RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.84■■□□□ 1.57
CCDC42-203ENST00000581598 ARRDC4Q8NCT1 418 aa24.84■■□□□ 1.57
CCDC42-203ENST00000581598 ZMYND8Q9ULU4 1186 aaPredicted RBP24.84■■□□□ 1.57
CCDC42-203ENST00000581598 LRRC26Q2I0M4 334 aa24.83■■□□□ 1.57
CCDC42-203ENST00000581598 FAM47AQ5JRC9 791 aa24.83■■□□□ 1.57
CCDC42-203ENST00000581598 SLC38A10Q9HBR0 1119 aa24.83■■□□□ 1.57
CCDC42-203ENST00000581598 SMCHD1A6NHR9 2005 aa24.83■■□□□ 1.56
CCDC42-203ENST00000581598 ZBED4O75132 1171 aa24.82■■□□□ 1.56
CCDC42-203ENST00000581598 PGK2P07205 417 aa24.82■■□□□ 1.56
CCDC42-203ENST00000581598 FDX1P10109 184 aa24.82■■□□□ 1.56
CCDC42-203ENST00000581598 OAZ1P54368 228 aa24.82■■□□□ 1.56
CCDC42-203ENST00000581598 VPS53Q5VIR6 699 aa24.82■■□□□ 1.56
CCDC42-203ENST00000581598 SLFN13Q68D06 897 aa24.82■■□□□ 1.56
CCDC42-203ENST00000581598 SNRNP48Q6IEG0 339 aaKnown RBP24.82■■□□□ 1.56
CCDC42-203ENST00000581598 LRRC47Q8N1G4 583 aaKnown RBP24.82■■□□□ 1.56
CCDC42-203ENST00000581598 MSL3Q8N5Y2 521 aaKnown RBP24.82■■□□□ 1.56
CCDC42-203ENST00000581598 TINF2Q9BSI4 451 aa24.82■■□□□ 1.56
CCDC42-203ENST00000581598 LNPKQ9C0E8 428 aa24.82■■□□□ 1.56
CCDC42-203ENST00000581598 FGRP09769 529 aa24.81■■□□□ 1.56
CCDC42-203ENST00000581598 BMP3P12645 472 aa24.81■■□□□ 1.56
CCDC42-203ENST00000581598 MCMDC2Q4G0Z9 681 aa24.81■■□□□ 1.56
CCDC42-203ENST00000581598 GMCL1Q96IK5 515 aa24.81■■□□□ 1.56
CCDC42-203ENST00000581598 SENP6Q9GZR1 1112 aaPredicted RBP24.81■■□□□ 1.56
CCDC42-203ENST00000581598 ORC4O43929 436 aa24.8■■□□□ 1.56
CCDC42-203ENST00000581598 NOVP48745 357 aa24.8■■□□□ 1.56
CCDC42-203ENST00000581598 PRAMEF19Q5SWL8 479 aa24.8■■□□□ 1.56
CCDC42-203ENST00000581598 KIFC2Q96AC6 838 aa24.8■■□□□ 1.56
CCDC42-203ENST00000581598 RIPK3Q9Y572 518 aa24.8■■□□□ 1.56
CCDC42-203ENST00000581598 GTF3C3Q9Y5Q9 886 aa24.8■■□□□ 1.56
CCDC42-203ENST00000581598 ZMYM6O95789 1325 aa24.8■■□□□ 1.56
CCDC42-203ENST00000581598 DNAJC25-GNG10A0A024R161 153 aa24.79■■□□□ 1.56
CCDC42-203ENST00000581598 A0A0D9SFI3 127 aa24.79■■□□□ 1.56
CCDC42-203ENST00000581598 TSPY2A6NKD2 308 aa24.79■■□□□ 1.56
CCDC42-203ENST00000581598 PLA2G6O60733 806 aa24.79■■□□□ 1.56
CCDC42-203ENST00000581598 SYN1P17600 705 aa24.79■■□□□ 1.56
CCDC42-203ENST00000581598 CTDSPL2Q05D32 466 aa24.79■■□□□ 1.56
CCDC42-203ENST00000581598 FAM227BQ96M60 508 aa24.79■■□□□ 1.56
CCDC42-203ENST00000581598 OSBPL3Q9H4L5 887 aa24.79■■□□□ 1.56
CCDC42-203ENST00000581598 FBXO40Q9UH90 709 aa24.79■■□□□ 1.56
CCDC42-203ENST00000581598 CTDP1Q9Y5B0 961 aaPredicted RBP24.79■■□□□ 1.56
CCDC42-203ENST00000581598 KBTBD13C9JR72 458 aa24.78■■□□□ 1.56
CCDC42-203ENST00000581598 GJC2Q5T442 439 aaPredicted RBP24.78■■□□□ 1.56
CCDC42-203ENST00000581598 FAM160B2Q86V87 743 aa24.78■■□□□ 1.56
CCDC42-203ENST00000581598 CPXCR1Q8N123 301 aa24.78■■□□□ 1.56
CCDC42-203ENST00000581598 CHST13Q8NET6 341 aa24.78■■□□□ 1.56
CCDC42-203ENST00000581598 IL17RBQ9NRM6 502 aa24.78■■□□□ 1.56
CCDC42-203ENST00000581598 MAGEA10P43363 369 aaPredicted RBP24.77■■□□□ 1.56
CCDC42-203ENST00000581598 STAT2P52630 851 aa24.77■■□□□ 1.56
CCDC42-203ENST00000581598 MAMDC4Q6UXC1 1216 aa24.77■■□□□ 1.56
CCDC42-203ENST00000581598 ZNF467Q7Z7K2 595 aaPredicted RBP24.77■■□□□ 1.56
CCDC42-203ENST00000581598 CHD1LQ86WJ1 897 aa24.77■■□□□ 1.56
CCDC42-203ENST00000581598 CHURC1Q8WUH1 139 aa24.77■■□□□ 1.56
CCDC42-203ENST00000581598 STAG1Q8WVM7 1258 aa24.77■■□□□ 1.56
CCDC42-203ENST00000581598 DDX11Q96FC9 970 aa24.77■■□□□ 1.56
CCDC42-203ENST00000581598 RAVER2Q9HCJ3 691 aaKnown RBP24.77■■□□□ 1.56
CCDC42-203ENST00000581598 TACC3Q9Y6A5 838 aa24.77■■□□□ 1.56
CCDC42-203ENST00000581598 SYNGAP1Q96PV0 1343 aa24.77■■□□□ 1.56
CCDC42-203ENST00000581598 TMEM232C9JQI7 657 aa24.76■■□□□ 1.55
CCDC42-203ENST00000581598 FGAP02671 866 aa24.76■■□□□ 1.55
CCDC42-203ENST00000581598 ZNF865P0CJ78 1059 aaPredicted RBP24.76■■□□□ 1.55
CCDC42-203ENST00000581598 HSPD1P10809 573 aaKnown RBP24.76■■□□□ 1.55
CCDC42-203ENST00000581598 SLC1A4P43007 532 aa24.76■■□□□ 1.55
CCDC42-203ENST00000581598 NUCB1Q02818 461 aa24.76■■□□□ 1.55
CCDC42-203ENST00000581598 LRRC41Q15345 812 aa24.76■■□□□ 1.55
CCDC42-203ENST00000581598 ANO1Q5XXA6 986 aa24.76■■□□□ 1.55
CCDC42-203ENST00000581598 INCENPQ9NQS7 918 aa24.76■■□□□ 1.55
CCDC42-203ENST00000581598 STX8Q9UNK0 236 aa24.76■■□□□ 1.55
CCDC42-203ENST00000581598 LAMA3Q16787 3333 aa24.76■■□□□ 1.55
CCDC42-203ENST00000581598 TRIM6-TRIM34B2RNG4 842 aa24.75■■□□□ 1.55
CCDC42-203ENST00000581598 RANBP6O60518 1105 aaKnown RBP24.75■■□□□ 1.55
CCDC42-203ENST00000581598 IGHDP01880 384 aa24.75■■□□□ 1.55
CCDC42-203ENST00000581598 RARBP10826 455 aa24.75■■□□□ 1.55
CCDC42-203ENST00000581598 NMIQ13287 307 aaPredicted RBP24.75■■□□□ 1.55
CCDC42-203ENST00000581598 SNX17Q15036 470 aa24.75■■□□□ 1.55
CCDC42-203ENST00000581598 PLEKHM2Q8IWE5 1019 aa24.75■■□□□ 1.55
CCDC42-203ENST00000581598 PPP4R2Q9NY27 417 aa24.75■■□□□ 1.55
CCDC42-203ENST00000581598 CNPY2Q9Y2B0 182 aa24.75■■□□□ 1.55
CCDC42-203ENST00000581598 AKR1A1P14550 325 aa24.74■■□□□ 1.55
CCDC42-203ENST00000581598 RCSD1Q6JBY9 416 aa24.74■■□□□ 1.55
CCDC42-203ENST00000581598 B4GALNT3Q6L9W6 998 aa24.74■■□□□ 1.55
CCDC42-203ENST00000581598 ZNF589Q86UQ0 364 aaPredicted RBP24.74■■□□□ 1.55
CCDC42-203ENST00000581598 XPNPEP3Q9NQH7 507 aa24.74■■□□□ 1.55
CCDC42-203ENST00000581598 CCDC171Q6TFL3 1326 aa24.74■■□□□ 1.55
CCDC42-203ENST00000581598 NMT2O60551 498 aa24.73■■□□□ 1.55
CCDC42-203ENST00000581598 PCP11498 1178 aaKnown RBP24.73■■□□□ 1.55
CCDC42-203ENST00000581598 TAL1P17542 331 aaPredicted RBP24.73■■□□□ 1.55
CCDC42-203ENST00000581598 MCCP23508 829 aa24.73■■□□□ 1.55
CCDC42-203ENST00000581598 ATN1P54259 1190 aaPredicted RBP24.73■■□□□ 1.55
CCDC42-203ENST00000581598 RTP1P59025 263 aa24.73■■□□□ 1.55
CCDC42-203ENST00000581598 C1orf53Q5VUE5 145 aa24.73■■□□□ 1.55
CCDC42-203ENST00000581598 SLC39A5Q6ZMH5 540 aa24.73■■□□□ 1.55
CCDC42-203ENST00000581598 RILPL2Q969X0 211 aa24.73■■□□□ 1.55
CCDC42-203ENST00000581598 TCP11L1Q9NUJ3 509 aa24.73■■□□□ 1.55
CCDC42-203ENST00000581598 ZNF536O15090 1300 aa24.72■■□□□ 1.55
CCDC42-203ENST00000581598 SNAI1O95863 264 aaPredicted RBP24.72■■□□□ 1.55
CCDC42-203ENST00000581598 SDSP20132 328 aa24.72■■□□□ 1.55
CCDC42-203ENST00000581598 MFAP1P55081 439 aaKnown RBP24.72■■□□□ 1.55
CCDC42-203ENST00000581598 TKFCQ3LXA3 575 aa24.72■■□□□ 1.55
CCDC42-203ENST00000581598 TDHQ8IZJ6 230 aa24.72■■□□□ 1.55
CCDC42-203ENST00000581598 ANKRD35Q8N283 1001 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms