RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 CLSTN2Q9H4D0 955 aa6.22□□□□□ -1.41
CDH8-206ENST00000580044 PHAXQ9H814 394 aaKnown RBP6.22□□□□□ -1.41
CDH8-206ENST00000580044 SPG7Q9UQ90 795 aa6.22□□□□□ -1.41
CDH8-206ENST00000580044 RBM8AQ9Y5S9 174 aaKnown RBP6.22□□□□□ -1.41
CDH8-206ENST00000580044 BTBD11A6QL63 1104 aa6.21□□□□□ -1.42
CDH8-206ENST00000580044 KIF2AO00139 706 aaPredicted RBP6.21□□□□□ -1.42
CDH8-206ENST00000580044 SLC27A2O14975 620 aa6.21□□□□□ -1.42
CDH8-206ENST00000580044 MAP4K4O95819 1239 aaPredicted RBP6.21□□□□□ -1.42
CDH8-206ENST00000580044 IGLV1-40P01703 118 aa6.21□□□□□ -1.42
CDH8-206ENST00000580044 RPLP1P05386 114 aaKnown RBP6.21□□□□□ -1.42
CDH8-206ENST00000580044 RPS6KB1P23443 525 aa6.21□□□□□ -1.42
CDH8-206ENST00000580044 GRNP28799 593 aaKnown RBP6.21□□□□□ -1.42
CDH8-206ENST00000580044 CDC27P30260 824 aa6.21□□□□□ -1.42
CDH8-206ENST00000580044 CD68P34810 354 aaPredicted RBP6.21□□□□□ -1.42
CDH8-206ENST00000580044 DMTNQ08495 405 aa6.21□□□□□ -1.42
CDH8-206ENST00000580044 NEXNQ0ZGT2 675 aa6.21□□□□□ -1.42
CDH8-206ENST00000580044 ME3Q16798 604 aa6.21□□□□□ -1.42
CDH8-206ENST00000580044 CYB5RLQ6IPT4 315 aa6.21□□□□□ -1.42
CDH8-206ENST00000580044 INTS5Q6P9B9 1019 aaKnown RBP6.21□□□□□ -1.42
CDH8-206ENST00000580044 GIMAP6Q6P9H5 292 aa6.21□□□□□ -1.42
CDH8-206ENST00000580044 AACSQ86V21 672 aa6.21□□□□□ -1.42
CDH8-206ENST00000580044 NCAPG2Q86XI2 1143 aa6.21□□□□□ -1.42
CDH8-206ENST00000580044 KLHL23Q8NBE8 558 aa6.21□□□□□ -1.42
CDH8-206ENST00000580044 TDRD7Q8NHU6 1098 aaKnown RBP6.21□□□□□ -1.42
CDH8-206ENST00000580044 GIMAP7Q8NHV1 300 aa6.21□□□□□ -1.42
CDH8-206ENST00000580044 ANKRD7Q92527 254 aa6.21□□□□□ -1.42
CDH8-206ENST00000580044 FSD1Q9BTV5 496 aa6.21□□□□□ -1.42
CDH8-206ENST00000580044 TTC12Q9H892 705 aaPredicted RBP6.21□□□□□ -1.42
CDH8-206ENST00000580044 LRFN2Q9ULH4 789 aa6.21□□□□□ -1.42
CDH8-206ENST00000580044 TPCN1Q9ULQ1 816 aa6.21□□□□□ -1.42
CDH8-206ENST00000580044 NPHP4O75161 1426 aaPredicted RBP6.21□□□□□ -1.42
CDH8-206ENST00000580044 DDX60Q8IY21 1712 aaKnown RBP6.21□□□□□ -1.42
CDH8-206ENST00000580044 TRPM3Q9HCF6 1732 aaPredicted RBP6.21□□□□□ -1.42
CDH8-206ENST00000580044 GOLGA6L19H0YKK7 550 aa6.2□□□□□ -1.42
CDH8-206ENST00000580044 LINC01387J3KSC0 135 aa6.2□□□□□ -1.42
CDH8-206ENST00000580044 GRM8O00222 908 aa6.2□□□□□ -1.42
CDH8-206ENST00000580044 PRMT3O60678 531 aa6.2□□□□□ -1.42
CDH8-206ENST00000580044 KIF20AO95235 890 aa6.2□□□□□ -1.42
CDH8-206ENST00000580044 LARGE1O95461 756 aa6.2□□□□□ -1.42
CDH8-206ENST00000580044 TUBB4AP04350 444 aa6.2□□□□□ -1.42
CDH8-206ENST00000580044 HOXD8P13378 290 aaPredicted RBP6.2□□□□□ -1.42
CDH8-206ENST00000580044 EIF2S2P20042 333 aaKnown RBP6.2□□□□□ -1.42
CDH8-206ENST00000580044 PTH1RQ03431 593 aa6.2□□□□□ -1.42
CDH8-206ENST00000580044 NMIQ13287 307 aaPredicted RBP6.2□□□□□ -1.42
CDH8-206ENST00000580044 SETDB1Q15047 1291 aa6.2□□□□□ -1.42
CDH8-206ENST00000580044 STX1AQ16623 288 aa6.2□□□□□ -1.42
CDH8-206ENST00000580044 DUOXA2Q1HG44 320 aa6.2□□□□□ -1.42
CDH8-206ENST00000580044 ADCK5Q3MIX3 580 aa6.2□□□□□ -1.42
CDH8-206ENST00000580044 USPL1Q5W0Q7 1092 aa6.2□□□□□ -1.42
CDH8-206ENST00000580044 ZNF530Q6P9A1 599 aaPredicted RBP6.2□□□□□ -1.42
CDH8-206ENST00000580044 SARM1Q6SZW1 724 aa6.2□□□□□ -1.42
CDH8-206ENST00000580044 ACAD11Q709F0 780 aa6.2□□□□□ -1.42
CDH8-206ENST00000580044 TTC6Q86TZ1 520 aa6.2□□□□□ -1.42
CDH8-206ENST00000580044 PLA2G4DQ86XP0 818 aa6.2□□□□□ -1.42
CDH8-206ENST00000580044 DRC7Q8IY82 874 aa6.2□□□□□ -1.42
CDH8-206ENST00000580044 RGS22Q8NE09 1264 aa6.2□□□□□ -1.42
CDH8-206ENST00000580044 UTP4Q969X6 686 aaKnown RBP6.2□□□□□ -1.42
CDH8-206ENST00000580044 COL26A1Q96A83 441 aa6.2□□□□□ -1.42
CDH8-206ENST00000580044 MRFAP1L1Q96HT8 127 aa6.2□□□□□ -1.42
CDH8-206ENST00000580044 NAT10Q9H0A0 1025 aaKnown RBP6.2□□□□□ -1.42
CDH8-206ENST00000580044 CGNQ9P2M7 1197 aaKnown RBP6.2□□□□□ -1.42
CDH8-206ENST00000580044 TRIM33Q9UPN9 1127 aa6.2□□□□□ -1.42
CDH8-206ENST00000580044 MAP3K2Q9Y2U5 619 aa6.2□□□□□ -1.42
CDH8-206ENST00000580044 KCNMB2Q9Y691 235 aa6.2□□□□□ -1.42
CDH8-206ENST00000580044 MRVI1Q9Y6F6 885 aa6.2□□□□□ -1.42
CDH8-206ENST00000580044 PKD1L3Q7Z443 1732 aa6.19□□□□□ -1.42
CDH8-206ENST00000580044 H3BQV1 296 aa6.19□□□□□ -1.42
CDH8-206ENST00000580044 NRDCO43847 1150 aa6.19□□□□□ -1.42
CDH8-206ENST00000580044 PTPRAP18433 802 aa6.19□□□□□ -1.42
CDH8-206ENST00000580044 ATP5JP18859 108 aa6.19□□□□□ -1.42
CDH8-206ENST00000580044 ARL4DP49703 201 aa6.19□□□□□ -1.42
CDH8-206ENST00000580044 ZNF165P49910 485 aa6.19□□□□□ -1.42
CDH8-206ENST00000580044 ZNF75DP51815 510 aa6.19□□□□□ -1.42
CDH8-206ENST00000580044 GSDMDP57764 484 aa6.19□□□□□ -1.42
CDH8-206ENST00000580044 FAM193AP78312 1265 aa6.19□□□□□ -1.42
CDH8-206ENST00000580044 ANO6Q4KMQ2 910 aa6.19□□□□□ -1.42
CDH8-206ENST00000580044 TAF3Q5VWG9 929 aa6.19□□□□□ -1.42
CDH8-206ENST00000580044 NAA16Q6N069 864 aaPredicted RBP6.19□□□□□ -1.42
CDH8-206ENST00000580044 CDC37L1Q7L3B6 337 aa6.19□□□□□ -1.42
CDH8-206ENST00000580044 CREBRFQ8IUR6 639 aa6.19□□□□□ -1.42
CDH8-206ENST00000580044 OR13H1Q8NG92 308 aa6.19□□□□□ -1.42
CDH8-206ENST00000580044 BICD2Q8TD16 824 aa6.19□□□□□ -1.42
CDH8-206ENST00000580044 LEO1Q8WVC0 666 aaPredicted RBP6.19□□□□□ -1.42
CDH8-206ENST00000580044 GTF3C6Q969F1 213 aa6.19□□□□□ -1.42
CDH8-206ENST00000580044 ZNF396Q96N95 335 aaPredicted RBP6.19□□□□□ -1.42
CDH8-206ENST00000580044 ZNF830Q96NB3 372 aaPredicted RBP6.19□□□□□ -1.42
CDH8-206ENST00000580044 SLC26A8Q96RN1 970 aa6.19□□□□□ -1.42
CDH8-206ENST00000580044 TRIM5Q9C035 493 aa6.19□□□□□ -1.42
CDH8-206ENST00000580044 LACRTQ9GZZ8 138 aa6.19□□□□□ -1.42
CDH8-206ENST00000580044 KCNF1Q9H3M0 494 aa6.19□□□□□ -1.42
CDH8-206ENST00000580044 DDX21Q9NR30 783 aaKnown RBP eCLIP6.19□□□□□ -1.42
CDH8-206ENST00000580044 DACT1Q9NYF0 836 aa6.19□□□□□ -1.42
CDH8-206ENST00000580044 SH3TC1Q8TE82 1336 aa6.19□□□□□ -1.42
CDH8-206ENST00000580044 NUP188Q5SRE5 1749 aa6.19□□□□□ -1.42
CDH8-206ENST00000580044 MYH7P12883 1935 aa6.19□□□□□ -1.42
CDH8-206ENST00000580044 PALLDQ8WX93 1383 aa6.18□□□□□ -1.42
CDH8-206ENST00000580044 MST1RQ04912 1400 aa6.18□□□□□ -1.42
CDH8-206ENST00000580044 RNMTO43148 476 aaKnown RBP6.18□□□□□ -1.42
CDH8-206ENST00000580044 CCP110O43303 1012 aa6.18□□□□□ -1.42
CDH8-206ENST00000580044 ST3GAL1Q11201 340 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms