RNA–Protein interactions for RNA: ENST00000581477.1

DDX42-213, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-213ENST00000581477 USP2O75604 605 aaPredicted RBP8.29□□□□□ -1.08
DDX42-213ENST00000581477 GDF11O95390 407 aa8.29□□□□□ -1.08
DDX42-213ENST00000581477 SNHG28P0DPA3 235 aa8.29□□□□□ -1.08
DDX42-213ENST00000581477 EEF2P13639 858 aaKnown RBP8.29□□□□□ -1.08
DDX42-213ENST00000581477 DDIT3P35638 169 aa8.29□□□□□ -1.08
DDX42-213ENST00000581477 SEPT2Q15019 361 aa8.29□□□□□ -1.08
DDX42-213ENST00000581477 NTRK3Q16288 839 aa8.29□□□□□ -1.08
DDX42-213ENST00000581477 SHROOM1Q2M3G4 852 aaPredicted RBP8.29□□□□□ -1.08
DDX42-213ENST00000581477 NOL9Q5SY16 702 aaKnown RBP8.29□□□□□ -1.08
DDX42-213ENST00000581477 NECAB1Q8N987 351 aa8.29□□□□□ -1.08
DDX42-213ENST00000581477 PNMA1Q8ND90 353 aa8.29□□□□□ -1.08
DDX42-213ENST00000581477 CDCA5Q96FF9 252 aa8.29□□□□□ -1.08
DDX42-213ENST00000581477 KAT14Q9H8E8 782 aa8.29□□□□□ -1.08
DDX42-213ENST00000581477 CWC22Q9HCG8 908 aaKnown RBP8.29□□□□□ -1.08
DDX42-213ENST00000581477 CLIP2Q9UDT6 1046 aa8.29□□□□□ -1.08
DDX42-213ENST00000581477 DAXXQ9UER7 740 aaPredicted RBP8.29□□□□□ -1.08
DDX42-213ENST00000581477 ZBTB21Q9ULJ3 1066 aa8.29□□□□□ -1.08
DDX42-213ENST00000581477 STX8Q9UNK0 236 aa8.29□□□□□ -1.08
DDX42-213ENST00000581477 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.29□□□□□ -1.08
DDX42-213ENST00000581477 PAPPA2Q9BXP8 1791 aa8.29□□□□□ -1.08
DDX42-213ENST00000581477 MYH4Q9Y623 1939 aa8.29□□□□□ -1.08
DDX42-213ENST00000581477 ATAD5Q96QE3 1844 aa8.29□□□□□ -1.08
DDX42-213ENST00000581477 DOCK1Q14185 1865 aa8.28□□□□□ -1.08
DDX42-213ENST00000581477 UNCXA6NJT0 531 aa8.28□□□□□ -1.08
DDX42-213ENST00000581477 PPP1R12BO60237 982 aaPredicted RBP8.28□□□□□ -1.08
DDX42-213ENST00000581477 CTDNEP1O95476 244 aa8.28□□□□□ -1.08
DDX42-213ENST00000581477 IFNAR1P17181 557 aa8.28□□□□□ -1.08
DDX42-213ENST00000581477 CDC27P30260 824 aa8.28□□□□□ -1.08
DDX42-213ENST00000581477 INPP5BP32019 993 aa8.28□□□□□ -1.08
DDX42-213ENST00000581477 NF2P35240 595 aa8.28□□□□□ -1.08
DDX42-213ENST00000581477 ADD1P35611 737 aaKnown RBP8.28□□□□□ -1.08
DDX42-213ENST00000581477 SLC19A1P41440 591 aa8.28□□□□□ -1.08
DDX42-213ENST00000581477 METAP2P50579 478 aaKnown RBP eCLIP8.28□□□□□ -1.08
DDX42-213ENST00000581477 CCT2P78371 535 aaKnown RBP8.28□□□□□ -1.08
DDX42-213ENST00000581477 ICA1Q05084 483 aa8.28□□□□□ -1.08
DDX42-213ENST00000581477 STK3Q13188 491 aa8.28□□□□□ -1.08
DDX42-213ENST00000581477 GRM4Q14833 912 aa8.28□□□□□ -1.08
DDX42-213ENST00000581477 TSR1Q2NL82 804 aaKnown RBP8.28□□□□□ -1.08
DDX42-213ENST00000581477 DLK2Q6UY11 383 aa8.28□□□□□ -1.08
DDX42-213ENST00000581477 CCDC83Q8IWF9 413 aa8.28□□□□□ -1.08
DDX42-213ENST00000581477 SCYL3Q8IZE3 742 aa8.28□□□□□ -1.08
DDX42-213ENST00000581477 NSUN7Q8NE18 718 aaKnown RBP8.28□□□□□ -1.08
DDX42-213ENST00000581477 GMCL1P1Q8NEA9 526 aa8.28□□□□□ -1.08
DDX42-213ENST00000581477 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.28□□□□□ -1.08
DDX42-213ENST00000581477 SMARCC2Q8TAQ2 1214 aa8.28□□□□□ -1.08
DDX42-213ENST00000581477 KCNV2Q8TDN2 545 aa8.28□□□□□ -1.08
DDX42-213ENST00000581477 MYL10Q9BUA6 226 aa8.28□□□□□ -1.08
DDX42-213ENST00000581477 GLIS2Q9BZE0 524 aaPredicted RBP8.28□□□□□ -1.08
DDX42-213ENST00000581477 RBM28Q9NW13 759 aaKnown RBP8.28□□□□□ -1.08
DDX42-213ENST00000581477 TMX2Q9Y320 296 aa8.28□□□□□ -1.08
DDX42-213ENST00000581477 A0A1W2PRG0 241 aa8.27□□□□□ -1.09
DDX42-213ENST00000581477 PALM3A6NDB9 673 aaPredicted RBP8.27□□□□□ -1.09
DDX42-213ENST00000581477 GOLGA8AA7E2F4 631 aa8.27□□□□□ -1.09
DDX42-213ENST00000581477 USP17L5A8MUK1 530 aa8.27□□□□□ -1.09
DDX42-213ENST00000581477 HSP90AA1P07900 732 aaKnown RBP8.27□□□□□ -1.09
DDX42-213ENST00000581477 PDIA4P13667 645 aaKnown RBP8.27□□□□□ -1.09
DDX42-213ENST00000581477 PTPRAP18433 802 aa8.27□□□□□ -1.09
DDX42-213ENST00000581477 SMARCA1P28370 1054 aa8.27□□□□□ -1.09
DDX42-213ENST00000581477 KIF5BP33176 963 aa8.27□□□□□ -1.09
DDX42-213ENST00000581477 GNAQP50148 359 aa8.27□□□□□ -1.09
DDX42-213ENST00000581477 FUT2Q10981 343 aa8.27□□□□□ -1.09
DDX42-213ENST00000581477 RAB3GAP1Q15042 981 aa8.27□□□□□ -1.09
DDX42-213ENST00000581477 RTN1Q16799 776 aa8.27□□□□□ -1.09
DDX42-213ENST00000581477 MAP1SQ66K74 1059 aaPredicted RBP8.27□□□□□ -1.09
DDX42-213ENST00000581477 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.27□□□□□ -1.09
DDX42-213ENST00000581477 MICU3Q86XE3 530 aa8.27□□□□□ -1.09
DDX42-213ENST00000581477 CLEC10AQ8IUN9 316 aa8.27□□□□□ -1.09
DDX42-213ENST00000581477 RGS22Q8NE09 1264 aa8.27□□□□□ -1.09
DDX42-213ENST00000581477 CTCFLQ8NI51 663 aaPredicted RBP8.27□□□□□ -1.09
DDX42-213ENST00000581477 ZNF516Q92618 1163 aa8.27□□□□□ -1.09
DDX42-213ENST00000581477 WRNIP1Q96S55 665 aa8.27□□□□□ -1.09
DDX42-213ENST00000581477 WDR18Q9BV38 432 aa8.27□□□□□ -1.09
DDX42-213ENST00000581477 NCOA5Q9HCD5 579 aaKnown RBP8.27□□□□□ -1.09
DDX42-213ENST00000581477 ARHGEF10LQ9HCE6 1279 aa8.27□□□□□ -1.09
DDX42-213ENST00000581477 MAD2L2Q9UI95 211 aa8.27□□□□□ -1.09
DDX42-213ENST00000581477 NAP1L2Q9ULW6 460 aaPredicted RBP8.27□□□□□ -1.09
DDX42-213ENST00000581477 GOLGB1Q14789 3259 aaKnown RBP8.27□□□□□ -1.09
DDX42-213ENST00000581477 PHIPQ8WWQ0 1821 aa8.26□□□□□ -1.09
DDX42-213ENST00000581477 F5H6K3 240 aa8.26□□□□□ -1.09
DDX42-213ENST00000581477 CPLX1O14810 134 aa8.26□□□□□ -1.09
DDX42-213ENST00000581477 CDKL5O76039 1030 aa8.26□□□□□ -1.09
DDX42-213ENST00000581477 PDHBP11177 359 aa8.26□□□□□ -1.09
DDX42-213ENST00000581477 FDPSP14324 419 aaKnown RBP8.26□□□□□ -1.09
DDX42-213ENST00000581477 RXRAP19793 462 aa8.26□□□□□ -1.09
DDX42-213ENST00000581477 IREB2P48200 963 aaKnown RBP8.26□□□□□ -1.09
DDX42-213ENST00000581477 FKBP1BP68106 108 aa8.26□□□□□ -1.09
DDX42-213ENST00000581477 HMGN5P82970 282 aaKnown RBP8.26□□□□□ -1.09
DDX42-213ENST00000581477 KLRC3Q07444 240 aa8.26□□□□□ -1.09
DDX42-213ENST00000581477 ASPRV1Q53RT3 343 aa8.26□□□□□ -1.09
DDX42-213ENST00000581477 GPATCH4Q5T3I0 446 aaKnown RBP8.26□□□□□ -1.09
DDX42-213ENST00000581477 LDLRAD1Q5T700 205 aa8.26□□□□□ -1.09
DDX42-213ENST00000581477 CPLX2Q6PUV4 134 aaKnown RBP8.26□□□□□ -1.09
DDX42-213ENST00000581477 TMTC3Q6ZXV5 915 aa8.26□□□□□ -1.09
DDX42-213ENST00000581477 NBPF11Q86T75 865 aa8.26□□□□□ -1.09
DDX42-213ENST00000581477 RAB11FIP4Q86YS3 637 aa8.26□□□□□ -1.09
DDX42-213ENST00000581477 ANKRD13AQ8IZ07 590 aa8.26□□□□□ -1.09
DDX42-213ENST00000581477 NUP133Q8WUM0 1156 aa8.26□□□□□ -1.09
DDX42-213ENST00000581477 ZKSCAN4Q969J2 545 aaPredicted RBP8.26□□□□□ -1.09
DDX42-213ENST00000581477 GMCL1Q96IK5 515 aa8.26□□□□□ -1.09
DDX42-213ENST00000581477 LZTS2Q9BRK4 669 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms