RNA–Protein interactions for RNA: ENST00000582797.5

IFT20-212, Transcript of intraflagellar transport 20, humanhuman

TSL 2

Gene IFT20, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-212ENST00000582797 VTI1AQ96AJ9 217 aa18.34■□□□□ 0.53
IFT20-212ENST00000582797 IL23AQ9NPF7 189 aa18.34■□□□□ 0.53
IFT20-212ENST00000582797 ZHX1Q9UKY1 873 aaPredicted RBP18.34■□□□□ 0.53
IFT20-212ENST00000582797 FAM184BQ9ULE4 1060 aa18.34■□□□□ 0.53
IFT20-212ENST00000582797 ADAMTS5Q9UNA0 930 aa18.34■□□□□ 0.53
IFT20-212ENST00000582797 TMX2Q9Y320 296 aa18.34■□□□□ 0.53
IFT20-212ENST00000582797 HCN4Q9Y3Q4 1203 aa18.34■□□□□ 0.53
IFT20-212ENST00000582797 MUC6Q6W4X9 2439 aa18.33■□□□□ 0.53
IFT20-212ENST00000582797 ASGR1P07306 291 aa18.33■□□□□ 0.52
IFT20-212ENST00000582797 C6orf222P0C671 652 aaPredicted RBP18.33■□□□□ 0.52
IFT20-212ENST00000582797 RABGGTBP53611 331 aa18.33■□□□□ 0.52
IFT20-212ENST00000582797 ICA1Q05084 483 aa18.33■□□□□ 0.52
IFT20-212ENST00000582797 POLA2Q14181 598 aa18.33■□□□□ 0.52
IFT20-212ENST00000582797 DYNLL2Q96FJ2 89 aa18.33■□□□□ 0.52
IFT20-212ENST00000582797 ARHGEF10LQ9HCE6 1279 aa18.33■□□□□ 0.52
IFT20-212ENST00000582797 ZNF214Q9UL59 606 aaPredicted RBP18.33■□□□□ 0.52
IFT20-212ENST00000582797 UMODL1Q5DID0 1318 aa18.32■□□□□ 0.52
IFT20-212ENST00000582797 MAGEB6P1A0A0J9YX57 407 aa18.32■□□□□ 0.52
IFT20-212ENST00000582797 ARVCFO00192 962 aa18.32■□□□□ 0.52
IFT20-212ENST00000582797 CT47B1P0C2W7 299 aaPredicted RBP18.32■□□□□ 0.52
IFT20-212ENST00000582797 MYOGP15173 224 aa18.32■□□□□ 0.52
IFT20-212ENST00000582797 STAT3P40763 770 aa18.32■□□□□ 0.52
IFT20-212ENST00000582797 RARSP54136 660 aaKnown RBP18.32■□□□□ 0.52
IFT20-212ENST00000582797 OTOP2Q7RTS6 562 aa18.32■□□□□ 0.52
IFT20-212ENST00000582797 SDR42E1Q8WUS8 393 aa18.32■□□□□ 0.52
IFT20-212ENST00000582797 ARHGAP45Q92619 1136 aa18.32■□□□□ 0.52
IFT20-212ENST00000582797 EAF2Q96CJ1 260 aaPredicted RBP18.32■□□□□ 0.52
IFT20-212ENST00000582797 A0A0U1RQG5 324 aaPredicted RBP18.31■□□□□ 0.52
IFT20-212ENST00000582797 VWA5AO00534 786 aa18.31■□□□□ 0.52
IFT20-212ENST00000582797 DUSP11O75319 330 aaKnown RBP18.31■□□□□ 0.52
IFT20-212ENST00000582797 SURF6O75683 361 aaKnown RBP18.31■□□□□ 0.52
IFT20-212ENST00000582797 CST5P28325 142 aaPredicted RBP18.31■□□□□ 0.52
IFT20-212ENST00000582797 SKIV2LQ15477 1246 aaKnown RBP18.31■□□□□ 0.52
IFT20-212ENST00000582797 PPP2R2DQ66LE6 453 aa18.31■□□□□ 0.52
IFT20-212ENST00000582797 REPS2Q8NFH8 660 aa18.31■□□□□ 0.52
IFT20-212ENST00000582797 SH2D4AQ9H788 454 aa18.31■□□□□ 0.52
IFT20-212ENST00000582797 ARIH1Q9Y4X5 557 aaPredicted RBP18.31■□□□□ 0.52
IFT20-212ENST00000582797 SMIM22K7EJ46 135 aa18.3■□□□□ 0.52
IFT20-212ENST00000582797 TLR3O15455 904 aaKnown RBP18.3■□□□□ 0.52
IFT20-212ENST00000582797 FGBP02675 491 aa18.3■□□□□ 0.52
IFT20-212ENST00000582797 PCSK9Q8NBP7 692 aaKnown RBP18.3■□□□□ 0.52
IFT20-212ENST00000582797 CRNKL1Q9BZJ0 848 aaKnown RBP18.3■□□□□ 0.52
IFT20-212ENST00000582797 SCN5AQ14524 2016 aa18.3■□□□□ 0.52
IFT20-212ENST00000582797 RFXAPO00287 272 aa18.29■□□□□ 0.52
IFT20-212ENST00000582797 ERC2O15083 957 aa18.29■□□□□ 0.52
IFT20-212ENST00000582797 BCAR3O75815 825 aa18.29■□□□□ 0.52
IFT20-212ENST00000582797 CD4P01730 458 aa18.29■□□□□ 0.52
IFT20-212ENST00000582797 TRIM27P14373 513 aa18.29■□□□□ 0.52
IFT20-212ENST00000582797 AAK1Q2M2I8 961 aa18.29■□□□□ 0.52
IFT20-212ENST00000582797 GNASQ5JWF2 1037 aa18.29■□□□□ 0.52
IFT20-212ENST00000582797 SSH3Q8TE77 659 aa18.29■□□□□ 0.52
IFT20-212ENST00000582797 UPF3AQ9H1J1 476 aaKnown RBP18.29■□□□□ 0.52
IFT20-212ENST00000582797 MTIF3Q9H2K0 278 aaKnown RBP18.29■□□□□ 0.52
IFT20-212ENST00000582797 DCP1AQ9NPI6 582 aaPredicted RBP18.29■□□□□ 0.52
IFT20-212ENST00000582797 PPP1R9AQ9ULJ8 1098 aa18.29■□□□□ 0.52
IFT20-212ENST00000582797 COL4A4P53420 1690 aaPredicted RBP18.28■□□□□ 0.52
IFT20-212ENST00000582797 GREB1LQ9C091 1923 aaPredicted RBP18.28■□□□□ 0.52
IFT20-212ENST00000582797 EEF2P13639 858 aaKnown RBP18.28■□□□□ 0.52
IFT20-212ENST00000582797 CCL23P55773 120 aa18.28■□□□□ 0.52
IFT20-212ENST00000582797 GJA9P57773 515 aa18.28■□□□□ 0.52
IFT20-212ENST00000582797 ACVR2BQ13705 512 aa18.28■□□□□ 0.52
IFT20-212ENST00000582797 CCDC144BQ3MJ40 725 aa18.28■□□□□ 0.52
IFT20-212ENST00000582797 TMEM31Q5JXX7 168 aa18.28■□□□□ 0.52
IFT20-212ENST00000582797 FAM83BQ5T0W9 1011 aa18.28■□□□□ 0.52
IFT20-212ENST00000582797 MAMDC4Q6UXC1 1216 aa18.28■□□□□ 0.52
IFT20-212ENST00000582797 LCORLQ8N3X6 602 aa18.28■□□□□ 0.52
IFT20-212ENST00000582797 MSL3Q8N5Y2 521 aaKnown RBP18.28■□□□□ 0.52
IFT20-212ENST00000582797 KHSRPQ92945 711 aaKnown RBP eCLIP18.28■□□□□ 0.52
IFT20-212ENST00000582797 CLUAP1Q96AJ1 413 aa18.28■□□□□ 0.52
IFT20-212ENST00000582797 SWAP70Q9UH65 585 aa18.28■□□□□ 0.52
IFT20-212ENST00000582797 RIPK3Q9Y572 518 aa18.28■□□□□ 0.52
IFT20-212ENST00000582797 DNAJC25-GNG10A0A024R161 153 aa18.27■□□□□ 0.52
IFT20-212ENST00000582797 FAM86C2PA6NEL3 165 aa18.27■□□□□ 0.52
IFT20-212ENST00000582797 CTAGE5O15320 804 aa18.27■□□□□ 0.52
IFT20-212ENST00000582797 RAD21O60216 631 aa18.27■□□□□ 0.52
IFT20-212ENST00000582797 PDE6AP16499 860 aa18.27■□□□□ 0.52
IFT20-212ENST00000582797 COPB2P35606 906 aa18.27■□□□□ 0.52
IFT20-212ENST00000582797 BEX3Q00994 111 aa18.27■□□□□ 0.52
IFT20-212ENST00000582797 SNRNP48Q6IEG0 339 aaKnown RBP18.27■□□□□ 0.52
IFT20-212ENST00000582797 DDX11Q96FC9 970 aa18.27■□□□□ 0.52
IFT20-212ENST00000582797 HIPK3Q9H422 1215 aa18.27■□□□□ 0.52
IFT20-212ENST00000582797 C1orf115Q9H7X2 142 aa18.27■□□□□ 0.52
IFT20-212ENST00000582797 SPC25Q9HBM1 224 aa18.27■□□□□ 0.52
IFT20-212ENST00000582797 C11orf16Q9NQ32 467 aa18.27■□□□□ 0.52
IFT20-212ENST00000582797 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.27■□□□□ 0.52
IFT20-212ENST00000582797 MYH4Q9Y623 1939 aa18.26■□□□□ 0.51
IFT20-212ENST00000582797 CYP2D7A0A087X1C5 515 aa18.26■□□□□ 0.51
IFT20-212ENST00000582797 SLC4A3P48751 1232 aa18.26■□□□□ 0.51
IFT20-212ENST00000582797 ATP8B2P98198 1209 aa18.26■□□□□ 0.51
IFT20-212ENST00000582797 SLC9C2Q5TAH2 1124 aa18.26■□□□□ 0.51
IFT20-212ENST00000582797 KRT40Q6A162 431 aa18.26■□□□□ 0.51
IFT20-212ENST00000582797 FGD4Q96M96 766 aa18.26■□□□□ 0.51
IFT20-212ENST00000582797 NUP88Q99567 741 aaPredicted RBP18.26■□□□□ 0.51
IFT20-212ENST00000582797 WNT8AQ9H1J5 351 aa18.26■□□□□ 0.51
IFT20-212ENST00000582797 CERS4Q9HA82 394 aa18.26■□□□□ 0.51
IFT20-212ENST00000582797 PCDHA11Q9Y5I1 949 aa18.26■□□□□ 0.51
IFT20-212ENST00000582797 MTCH2Q9Y6C9 303 aa18.26■□□□□ 0.51
IFT20-212ENST00000582797 SLC4A7Q9Y6M7 1214 aa18.26■□□□□ 0.51
IFT20-212ENST00000582797 BRWD1Q9NSI6 2320 aa18.26■□□□□ 0.51
IFT20-212ENST00000582797 ZNF532Q9HCE3 1301 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms