RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 REXO1L1PQ8IX06 675 aa12.14□□□□□ -0.47
CDK5RAP3-225ENST00000582482 ZNF579Q8NAF0 562 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP3-225ENST00000582482 CCDC150Q8NCX0 1101 aa12.14□□□□□ -0.47
CDK5RAP3-225ENST00000582482 WDR66Q8TBY9 1149 aa12.14□□□□□ -0.47
CDK5RAP3-225ENST00000582482 ANKRD7Q92527 254 aa12.14□□□□□ -0.47
CDK5RAP3-225ENST00000582482 MRPL44Q9H9J2 332 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP3-225ENST00000582482 BRMS1Q9HCU9 246 aa12.14□□□□□ -0.47
CDK5RAP3-225ENST00000582482 IMPACTQ9P2X3 320 aa12.14□□□□□ -0.47
CDK5RAP3-225ENST00000582482 THSD7AQ9UPZ6 1657 aa12.14□□□□□ -0.47
CDK5RAP3-225ENST00000582482 CALM1P0DP23 149 aa12.13□□□□□ -0.47
CDK5RAP3-225ENST00000582482 CALM2P0DP24 149 aa12.13□□□□□ -0.47
CDK5RAP3-225ENST00000582482 CALM3P0DP25 149 aa12.13□□□□□ -0.47
CDK5RAP3-225ENST00000582482 AKR1B1P15121 316 aa12.13□□□□□ -0.47
CDK5RAP3-225ENST00000582482 GRM4Q14833 912 aa12.13□□□□□ -0.47
CDK5RAP3-225ENST00000582482 NAALADL2Q58DX5 795 aa12.13□□□□□ -0.47
CDK5RAP3-225ENST00000582482 TTBK2Q6IQ55 1244 aa12.13□□□□□ -0.47
CDK5RAP3-225ENST00000582482 SPATA20Q8TB22 786 aa12.13□□□□□ -0.47
CDK5RAP3-225ENST00000582482 DAGLAQ9Y4D2 1042 aa12.13□□□□□ -0.47
CDK5RAP3-225ENST00000582482 LY75O60449 1722 aa12.13□□□□□ -0.47
CDK5RAP3-225ENST00000582482 POLRMTO00411 1230 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-225ENST00000582482 TCP10Q12799 353 aa12.13□□□□□ -0.47
CDK5RAP3-225ENST00000582482 NFIAQ12857 509 aa12.13□□□□□ -0.47
CDK5RAP3-225ENST00000582482 TRIM65Q6PJ69 517 aa12.13□□□□□ -0.47
CDK5RAP3-225ENST00000582482 ZSWIM4Q9H7M6 989 aa12.13□□□□□ -0.47
CDK5RAP3-225ENST00000582482 DBNDD1Q9H9R9 158 aa12.13□□□□□ -0.47
CDK5RAP3-225ENST00000582482 ST7Q9NRC1 585 aa12.13□□□□□ -0.47
CDK5RAP3-225ENST00000582482 PCDHA4Q9UN74 947 aa12.13□□□□□ -0.47
CDK5RAP3-225ENST00000582482 LEMD3Q9Y2U8 911 aa12.13□□□□□ -0.47
CDK5RAP3-225ENST00000582482 CCDC194A0A1B0GVG4 234 aa12.12□□□□□ -0.47
CDK5RAP3-225ENST00000582482 FXR1P51114 621 aaKnown RBP eCLIP12.12□□□□□ -0.47
CDK5RAP3-225ENST00000582482 NAPAP54920 295 aa12.12□□□□□ -0.47
CDK5RAP3-225ENST00000582482 UBE2SQ16763 222 aa12.12□□□□□ -0.47
CDK5RAP3-225ENST00000582482 SPTY2D1Q68D10 685 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP3-225ENST00000582482 DPP8Q6V1X1 898 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP3-225ENST00000582482 MLKLQ8NB16 471 aa12.12□□□□□ -0.47
CDK5RAP3-225ENST00000582482 ENOX1Q8TC92 643 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-225ENST00000582482 QTRT2Q9H974 415 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-225ENST00000582482 LZTFL1Q9NQ48 299 aa12.12□□□□□ -0.47
CDK5RAP3-225ENST00000582482 M0R2N6 131 aa12.12□□□□□ -0.47
CDK5RAP3-225ENST00000582482 NEMFO60524 1076 aa12.12□□□□□ -0.47
CDK5RAP3-225ENST00000582482 CCNT1O60563 726 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-225ENST00000582482 BAG3O95817 575 aa12.12□□□□□ -0.47
CDK5RAP3-225ENST00000582482 PRCPP42785 496 aa12.12□□□□□ -0.47
CDK5RAP3-225ENST00000582482 RCAN1P53805 252 aa12.12□□□□□ -0.47
CDK5RAP3-225ENST00000582482 TBX2Q13207 712 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP3-225ENST00000582482 KMT5BQ4FZB7 885 aa12.12□□□□□ -0.47
CDK5RAP3-225ENST00000582482 RAD9BQ6WBX8 426 aa12.12□□□□□ -0.47
CDK5RAP3-225ENST00000582482 BAG1Q99933 345 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP3-225ENST00000582482 MTA3Q9BTC8 594 aa12.12□□□□□ -0.47
CDK5RAP3-225ENST00000582482 MAST2Q6P0Q8 1798 aa12.12□□□□□ -0.47
CDK5RAP3-225ENST00000582482 MYH8P13535 1937 aa12.11□□□□□ -0.47
CDK5RAP3-225ENST00000582482 PES1O00541 588 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-225ENST00000582482 CASP14P31944 242 aa12.11□□□□□ -0.47
CDK5RAP3-225ENST00000582482 STAT6P42226 847 aa12.11□□□□□ -0.47
CDK5RAP3-225ENST00000582482 TECP42680 631 aa12.11□□□□□ -0.47
CDK5RAP3-225ENST00000582482 KLK7P49862 253 aa12.11□□□□□ -0.47
CDK5RAP3-225ENST00000582482 ST5P78524 1137 aa12.11□□□□□ -0.47
CDK5RAP3-225ENST00000582482 NR1I3Q14994 352 aa12.11□□□□□ -0.47
CDK5RAP3-225ENST00000582482 CRY2Q49AN0 593 aa12.11□□□□□ -0.47
CDK5RAP3-225ENST00000582482 SPECC1LQ69YQ0 1117 aa12.11□□□□□ -0.47
CDK5RAP3-225ENST00000582482 POTEDQ86YR6 584 aa12.11□□□□□ -0.47
CDK5RAP3-225ENST00000582482 KIF18AQ8NI77 898 aa12.11□□□□□ -0.47
CDK5RAP3-225ENST00000582482 NOL10Q9BSC4 688 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-225ENST00000582482 PPP2R2CQ9Y2T4 447 aa12.11□□□□□ -0.47
CDK5RAP3-225ENST00000582482 UBR3Q6ZT12 1888 aa12.11□□□□□ -0.47
CDK5RAP3-225ENST00000582482 PALM3A6NDB9 673 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP3-225ENST00000582482 URI1O94763 535 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP3-225ENST00000582482 KIF5BP33176 963 aa12.11□□□□□ -0.47
CDK5RAP3-225ENST00000582482 FBXO38Q6PIJ6 1188 aa12.11□□□□□ -0.47
CDK5RAP3-225ENST00000582482 IGSF22Q8N9C0 903 aa12.11□□□□□ -0.47
CDK5RAP3-225ENST00000582482 ACRBPQ8NEB7 543 aa12.11□□□□□ -0.47
CDK5RAP3-225ENST00000582482 NELFBQ8WX92 580 aa12.11□□□□□ -0.47
CDK5RAP3-225ENST00000582482 HOOK1Q9UJC3 728 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-225ENST00000582482 GPR75-ASB3A0A0A6YYF3 556 aa12.1□□□□□ -0.47
CDK5RAP3-225ENST00000582482 SMCO2A6NFE2 343 aa12.1□□□□□ -0.47
CDK5RAP3-225ENST00000582482 VASPP50552 380 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-225ENST00000582482 KRT31Q15323 416 aa12.1□□□□□ -0.47
CDK5RAP3-225ENST00000582482 TXNRD1Q16881 649 aa12.1□□□□□ -0.47
CDK5RAP3-225ENST00000582482 KCTD1Q719H9 257 aa12.1□□□□□ -0.47
CDK5RAP3-225ENST00000582482 DGKHQ86XP1 1220 aa12.1□□□□□ -0.47
CDK5RAP3-225ENST00000582482 FERMT2Q96AC1 680 aa12.1□□□□□ -0.47
CDK5RAP3-225ENST00000582482 CCDC94Q9BW85 323 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-225ENST00000582482 PAXBP1Q9Y5B6 917 aa12.1□□□□□ -0.47
CDK5RAP3-225ENST00000582482 MYH1P12882 1939 aa12.1□□□□□ -0.47
CDK5RAP3-225ENST00000582482 MPHOSPH10O00566 681 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP3-225ENST00000582482 PPEF1O14829 653 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-225ENST00000582482 CBFA2T2O43439 604 aa12.1□□□□□ -0.47
CDK5RAP3-225ENST00000582482 SLC37A4O43826 429 aa12.1□□□□□ -0.47
CDK5RAP3-225ENST00000582482 EDIL3O43854 480 aa12.1□□□□□ -0.47
CDK5RAP3-225ENST00000582482 TDP2O95551 362 aa12.1□□□□□ -0.47
CDK5RAP3-225ENST00000582482 RPN1P04843 607 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP3-225ENST00000582482 FCER1AP12319 257 aa12.1□□□□□ -0.47
CDK5RAP3-225ENST00000582482 GLIS3Q8NEA6 775 aa12.1□□□□□ -0.47
CDK5RAP3-225ENST00000582482 RBM17Q96I25 401 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP3-225ENST00000582482 NUDT12Q9BQG2 462 aa12.1□□□□□ -0.47
CDK5RAP3-225ENST00000582482 BARHL2Q9NY43 387 aa12.1□□□□□ -0.47
CDK5RAP3-225ENST00000582482 TRIM10Q9UDY6 481 aa12.1□□□□□ -0.47
CDK5RAP3-225ENST00000582482 TTF2Q9UNY4 1162 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP3-225ENST00000582482 SCAF8Q9UPN6 1271 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP3-225ENST00000582482 ZNF831Q5JPB2 1677 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms