Q86V87 743 aa16.88■□□□□ 0.29
SENP3-208ENST00000583277 RBM46Q8TBY0 533 aaKnown RBP16.88■□□□□ 0.29
SENP3-208ENST00000583277 ZNF526Q8TF50 670 aaPredicted RBP16.88■□□□□ 0.29
SENP3-208ENST00000583277 PIGSQ96S52 555 aa16.88■□□□□ 0.29
SENP3-208ENST00000583277 PHF20Q9BVI0 1012 aa16.88■□□□□ 0.29
SENP3-208ENST00000583277 JMJD4Q9H9V9 463 aa16.88■□□□□ 0.29
SENP3-208ENST00000583277 VAT1LQ9HCJ6 419 aa16.88■□□□□ 0.29
SENP3-208ENST00000583277 GJB4Q9NTQ9 266 aa16.88■□□□□ 0.29
SENP3-208ENST00000583277 TRPM7Q96QT4 1865 aa16.87■□□□□ 0.29
SENP3-208ENST00000583277 PNMA6FA0A0J9YX94 578 aa16.87■□□□□ 0.29
SENP3-208ENST00000583277 DDX11L8A8MPP1 907 aa16.87■□□□□ 0.29
SENP3-208ENST00000583277 ZBTB5O15062 677 aa16.87■□□□□ 0.29
SENP3-208ENST00000583277 SLC16A2P36021 539 aa16.87■□□□□ 0.29
SENP3-208ENST00000583277 FKBP1BP68106 108 aa16.87■□□□□ 0.29
SENP3-208ENST00000583277 WWC2Q6AWC2 1192 aa16.87■□□□□ 0.29
SENP3-208ENST00000583277 GALNT17Q6IS24 598 aa16.87■□□□□ 0.29
SENP3-208ENST00000583277 PPP1R18Q6NYC8 613 aa16.87■□□□□ 0.29
SENP3-208ENST00000583277 C12orf42Q96LP6 360 aa16.87■□□□□ 0.29
SENP3-208ENST00000583277 FOXP1Q9H334 677 aaPredicted RBP16.87■□□□□ 0.29
SENP3-208ENST00000583277 FEM1BQ9UK73 627 aa16.87■□□□□ 0.29
SENP3-208ENST00000583277 STXBP3O00186 592 aa16.86■□□□□ 0.29
SENP3-208ENST00000583277 U2AF2P26368 475 aaKnown RBP eCLIP16.86■□□□□ 0.294e-7■■■□□ 15.2
SENP3-208ENST00000583277 KRT2P35908 639 aa16.86■□□□□ 0.29
SENP3-208ENST00000583277 NFKBIBQ15653 356 aa16.86■□□□□ 0.29
SENP3-208ENST00000583277 ATL3Q6DD88 541 aa16.86■□□□□ 0.29
SENP3-208ENST00000583277 ERO1BQ86YB8 467 aa16.86■□□□□ 0.29
SENP3-208ENST00000583277 DIS3L2Q8IYB7 885 aaKnown RBP16.86■□□□□ 0.29
SENP3-208ENST00000583277 GPKOWQ92917 476 aaPredicted RBP eCLIP16.86■□□□□ 0.29
SENP3-208ENST00000583277 KCNJ14Q9UNX9 436 aa16.86■□□□□ 0.29
SENP3-208ENST00000583277 AFG3L2Q9Y4W6 797 aa16.86■□□□□ 0.29
SENP3-208ENST00000583277 PARP14Q460N5 1801 aa16.86■□□□□ 0.29
SENP3-208ENST00000583277 LOC285556D6RIA3 1793 aa16.86■□□□□ 0.29
SENP3-208ENST00000583277 TRIM75PA6NK02 468 aa16.85■□□□□ 0.29
SENP3-208ENST00000583277 VCAM1P19320 739 aa16.85■□□□□ 0.29
SENP3-208ENST00000583277 PTMSP20962 102 aa16.85■□□□□ 0.29
SENP3-208ENST00000583277 MCM4P33991 863 aa16.85■□□□□ 0.29
SENP3-208ENST00000583277 NAPAP54920 295 aa16.85■□□□□ 0.29
SENP3-208ENST00000583277 NLRP5P59047 1200 aa16.85■□□□□ 0.29
SENP3-208ENST00000583277 KRT85P78386 507 aa16.85■□□□□ 0.29
SENP3-208ENST00000583277 PPATQ06203 517 aa16.85■□□□□ 0.29
SENP3-208ENST00000583277 TRAF1Q13077 416 aa16.85■□□□□ 0.29
SENP3-208ENST00000583277 CDC37Q16543 378 aaPredicted RBP16.85■□□□□ 0.29
SENP3-208ENST00000583277 TMOD4Q9NZQ9 345 aa16.85■□□□□ 0.29
SENP3-208ENST00000583277 ESYT2A0FGR8 921 aa16.85■□□□□ 0.29
SENP3-208ENST00000583277 SPDYE5A6NIY4 337 aa16.85■□□□□ 0.29
SENP3-208ENST00000583277 TRAF5O00463 557 aa16.85■□□□□ 0.29
SENP3-208ENST00000583277 CSPP1Q1MSJ5 1256 aa16.85■□□□□ 0.29
SENP3-208ENST00000583277 CHADLQ6NUI6 762 aa16.85■□□□□ 0.29
SENP3-208ENST00000583277 ZNF396Q96N95 335 aaPredicted RBP16.85■□□□□ 0.29
SENP3-208ENST00000583277 EMILIN3Q9NT22 766 aa16.85■□□□□ 0.29
SENP3-208ENST00000583277 PRR12Q9ULL5 1215 aa16.85■□□□□ 0.29
SENP3-208ENST00000583277 HMGCS2P54868 508 aa16.84■□□□□ 0.29
SENP3-208ENST00000583277 DNM1Q05193 864 aaKnown RBP16.84■□□□□ 0.29
SENP3-208ENST00000583277 QRICH1Q2TAL8 776 aa16.84■□□□□ 0.29
SENP3-208ENST00000583277 FOXD4L6Q3SYB3 417 aaPredicted RBP16.84■□□□□ 0.29
SENP3-208ENST00000583277 SH3D19Q5HYK7 790 aa16.84■□□□□ 0.29
SENP3-208ENST00000583277 LDLRAD1Q5T700 205 aa16.84■□□□□ 0.29
SENP3-208ENST00000583277 FOXD4L3Q6VB84 417 aaPredicted RBP16.84■□□□□ 0.29
SENP3-208ENST00000583277 NOSTRINQ8IVI9 506 aa16.84■□□□□ 0.29
SENP3-208ENST00000583277 DAGLBQ8NCG7 672 aa16.84■□□□□ 0.29
SENP3-208ENST00000583277 SHISA4Q96DD7 197 aa16.84■□□□□ 0.29
SENP3-208ENST00000583277 ZNF408Q9H9D4 720 aa16.84■□□□□ 0.29
SENP3-208ENST00000583277 ELP3Q9H9T3 547 aa16.84■□□□□ 0.29
SENP3-208ENST00000583277 CFAP45Q9UL16 551 aa16.84■□□□□ 0.29
SENP3-208ENST00000583277 BTBD18B2RXH4 712 aa16.83■□□□□ 0.28
SENP3-208ENST00000583277 KIF28PB7ZC32 967 aa16.83■□□□□ 0.28
SENP3-208ENST00000583277 NCLP19338 710 aaKnown RBP16.83■□□□□ 0.28
SENP3-208ENST00000583277 GNA11P29992 359 aa16.83■□□□□ 0.28
SENP3-208ENST00000583277 PPIL2Q13356 520 aa16.83■□□□□ 0.28
SENP3-208ENST00000583277 BICD2Q8TD16 824 aa16.83■□□□□ 0.28
SENP3-208ENST00000583277 SLF1Q9BQI6 1058 aa16.83■□□□□ 0.28
SENP3-208ENST00000583277 TANGO6Q9C0B7 1094 aa16.83■□□□□ 0.28
SENP3-208ENST00000583277 ZMYND12Q9H0C1 365 aa16.83■□□□□ 0.28
SENP3-208ENST00000583277 C6orf50Q9HD87 102 aa16.83■□□□□ 0.28
SENP3-208ENST00000583277 PCDHA4Q9UN74 947 aa16.83■□□□□ 0.28
SENP3-208ENST00000583277 NPY5RQ15761 445 aa16.82■□□□□ 0.28
SENP3-208ENST00000583277 MYSM1Q5VVJ2 828 aa16.82■□□□□ 0.28
SENP3-208ENST00000583277 TYW1BQ6NUM6 668 aa16.82■□□□□ 0.28
SENP3-208ENST00000583277 MOB2Q70IA6 237 aa16.82■□□□□ 0.28
SENP3-208ENST00000583277 PRPF38AQ8NAV1 312 aaKnown RBP16.82■□□□□ 0.28
SENP3-208ENST00000583277 KIFC2Q96AC6 838 aa16.82■□□□□ 0.28
SENP3-208ENST00000583277 CLMNQ96JQ2 1002 aa16.82■□□□□ 0.28
SENP3-208ENST00000583277 AMNQ9BXJ7 453 aa16.82■□□□□ 0.28
SENP3-208ENST00000583277 SCAND2PQ9GZW5 306 aaPredicted RBP16.82■□□□□ 0.28
SENP3-208ENST00000583277 GLT8D2Q9H1C3 349 aa16.82■□□□□ 0.28
SENP3-208ENST00000583277 RANBP17Q9H2T7 1088 aaKnown RBP16.82■□□□□ 0.28
SENP3-208ENST00000583277 RPAP3Q9H6T3 665 aaPredicted RBP16.82■□□□□ 0.28
SENP3-208ENST00000583277 GBA2Q9HCG7 927 aaPredicted RBP16.82■□□□□ 0.28
SENP3-208ENST00000583277 CXCL11O14625 94 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms