RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 GPKOWQ92917 476 aaPredicted RBP eCLIP25.83■■□□□ 1.736e-6■■□□□ 12
CCDC47-204ENST00000582252 PRMT6Q96LA8 375 aaPredicted RBP25.83■■□□□ 1.73
CCDC47-204ENST00000582252 CCDC17Q96LX7 622 aa25.83■■□□□ 1.73
CCDC47-204ENST00000582252 PYM1Q9BRP8 204 aaKnown RBP25.83■■□□□ 1.73
CCDC47-204ENST00000582252 IDI2Q9BXS1 227 aa25.83■■□□□ 1.73
CCDC47-204ENST00000582252 RNF181Q9P0P0 153 aa25.83■■□□□ 1.73
CCDC47-204ENST00000582252 IGKV6D-41A0A0C4DH26 115 aa25.83■■□□□ 1.72
CCDC47-204ENST00000582252 CCDC194A0A1B0GVG4 234 aa25.83■■□□□ 1.72
CCDC47-204ENST00000582252 CYTH3O43739 400 aa25.83■■□□□ 1.72
CCDC47-204ENST00000582252 GMPSP49915 693 aaPredicted RBP25.83■■□□□ 1.72
CCDC47-204ENST00000582252 ZNF280AP59817 542 aaPredicted RBP25.83■■□□□ 1.72
CCDC47-204ENST00000582252 DPCR1Q3MIW9 517 aa25.83■■□□□ 1.72
CCDC47-204ENST00000582252 WWC2Q6AWC2 1192 aa25.83■■□□□ 1.72
CCDC47-204ENST00000582252 DRC7Q8IY82 874 aa25.83■■□□□ 1.72
CCDC47-204ENST00000582252 TMOD2Q9NZR1 351 aa25.83■■□□□ 1.72
CCDC47-204ENST00000582252 STXBP3O00186 592 aa25.82■■□□□ 1.72
CCDC47-204ENST00000582252 POLR2DO15514 142 aaKnown RBP25.82■■□□□ 1.72
CCDC47-204ENST00000582252 GRIN3BO60391 1043 aa25.82■■□□□ 1.72
CCDC47-204ENST00000582252 TTLL1O95922 423 aa25.82■■□□□ 1.72
CCDC47-204ENST00000582252 ZNF174Q15697 407 aa25.82■■□□□ 1.72
CCDC47-204ENST00000582252 GPC2Q8N158 579 aa25.82■■□□□ 1.72
CCDC47-204ENST00000582252 AKR1B1P15121 316 aa25.81■■□□□ 1.72
CCDC47-204ENST00000582252 GRIN1Q05586 938 aa25.81■■□□□ 1.72
CCDC47-204ENST00000582252 PNOCQ13519 176 aa25.81■■□□□ 1.72
CCDC47-204ENST00000582252 SPECC1Q5M775 1068 aa25.81■■□□□ 1.72
CCDC47-204ENST00000582252 METTL16Q86W50 562 aaKnown RBP25.81■■□□□ 1.72
CCDC47-204ENST00000582252 MRFAP1L1Q96HT8 127 aa25.81■■□□□ 1.72
CCDC47-204ENST00000582252 TDRD3Q9H7E2 651 aaKnown RBP25.81■■□□□ 1.72
CCDC47-204ENST00000582252 MYOZ2Q9NPC6 264 aa25.81■■□□□ 1.72
CCDC47-204ENST00000582252 GREB1LQ9C091 1923 aaPredicted RBP25.81■■□□□ 1.72
CCDC47-204ENST00000582252 BIN1O00499 593 aa25.8■■□□□ 1.72
CCDC47-204ENST00000582252 GOLGA8HP0CJ92 632 aa25.8■■□□□ 1.72
CCDC47-204ENST00000582252 NFIAQ12857 509 aa25.8■■□□□ 1.72
CCDC47-204ENST00000582252 POSTNQ15063 836 aa25.8■■□□□ 1.72
CCDC47-204ENST00000582252 ARL6IP4Q66PJ3 421 aaKnown RBP25.8■■□□□ 1.72
CCDC47-204ENST00000582252 IKBKBO14920 756 aa25.8■■□□□ 1.72
CCDC47-204ENST00000582252 GNA11P29992 359 aa25.8■■□□□ 1.72
CCDC47-204ENST00000582252 PTGDRQ13258 359 aa25.8■■□□□ 1.72
CCDC47-204ENST00000582252 USP17L2Q6R6M4 530 aa25.8■■□□□ 1.72
CCDC47-204ENST00000582252 SPC24Q8NBT2 197 aa25.8■■□□□ 1.72
CCDC47-204ENST00000582252 MYO1BO43795 1136 aa25.79■■□□□ 1.72
CCDC47-204ENST00000582252 PDHBP11177 359 aa25.79■■□□□ 1.72
CCDC47-204ENST00000582252 VEGFAP15692 232 aaPredicted RBP25.79■■□□□ 1.72
CCDC47-204ENST00000582252 SHMT1P34896 483 aa25.79■■□□□ 1.72
CCDC47-204ENST00000582252 NAPAP54920 295 aa25.79■■□□□ 1.72
CCDC47-204ENST00000582252 C9orf131Q5VYM1 1079 aa25.79■■□□□ 1.72
CCDC47-204ENST00000582252 MICALL2Q8IY33 904 aa25.79■■□□□ 1.72
CCDC47-204ENST00000582252 TRIML1Q8N9V2 468 aa25.79■■□□□ 1.72
CCDC47-204ENST00000582252 ZBED3Q96IU2 234 aaPredicted RBP25.79■■□□□ 1.72
CCDC47-204ENST00000582252 C6orf50Q9HD87 102 aa25.79■■□□□ 1.72
CCDC47-204ENST00000582252 SERTAD1Q9UHV2 236 aa25.79■■□□□ 1.72
CCDC47-204ENST00000582252 DACH1Q9UI36 760 aa25.79■■□□□ 1.72
CCDC47-204ENST00000582252 M0R2N6 131 aa25.78■■□□□ 1.72
CCDC47-204ENST00000582252 SLC35G1Q2M3R5 365 aa25.78■■□□□ 1.72
CCDC47-204ENST00000582252 SPDYE2Q495Y8 402 aa25.78■■□□□ 1.72
CCDC47-204ENST00000582252 TRIM34Q9BYJ4 488 aa25.78■■□□□ 1.72
CCDC47-204ENST00000582252 ZMYND12Q9H0C1 365 aa25.78■■□□□ 1.72
CCDC47-204ENST00000582252 RIOX1Q9H6W3 641 aa25.78■■□□□ 1.72
CCDC47-204ENST00000582252 CNOT7Q9UIV1 285 aaKnown RBP25.78■■□□□ 1.72
CCDC47-204ENST00000582252 COL2A1P02458 1487 aaPredicted RBP25.78■■□□□ 1.72
CCDC47-204ENST00000582252 MYH4Q9Y623 1939 aa25.78■■□□□ 1.72
CCDC47-204ENST00000582252 A0A087WWV3 80 aa25.77■■□□□ 1.72
CCDC47-204ENST00000582252 ENTPD3O75355 529 aa25.77■■□□□ 1.72
CCDC47-204ENST00000582252 SNHG28P0DPA3 235 aa25.77■■□□□ 1.72
CCDC47-204ENST00000582252 CACNB3P54284 484 aa25.77■■□□□ 1.72
CCDC47-204ENST00000582252 MDM2Q00987 491 aaPredicted RBP25.77■■□□□ 1.72
CCDC47-204ENST00000582252 KRT25Q7Z3Z0 450 aa25.77■■□□□ 1.72
CCDC47-204ENST00000582252 SMARCE1Q969G3 411 aa25.77■■□□□ 1.72
CCDC47-204ENST00000582252 PI4KBQ9UBF8 816 aa25.77■■□□□ 1.72
CCDC47-204ENST00000582252 CLIP2Q9UDT6 1046 aa25.77■■□□□ 1.72
CCDC47-204ENST00000582252 FAM198AQ9UFP1 575 aa25.77■■□□□ 1.72
CCDC47-204ENST00000582252 PCDHA6Q9UN73 950 aa25.77■■□□□ 1.72
CCDC47-204ENST00000582252 PCDHA8Q9Y5H6 950 aa25.77■■□□□ 1.72
CCDC47-204ENST00000582252 USP17L5A8MUK1 530 aa25.77■■□□□ 1.72
CCDC47-204ENST00000582252 ACTN4O43707 911 aaKnown RBP25.77■■□□□ 1.72
CCDC47-204ENST00000582252 MCM7P33993 719 aa25.77■■□□□ 1.72
CCDC47-204ENST00000582252 NOM1Q5C9Z4 860 aaKnown RBP25.77■■□□□ 1.72
CCDC47-204ENST00000582252 FKBP1CQ5VVH2 108 aa25.77■■□□□ 1.72
CCDC47-204ENST00000582252 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.77■■□□□ 1.72
CCDC47-204ENST00000582252 ZNF70Q9UC06 446 aaPredicted RBP25.77■■□□□ 1.72
CCDC47-204ENST00000582252 PCDHA5Q9Y5H7 936 aa25.77■■□□□ 1.72
CCDC47-204ENST00000582252 ESYT2A0FGR8 921 aa25.76■■□□□ 1.71
CCDC47-204ENST00000582252 WNT10BO00744 389 aa25.76■■□□□ 1.71
CCDC47-204ENST00000582252 SMC2O95347 1197 aa25.76■■□□□ 1.71
CCDC47-204ENST00000582252 NT5DC1Q5TFE4 455 aa25.76■■□□□ 1.71
CCDC47-204ENST00000582252 TYW1BQ6NUM6 668 aa25.76■■□□□ 1.71
CCDC47-204ENST00000582252 SYMPKQ92797 1274 aaKnown RBP25.76■■□□□ 1.71
CCDC47-204ENST00000582252 SIPA1L1O43166 1804 aa25.76■■□□□ 1.71
CCDC47-204ENST00000582252 ZC3H4Q9UPT8 1303 aaKnown RBP25.75■■□□□ 1.71
CCDC47-204ENST00000582252 SHTN1A0MZ66 631 aa25.75■■□□□ 1.71
CCDC47-204ENST00000582252 VWA3AA6NCI4 1184 aa25.75■■□□□ 1.71
CCDC47-204ENST00000582252 H7C1D1 291 aa25.75■■□□□ 1.71
CCDC47-204ENST00000582252 LAD1O00515 517 aa25.75■■□□□ 1.71
CCDC47-204ENST00000582252 MPHOSPH10O00566 681 aaKnown RBP25.75■■□□□ 1.71
CCDC47-204ENST00000582252 LONP1P36776 959 aaKnown RBP25.75■■□□□ 1.71
CCDC47-204ENST00000582252 GPATCH4Q5T3I0 446 aaKnown RBP25.75■■□□□ 1.71
CCDC47-204ENST00000582252 HOMER1Q86YM7 354 aa25.75■■□□□ 1.71
CCDC47-204ENST00000582252 LRRC47Q8N1G4 583 aaKnown RBP25.75■■□□□ 1.71
CCDC47-204ENST00000582252 WNT7AO00755 349 aa25.74■■□□□ 1.71
CCDC47-204ENST00000582252 SLFN14P0C7P3 912 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms