RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 LRRC47Q8N1G4 583 aaKnown RBP26.51■■□□□ 1.83
CASC3-207ENST00000581849 PLXNA1Q9UIW2 1896 aa26.51■■□□□ 1.83
CASC3-207ENST00000581849 DNM1LO00429 736 aa26.5■■□□□ 1.83
CASC3-207ENST00000581849 ZNF792Q3KQV3 632 aa26.5■■□□□ 1.83
CASC3-207ENST00000581849 SLFN13Q68D06 897 aa26.5■■□□□ 1.83
CASC3-207ENST00000581849 SNRNP48Q6IEG0 339 aaKnown RBP26.5■■□□□ 1.83
CASC3-207ENST00000581849 C7orf61Q8IZ16 206 aa26.5■■□□□ 1.83
CASC3-207ENST00000581849 EXOC6Q8TAG9 804 aa26.5■■□□□ 1.83
CASC3-207ENST00000581849 GMCL1Q96IK5 515 aa26.5■■□□□ 1.83
CASC3-207ENST00000581849 SLC38A10Q9HBR0 1119 aa26.5■■□□□ 1.83
CASC3-207ENST00000581849 A0A0D9SFI3 127 aa26.49■■□□□ 1.83
CASC3-207ENST00000581849 TSPY2A6NKD2 308 aa26.49■■□□□ 1.83
CASC3-207ENST00000581849 BMP3P12645 472 aa26.49■■□□□ 1.83
CASC3-207ENST00000581849 MSL3Q8N5Y2 521 aaKnown RBP26.49■■□□□ 1.83
CASC3-207ENST00000581849 ARRDC4Q8NCT1 418 aa26.49■■□□□ 1.83
CASC3-207ENST00000581849 FAM227BQ96M60 508 aa26.49■■□□□ 1.83
CASC3-207ENST00000581849 CTDP1Q9Y5B0 961 aaPredicted RBP26.49■■□□□ 1.83
CASC3-207ENST00000581849 TRIM6-TRIM34B2RNG4 842 aa26.48■■□□□ 1.83
CASC3-207ENST00000581849 PLA2G6O60733 806 aa26.48■■□□□ 1.83
CASC3-207ENST00000581849 IGHDP01880 384 aa26.48■■□□□ 1.83
CASC3-207ENST00000581849 NOVP48745 357 aa26.48■■□□□ 1.83
CASC3-207ENST00000581849 CTDSPL2Q05D32 466 aa26.48■■□□□ 1.83
CASC3-207ENST00000581849 B4GALNT3Q6L9W6 998 aa26.48■■□□□ 1.83
CASC3-207ENST00000581849 PLEKHM2Q8IWE5 1019 aa26.48■■□□□ 1.83
CASC3-207ENST00000581849 TINF2Q9BSI4 451 aa26.48■■□□□ 1.83
CASC3-207ENST00000581849 CCDC171Q6TFL3 1326 aa26.47■■□□□ 1.83
CASC3-207ENST00000581849 FGAP02671 866 aa26.47■■□□□ 1.83
CASC3-207ENST00000581849 MFAP1P55081 439 aaKnown RBP26.47■■□□□ 1.83
CASC3-207ENST00000581849 FAM160B2Q86V87 743 aa26.47■■□□□ 1.83
CASC3-207ENST00000581849 KIFC2Q96AC6 838 aa26.47■■□□□ 1.83
CASC3-207ENST00000581849 FBXO40Q9UH90 709 aa26.47■■□□□ 1.83
CASC3-207ENST00000581849 RANBP2P49792 3224 aaKnown RBP26.47■■□□□ 1.83
CASC3-207ENST00000581849 PGK2P07205 417 aa26.46■■□□□ 1.83
CASC3-207ENST00000581849 HSPD1P10809 573 aaKnown RBP26.46■■□□□ 1.83
CASC3-207ENST00000581849 PCP11498 1178 aaKnown RBP26.46■■□□□ 1.83
CASC3-207ENST00000581849 BMP8BP34820 402 aa26.46■■□□□ 1.83
CASC3-207ENST00000581849 STAT2P52630 851 aa26.46■■□□□ 1.83
CASC3-207ENST00000581849 NMIQ13287 307 aaPredicted RBP26.46■■□□□ 1.83
CASC3-207ENST00000581849 CHURC1Q8WUH1 139 aa26.46■■□□□ 1.83
CASC3-207ENST00000581849 GDF15Q99988 308 aa26.46■■□□□ 1.83
CASC3-207ENST00000581849 IL17RBQ9NRM6 502 aa26.46■■□□□ 1.83
CASC3-207ENST00000581849 STX8Q9UNK0 236 aa26.46■■□□□ 1.83
CASC3-207ENST00000581849 RIPK3Q9Y572 518 aa26.46■■□□□ 1.83
CASC3-207ENST00000581849 DNAJC25-GNG10A0A024R161 153 aa26.45■■□□□ 1.82
CASC3-207ENST00000581849 SLC1A4P43007 532 aa26.45■■□□□ 1.82
CASC3-207ENST00000581849 CHST13Q8NET6 341 aa26.45■■□□□ 1.82
CASC3-207ENST00000581849 RILPL2Q969X0 211 aa26.45■■□□□ 1.82
CASC3-207ENST00000581849 RANBP6O60518 1105 aaKnown RBP26.44■■□□□ 1.82
CASC3-207ENST00000581849 LRRC26Q2I0M4 334 aa26.44■■□□□ 1.82
CASC3-207ENST00000581849 ZNF467Q7Z7K2 595 aaPredicted RBP26.44■■□□□ 1.82
CASC3-207ENST00000581849 ZNF589Q86UQ0 364 aaPredicted RBP26.44■■□□□ 1.82
CASC3-207ENST00000581849 CPXCR1Q8N123 301 aa26.44■■□□□ 1.82
CASC3-207ENST00000581849 STAG1Q8WVM7 1258 aa26.44■■□□□ 1.82
CASC3-207ENST00000581849 SYNGAP1Q96PV0 1343 aa26.43■■□□□ 1.82
CASC3-207ENST00000581849 TMEM232C9JQI7 657 aa26.43■■□□□ 1.82
CASC3-207ENST00000581849 SDSP20132 328 aa26.43■■□□□ 1.82
CASC3-207ENST00000581849 NT5C2P49902 561 aa26.43■■□□□ 1.82
CASC3-207ENST00000581849 MAMDC4Q6UXC1 1216 aa26.43■■□□□ 1.82
CASC3-207ENST00000581849 DDX11Q96FC9 970 aa26.43■■□□□ 1.82
CASC3-207ENST00000581849 SENP6Q9GZR1 1112 aaPredicted RBP26.43■■□□□ 1.82
CASC3-207ENST00000581849 RAVER2Q9HCJ3 691 aaKnown RBP26.43■■□□□ 1.82
CASC3-207ENST00000581849 TCP11L1Q9NUJ3 509 aa26.43■■□□□ 1.82
CASC3-207ENST00000581849 ZMYND8Q9ULU4 1186 aaPredicted RBP26.43■■□□□ 1.82
CASC3-207ENST00000581849 TACC3Q9Y6A5 838 aa26.43■■□□□ 1.82
CASC3-207ENST00000581849 KBTBD13C9JR72 458 aa26.42■■□□□ 1.82
CASC3-207ENST00000581849 HIP1O00291 1037 aa26.42■■□□□ 1.82
CASC3-207ENST00000581849 PRAMEF19Q5SWL8 479 aa26.42■■□□□ 1.82
CASC3-207ENST00000581849 RCSD1Q6JBY9 416 aa26.42■■□□□ 1.82
CASC3-207ENST00000581849 INCENPQ9NQS7 918 aa26.42■■□□□ 1.82
CASC3-207ENST00000581849 MCCP23508 829 aa26.41■■□□□ 1.82
CASC3-207ENST00000581849 CNPY2Q9Y2B0 182 aa26.41■■□□□ 1.82
CASC3-207ENST00000581849 SMCHD1A6NHR9 2005 aa26.4■■□□□ 1.82
CASC3-207ENST00000581849 NMT2O60551 498 aa26.4■■□□□ 1.82
CASC3-207ENST00000581849 RARBP10826 455 aa26.4■■□□□ 1.82
CASC3-207ENST00000581849 TKFCQ3LXA3 575 aa26.4■■□□□ 1.82
CASC3-207ENST00000581849 DCAF4Q8WV16 495 aa26.4■■□□□ 1.82
CASC3-207ENST00000581849 ZNF865P0CJ78 1059 aaPredicted RBP26.39■■□□□ 1.82
CASC3-207ENST00000581849 AKR1A1P14550 325 aa26.39■■□□□ 1.82
CASC3-207ENST00000581849 GJC2Q5T442 439 aaPredicted RBP26.39■■□□□ 1.82
CASC3-207ENST00000581849 RNF41Q9H4P4 317 aaPredicted RBP26.39■■□□□ 1.82
CASC3-207ENST00000581849 TOMM22Q9NS69 142 aa26.39■■□□□ 1.82
CASC3-207ENST00000581849 ISY1Q9ULR0 285 aaKnown RBP26.39■■□□□ 1.82
CASC3-207ENST00000581849 SUPT16HQ9Y5B9 1047 aaKnown RBP26.39■■□□□ 1.82
CASC3-207ENST00000581849 TOP1P11387 765 aaKnown RBP26.38■■□□□ 1.81
CASC3-207ENST00000581849 SYN1P17600 705 aa26.38■■□□□ 1.81
CASC3-207ENST00000581849 IKQ13123 557 aaPredicted RBP26.38■■□□□ 1.81
CASC3-207ENST00000581849 LRRC41Q15345 812 aa26.38■■□□□ 1.81
CASC3-207ENST00000581849 AKNAD1Q5T1N1 836 aa26.38■■□□□ 1.81
CASC3-207ENST00000581849 ANO1Q5XXA6 986 aa26.38■■□□□ 1.81
CASC3-207ENST00000581849 ANKRD35Q8N283 1001 aa26.38■■□□□ 1.81
CASC3-207ENST00000581849 TTC14Q96N46 770 aa26.38■■□□□ 1.81
CASC3-207ENST00000581849 ACAD9Q9H845 621 aa26.38■■□□□ 1.81
CASC3-207ENST00000581849 DIAPH3Q9NSV4 1193 aa26.38■■□□□ 1.81
CASC3-207ENST00000581849 ZNF536O15090 1300 aa26.38■■□□□ 1.81
CASC3-207ENST00000581849 LAMA4Q16363 1823 aa26.37■■□□□ 1.81
CASC3-207ENST00000581849 MAGEA10P43363 369 aaPredicted RBP26.37■■□□□ 1.81
CASC3-207ENST00000581849 SNX17Q15036 470 aa26.37■■□□□ 1.81
CASC3-207ENST00000581849 MFSD6Q6ZSS7 791 aa26.37■■□□□ 1.81
CASC3-207ENST00000581849 XPNPEP3Q9NQH7 507 aa26.37■■□□□ 1.81
CASC3-207ENST00000581849 SLC4A3P48751 1232 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms