RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 CTDP1Q9Y5B0 961 aaPredicted RBP23.04■■□□□ 1.28
SREBF1-220ENST00000581707 COBLO75128 1261 aa23.03■■□□□ 1.28
SREBF1-220ENST00000581707 MCCP23508 829 aa23.03■■□□□ 1.28
SREBF1-220ENST00000581707 SLC1A4P43007 532 aa23.03■■□□□ 1.28
SREBF1-220ENST00000581707 CHMP4CQ96CF2 233 aa23.03■■□□□ 1.28
SREBF1-220ENST00000581707 MMP19Q99542 508 aa23.03■■□□□ 1.28
SREBF1-220ENST00000581707 TEX13BQ9BXU2 312 aa23.03■■□□□ 1.28
SREBF1-220ENST00000581707 TCP11L1Q9NUJ3 509 aa23.03■■□□□ 1.28
SREBF1-220ENST00000581707 TMEM232C9JQI7 657 aa23.02■■□□□ 1.28
SREBF1-220ENST00000581707 ATP2A1O14983 1001 aa23.02■■□□□ 1.28
SREBF1-220ENST00000581707 CCND3P30281 292 aaPredicted RBP23.02■■□□□ 1.28
SREBF1-220ENST00000581707 SNRNP48Q6IEG0 339 aaKnown RBP23.02■■□□□ 1.28
SREBF1-220ENST00000581707 CPXCR1Q8N123 301 aa23.02■■□□□ 1.28
SREBF1-220ENST00000581707 CHURC1Q8WUH1 139 aa23.02■■□□□ 1.28
SREBF1-220ENST00000581707 SLC38A10Q9HBR0 1119 aa23.02■■□□□ 1.28
SREBF1-220ENST00000581707 CTNNA3Q9UI47 895 aa23.02■■□□□ 1.28
SREBF1-220ENST00000581707 CYP2C19P33261 490 aa23.01■■□□□ 1.27
SREBF1-220ENST00000581707 STAT2P52630 851 aa23.01■■□□□ 1.27
SREBF1-220ENST00000581707 IKQ13123 557 aaPredicted RBP23.01■■□□□ 1.27
SREBF1-220ENST00000581707 KCTD2Q14681 263 aa23.01■■□□□ 1.27
SREBF1-220ENST00000581707 OLFML2BQ68BL8 750 aa23.01■■□□□ 1.27
SREBF1-220ENST00000581707 RCSD1Q6JBY9 416 aa23.01■■□□□ 1.27
SREBF1-220ENST00000581707 FAM160B2Q86V87 743 aa23.01■■□□□ 1.27
SREBF1-220ENST00000581707 IL25Q9H293 177 aa23.01■■□□□ 1.27
SREBF1-220ENST00000581707 MTMR7Q9Y216 660 aa23.01■■□□□ 1.27
SREBF1-220ENST00000581707 LAMA4Q16363 1823 aa23.01■■□□□ 1.27
SREBF1-220ENST00000581707 IGHA2P01877 340 aa23■■□□□ 1.27
SREBF1-220ENST00000581707 FDX1P10109 184 aa23■■□□□ 1.27
SREBF1-220ENST00000581707 TOP1P11387 765 aaKnown RBP23■■□□□ 1.27
SREBF1-220ENST00000581707 CHMLP26374 656 aa23■■□□□ 1.27
SREBF1-220ENST00000581707 SLC4A3P48751 1232 aa23■■□□□ 1.27
SREBF1-220ENST00000581707 ANKLE1Q8NAG6 615 aa23■■□□□ 1.27
SREBF1-220ENST00000581707 RUFY2Q8WXA3 655 aa23■■□□□ 1.27
SREBF1-220ENST00000581707 ESR2Q92731 530 aa23■■□□□ 1.27
SREBF1-220ENST00000581707 HTATIP2Q9BUP3 242 aa23■■□□□ 1.27
SREBF1-220ENST00000581707 RAVER2Q9HCJ3 691 aaKnown RBP23■■□□□ 1.27
SREBF1-220ENST00000581707 CEP290O15078 2479 aa22.99■■□□□ 1.27
SREBF1-220ENST00000581707 PLA2G6O60733 806 aa22.99■■□□□ 1.27
SREBF1-220ENST00000581707 IMMTQ16891 758 aaKnown RBP22.99■■□□□ 1.27
SREBF1-220ENST00000581707 KCTD1Q719H9 257 aa22.99■■□□□ 1.27
SREBF1-220ENST00000581707 DPF3Q92784 378 aa22.99■■□□□ 1.27
SREBF1-220ENST00000581707 PAWRQ96IZ0 340 aaKnown RBP22.99■■□□□ 1.27
SREBF1-220ENST00000581707 TTC14Q96N46 770 aa22.99■■□□□ 1.27
SREBF1-220ENST00000581707 TMEM47Q9BQJ4 181 aa22.99■■□□□ 1.27
SREBF1-220ENST00000581707 OGDHLQ9ULD0 1010 aa22.99■■□□□ 1.27
SREBF1-220ENST00000581707 RIPK3Q9Y572 518 aa22.99■■□□□ 1.27
SREBF1-220ENST00000581707 NEDD4P46934 1319 aa22.99■■□□□ 1.27
SREBF1-220ENST00000581707 PGK2P07205 417 aa22.98■■□□□ 1.27
SREBF1-220ENST00000581707 CNGA1P29973 690 aa22.98■■□□□ 1.27
SREBF1-220ENST00000581707 OAZ1P54368 228 aa22.98■■□□□ 1.27
SREBF1-220ENST00000581707 LHX8Q68G74 356 aa22.98■■□□□ 1.27
SREBF1-220ENST00000581707 DCAF4Q8WV16 495 aa22.98■■□□□ 1.27
SREBF1-220ENST00000581707 MAML3Q96JK9 1138 aa22.98■■□□□ 1.27
SREBF1-220ENST00000581707 RAD50Q92878 1312 aa22.98■■□□□ 1.27
SREBF1-220ENST00000581707 NT5C2P49902 561 aa22.97■■□□□ 1.27
SREBF1-220ENST00000581707 CCDC96Q2M329 555 aa22.97■■□□□ 1.27
SREBF1-220ENST00000581707 RASGRP2Q7LDG7 609 aa22.97■■□□□ 1.27
SREBF1-220ENST00000581707 NECAB2Q7Z6G3 386 aa22.97■■□□□ 1.27
SREBF1-220ENST00000581707 DIS3LQ8TF46 1054 aaKnown RBP22.97■■□□□ 1.27
SREBF1-220ENST00000581707 PLXNA1Q9UIW2 1896 aa22.96■■□□□ 1.27
SREBF1-220ENST00000581707 CENPQQ7L2Z9 268 aaPredicted RBP22.96■■□□□ 1.27
SREBF1-220ENST00000581707 TRPV1Q8NER1 839 aa22.96■■□□□ 1.27
SREBF1-220ENST00000581707 DIS3Q9Y2L1 958 aaKnown RBP22.96■■□□□ 1.27
SREBF1-220ENST00000581707 KDM4AO75164 1064 aa22.95■■□□□ 1.26
SREBF1-220ENST00000581707 CYBAP13498 195 aa22.95■■□□□ 1.26
SREBF1-220ENST00000581707 ZNF792Q3KQV3 632 aa22.95■■□□□ 1.26
SREBF1-220ENST00000581707 CHST13Q8NET6 341 aa22.95■■□□□ 1.26
SREBF1-220ENST00000581707 DDX11Q96FC9 970 aa22.95■■□□□ 1.26
SREBF1-220ENST00000581707 ZKSCAN3Q9BRR0 538 aa22.95■■□□□ 1.26
SREBF1-220ENST00000581707 FBXO40Q9UH90 709 aa22.95■■□□□ 1.26
SREBF1-220ENST00000581707 DDX20Q9UHI6 824 aaKnown RBP22.95■■□□□ 1.26
SREBF1-220ENST00000581707 PRR12Q9ULL5 1215 aa22.95■■□□□ 1.26
SREBF1-220ENST00000581707 B4E1Z4 1266 aa22.94■■□□□ 1.26
SREBF1-220ENST00000581707 MSCO60682 206 aa22.94■■□□□ 1.26
SREBF1-220ENST00000581707 MNX1P50219 401 aaPredicted RBP22.94■■□□□ 1.26
SREBF1-220ENST00000581707 CCDC178Q5BJE1 867 aa22.94■■□□□ 1.26
SREBF1-220ENST00000581707 IQCA1Q86XH1 822 aa22.94■■□□□ 1.26
SREBF1-220ENST00000581707 PRAMEF19Q5SWL8 479 aa22.93■■□□□ 1.26
SREBF1-220ENST00000581707 TTBK2Q6IQ55 1244 aa22.93■■□□□ 1.26
SREBF1-220ENST00000581707 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.93■■□□□ 1.26
SREBF1-220ENST00000581707 DGKHQ86XP1 1220 aa22.93■■□□□ 1.26
SREBF1-220ENST00000581707 AGBL1Q96MI9 1066 aa22.93■■□□□ 1.26
SREBF1-220ENST00000581707 TINF2Q9BSI4 451 aa22.93■■□□□ 1.26
SREBF1-220ENST00000581707 KRT23Q9C075 422 aa22.93■■□□□ 1.26
SREBF1-220ENST00000581707 CNNM2Q9H8M5 875 aa22.93■■□□□ 1.26
SREBF1-220ENST00000581707 ZSWIM5Q9P217 1185 aa22.93■■□□□ 1.26
SREBF1-220ENST00000581707 ZNF536O15090 1300 aa22.92■■□□□ 1.26
SREBF1-220ENST00000581707 FRMPD2Q68DX3 1309 aaPredicted RBP22.92■■□□□ 1.26
SREBF1-220ENST00000581707 DNAJC25-GNG10A0A024R161 153 aa22.92■■□□□ 1.26
SREBF1-220ENST00000581707 H0YGN5 161 aa22.92■■□□□ 1.26
SREBF1-220ENST00000581707 SGSM2O43147 1006 aa22.92■■□□□ 1.26
SREBF1-220ENST00000581707 PDHBP11177 359 aa22.92■■□□□ 1.26
SREBF1-220ENST00000581707 SNAP25P60880 206 aa22.92■■□□□ 1.26
SREBF1-220ENST00000581707 PTH1RQ03431 593 aa22.92■■□□□ 1.26
SREBF1-220ENST00000581707 CCDC174Q6PII3 467 aa22.92■■□□□ 1.26
SREBF1-220ENST00000581707 BTNL9Q6UXG8 535 aa22.92■■□□□ 1.26
SREBF1-220ENST00000581707 ANKRD35Q8N283 1001 aa22.92■■□□□ 1.26
SREBF1-220ENST00000581707 C11orf49Q9H6J7 331 aa22.92■■□□□ 1.26
SREBF1-220ENST00000581707 GPCPD1Q9NPB8 672 aa22.92■■□□□ 1.26
SREBF1-220ENST00000581707 HOMER2Q9NSB8 354 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms