RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 PRPF38BQ5VTL8 546 aaKnown RBP19.28■□□□□ 0.68
IFT20-210ENST00000580357 RNF20Q5VTR2 975 aa19.28■□□□□ 0.68
IFT20-210ENST00000580357 SH3TC2Q8TF17 1288 aa19.28■□□□□ 0.68
IFT20-210ENST00000580357 USP6NLQ92738 828 aa19.28■□□□□ 0.68
IFT20-210ENST00000580357 KAT14Q9H8E8 782 aa19.28■□□□□ 0.68
IFT20-210ENST00000580357 ERICH2A1L162 156 aa19.27■□□□□ 0.68
IFT20-210ENST00000580357 E7EWF7 191 aa19.27■□□□□ 0.68
IFT20-210ENST00000580357 SART3Q15020 963 aaKnown RBP19.27■□□□□ 0.68
IFT20-210ENST00000580357 NECTIN1Q15223 517 aa19.27■□□□□ 0.68
IFT20-210ENST00000580357 NCAPG2Q86XI2 1143 aa19.27■□□□□ 0.68
IFT20-210ENST00000580357 ZKSCAN3Q9BRR0 538 aa19.27■□□□□ 0.68
IFT20-210ENST00000580357 TEX13BQ9BXU2 312 aa19.27■□□□□ 0.68
IFT20-210ENST00000580357 SLC38A10Q9HBR0 1119 aa19.27■□□□□ 0.68
IFT20-210ENST00000580357 FCER1AP12319 257 aa19.26■□□□□ 0.67
IFT20-210ENST00000580357 CYP2B6P20813 491 aa19.26■□□□□ 0.67
IFT20-210ENST00000580357 GRB14Q14449 540 aa19.26■□□□□ 0.67
IFT20-210ENST00000580357 GPATCH4Q5T3I0 446 aaKnown RBP19.26■□□□□ 0.67
IFT20-210ENST00000580357 BTNL9Q6UXG8 535 aa19.26■□□□□ 0.67
IFT20-210ENST00000580357 REPS2Q8NFH8 660 aa19.26■□□□□ 0.67
IFT20-210ENST00000580357 MTA3Q9BTC8 594 aa19.26■□□□□ 0.67
IFT20-210ENST00000580357 PNMA2Q9UL42 364 aa19.26■□□□□ 0.67
IFT20-210ENST00000580357 ZNF214Q9UL59 606 aaPredicted RBP19.26■□□□□ 0.67
IFT20-210ENST00000580357 RLFQ13129 1914 aa19.25■□□□□ 0.67
IFT20-210ENST00000580357 HMGCRP04035 888 aa19.25■□□□□ 0.67
IFT20-210ENST00000580357 HOXC6P09630 235 aa19.25■□□□□ 0.67
IFT20-210ENST00000580357 CCDC96Q2M329 555 aa19.25■□□□□ 0.67
IFT20-210ENST00000580357 IFIT1BQ5T764 474 aaKnown RBP19.25■□□□□ 0.67
IFT20-210ENST00000580357 KCTD1Q719H9 257 aa19.25■□□□□ 0.67
IFT20-210ENST00000580357 DPP9Q86TI2 863 aa19.25■□□□□ 0.67
IFT20-210ENST00000580357 ENAHQ8N8S7 591 aaPredicted RBP19.25■□□□□ 0.67
IFT20-210ENST00000580357 PNMA1Q8ND90 353 aa19.25■□□□□ 0.67
IFT20-210ENST00000580357 NKX2-3Q8TAU0 364 aa19.25■□□□□ 0.67
IFT20-210ENST00000580357 APBA2Q99767 749 aa19.25■□□□□ 0.67
IFT20-210ENST00000580357 FBXO40Q9UH90 709 aa19.25■□□□□ 0.67
IFT20-210ENST00000580357 LAMA4Q16363 1823 aa19.25■□□□□ 0.67
IFT20-210ENST00000580357 TNKSO95271 1327 aa19.25■□□□□ 0.67
IFT20-210ENST00000580357 DOCK3Q8IZD9 2030 aa19.24■□□□□ 0.67
IFT20-210ENST00000580357 ZSWIM8A7E2V4 1837 aa19.24■□□□□ 0.67
IFT20-210ENST00000580357 SNHG28P0DPA3 235 aa19.24■□□□□ 0.67
IFT20-210ENST00000580357 PDHBP11177 359 aa19.24■□□□□ 0.67
IFT20-210ENST00000580357 ELNP15502 786 aa19.24■□□□□ 0.67
IFT20-210ENST00000580357 TKFCQ3LXA3 575 aa19.24■□□□□ 0.67
IFT20-210ENST00000580357 CREB3L3Q68CJ9 461 aa19.24■□□□□ 0.67
IFT20-210ENST00000580357 TMTC2Q8N394 836 aa19.24■□□□□ 0.67
IFT20-210ENST00000580357 MTMR7Q9Y216 660 aa19.24■□□□□ 0.67
IFT20-210ENST00000580357 IFIT3O14879 490 aaKnown RBP19.23■□□□□ 0.67
IFT20-210ENST00000580357 SLC27A2O14975 620 aa19.23■□□□□ 0.67
IFT20-210ENST00000580357 REC8O95072 547 aa19.23■□□□□ 0.67
IFT20-210ENST00000580357 ZKSCAN1P17029 563 aaPredicted RBP19.23■□□□□ 0.67
IFT20-210ENST00000580357 ZNF543Q08ER8 600 aa19.23■□□□□ 0.67
IFT20-210ENST00000580357 KCTD2Q14681 263 aa19.23■□□□□ 0.67
IFT20-210ENST00000580357 SNRNP48Q6IEG0 339 aaKnown RBP19.23■□□□□ 0.67
IFT20-210ENST00000580357 CYB5R4Q7L1T6 521 aa19.23■□□□□ 0.67
IFT20-210ENST00000580357 CPXCR1Q8N123 301 aa19.23■□□□□ 0.67
IFT20-210ENST00000580357 CHST13Q8NET6 341 aa19.23■□□□□ 0.67
IFT20-210ENST00000580357 PRR12Q9ULL5 1215 aa19.23■□□□□ 0.67
IFT20-210ENST00000580357 EPB41L2O43491 1005 aaKnown RBP19.22■□□□□ 0.67
IFT20-210ENST00000580357 INHAP05111 366 aa19.22■□□□□ 0.67
IFT20-210ENST00000580357 CCL5P13501 91 aa19.22■□□□□ 0.67
IFT20-210ENST00000580357 ADORA2AP29274 412 aa19.22■□□□□ 0.67
IFT20-210ENST00000580357 SEC23AQ15436 765 aa19.22■□□□□ 0.67
IFT20-210ENST00000580357 TSGA10IPQ3SY00 556 aa19.22■□□□□ 0.67
IFT20-210ENST00000580357 MFSD14CQ5VZR4 134 aa19.22■□□□□ 0.67
IFT20-210ENST00000580357 MMP19Q99542 508 aa19.22■□□□□ 0.67
IFT20-210ENST00000580357 RNF208Q9H0X6 261 aa19.22■□□□□ 0.67
IFT20-210ENST00000580357 RAVER2Q9HCJ3 691 aaKnown RBP19.22■□□□□ 0.67
IFT20-210ENST00000580357 DIS3Q9Y2L1 958 aaKnown RBP19.22■□□□□ 0.67
IFT20-210ENST00000580357 GJB1P08034 283 aa19.21■□□□□ 0.67
IFT20-210ENST00000580357 MCM5P33992 734 aa19.21■□□□□ 0.67
IFT20-210ENST00000580357 KRT32Q14532 448 aa19.21■□□□□ 0.67
IFT20-210ENST00000580357 WTAPQ15007 396 aa19.21■□□□□ 0.67
IFT20-210ENST00000580357 ASPRV1Q53RT3 343 aa19.21■□□□□ 0.67
IFT20-210ENST00000580357 SYDE2Q5VT97 1194 aa19.21■□□□□ 0.67
IFT20-210ENST00000580357 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.21■□□□□ 0.67
IFT20-210ENST00000580357 CHMP4CQ96CF2 233 aa19.21■□□□□ 0.67
IFT20-210ENST00000580357 HMX1Q9NP08 348 aaPredicted RBP19.21■□□□□ 0.67
IFT20-210ENST00000580357 GPCPD1Q9NPB8 672 aa19.21■□□□□ 0.67
IFT20-210ENST00000580357 RPTORQ8N122 1335 aa19.21■□□□□ 0.67
IFT20-210ENST00000580357 EIF5BO60841 1220 aaKnown RBP19.2■□□□□ 0.66
IFT20-210ENST00000580357 MTFR1Q15390 333 aa19.2■□□□□ 0.66
IFT20-210ENST00000580357 OLFML2BQ68BL8 750 aa19.2■□□□□ 0.66
IFT20-210ENST00000580357 TTBK2Q6IQ55 1244 aa19.2■□□□□ 0.66
IFT20-210ENST00000580357 TRIB2Q92519 343 aa19.2■□□□□ 0.66
IFT20-210ENST00000580357 DDX11Q96FC9 970 aa19.2■□□□□ 0.66
IFT20-210ENST00000580357 TMEM87BQ96K49 555 aa19.2■□□□□ 0.66
IFT20-210ENST00000580357 A0A0G2JMZ2 1700 aa19.2■□□□□ 0.66
IFT20-210ENST00000580357 PARP14Q460N5 1801 aa19.19■□□□□ 0.66
IFT20-210ENST00000580357 PARP1P09874 1014 aaKnown RBP19.19■□□□□ 0.66
IFT20-210ENST00000580357 SLC16A2P36021 539 aa19.19■□□□□ 0.66
IFT20-210ENST00000580357 SLC4A3P48751 1232 aa19.19■□□□□ 0.66
IFT20-210ENST00000580357 STOX1Q6ZVD7 989 aa19.19■□□□□ 0.66
IFT20-210ENST00000580357 MB21D2Q8IYB1 491 aaPredicted RBP19.19■□□□□ 0.66
IFT20-210ENST00000580357 IGDCC4Q8TDY8 1250 aa19.19■□□□□ 0.66
IFT20-210ENST00000580357 RANBP17Q9H2T7 1088 aaKnown RBP19.19■□□□□ 0.66
IFT20-210ENST00000580357 FRMPD2Q68DX3 1309 aaPredicted RBP19.19■□□□□ 0.66
IFT20-210ENST00000580357 COBLO75128 1261 aa19.18■□□□□ 0.66
IFT20-210ENST00000580357 MYCP01106 439 aaPredicted RBP19.18■□□□□ 0.66
IFT20-210ENST00000580357 ICAM1P05362 532 aa19.18■□□□□ 0.66
IFT20-210ENST00000580357 HMGB1P09429 215 aaKnown RBP19.18■□□□□ 0.66
IFT20-210ENST00000580357 GJA8P48165 433 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms