RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 TOMM20Q15388 145 aa7.7□□□□□ -1.18
COPS3-216ENST00000579716 DNTTIP2Q5QJE6 756 aaKnown RBP7.7□□□□□ -1.18
COPS3-216ENST00000579716 TSHZ3Q63HK5 1081 aa7.7□□□□□ -1.18
COPS3-216ENST00000579716 ZNF765Q7L2R6 523 aa7.7□□□□□ -1.18
COPS3-216ENST00000579716 SPRED2Q7Z698 418 aa7.7□□□□□ -1.18
COPS3-216ENST00000579716 MCF2L2Q86YR7 1114 aa7.7□□□□□ -1.18
COPS3-216ENST00000579716 GIMAP7Q8NHV1 300 aa7.7□□□□□ -1.18
COPS3-216ENST00000579716 SKA1Q96BD8 255 aa7.7□□□□□ -1.18
COPS3-216ENST00000579716 CENPTQ96BT3 561 aa7.7□□□□□ -1.18
COPS3-216ENST00000579716 MAP3K14Q99558 947 aa7.7□□□□□ -1.18
COPS3-216ENST00000579716 METTL22Q9BUU2 404 aaPredicted RBP7.7□□□□□ -1.18
COPS3-216ENST00000579716 SEMA6CQ9H3T2 930 aa7.7□□□□□ -1.18
COPS3-216ENST00000579716 GSX1Q9H4S2 264 aaPredicted RBP7.7□□□□□ -1.18
COPS3-216ENST00000579716 KMT5AQ9NQR1 393 aa7.7□□□□□ -1.18
COPS3-216ENST00000579716 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.7□□□□□ -1.18
COPS3-216ENST00000579716 TPPPO94811 219 aa7.69□□□□□ -1.18
COPS3-216ENST00000579716 RAPGEF3O95398 923 aa7.69□□□□□ -1.18
COPS3-216ENST00000579716 PDE1CQ14123 709 aaPredicted RBP7.69□□□□□ -1.18
COPS3-216ENST00000579716 SPECC1Q5M775 1068 aa7.69□□□□□ -1.18
COPS3-216ENST00000579716 ARMC3Q5W041 872 aa7.69□□□□□ -1.18
COPS3-216ENST00000579716 C16orf87Q6PH81 154 aa7.69□□□□□ -1.18
COPS3-216ENST00000579716 KSR2Q6VAB6 950 aa7.69□□□□□ -1.18
COPS3-216ENST00000579716 C11orf74Q86VG3 221 aa7.69□□□□□ -1.18
COPS3-216ENST00000579716 IQCF2Q8IXL9 164 aa7.69□□□□□ -1.18
COPS3-216ENST00000579716 MYO1HQ8N1T3 1032 aa7.69□□□□□ -1.18
COPS3-216ENST00000579716 MIGA1Q8NAN2 632 aa7.69□□□□□ -1.18
COPS3-216ENST00000579716 MNS1Q8NEH6 495 aa7.69□□□□□ -1.18
COPS3-216ENST00000579716 SYAP1Q96A49 352 aaPredicted RBP7.69□□□□□ -1.18
COPS3-216ENST00000579716 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.69□□□□□ -1.18
COPS3-216ENST00000579716 ACSS3Q9H6R3 686 aa7.69□□□□□ -1.18
COPS3-216ENST00000579716 C12orf49Q9H741 205 aa7.69□□□□□ -1.18
COPS3-216ENST00000579716 FAM105AQ9NUU6 356 aa7.69□□□□□ -1.18
COPS3-216ENST00000579716 SUN2Q9UH99 717 aa7.69□□□□□ -1.18
COPS3-216ENST00000579716 UNC13AQ9UPW8 1703 aa7.69□□□□□ -1.18
COPS3-216ENST00000579716 ERICH4A6NGS2 130 aa7.68□□□□□ -1.18
COPS3-216ENST00000579716 PHACTR2O75167 634 aa7.68□□□□□ -1.18
COPS3-216ENST00000579716 TRIM37O94972 964 aa7.68□□□□□ -1.18
COPS3-216ENST00000579716 POLR3DP05423 398 aaPredicted RBP7.68□□□□□ -1.18
COPS3-216ENST00000579716 U2AF1L5P0DN76 240 aaPredicted RBP7.68□□□□□ -1.18
COPS3-216ENST00000579716 EDN3P14138 238 aa7.68□□□□□ -1.18
COPS3-216ENST00000579716 GRIA4P48058 902 aa7.68□□□□□ -1.18
COPS3-216ENST00000579716 U2AF1Q01081 240 aaKnown RBP eCLIP7.68□□□□□ -1.18
COPS3-216ENST00000579716 SPRED3Q2MJR0 410 aa7.68□□□□□ -1.18
COPS3-216ENST00000579716 BRDTQ58F21 947 aaPredicted RBP7.68□□□□□ -1.18
COPS3-216ENST00000579716 CPLX2Q6PUV4 134 aaKnown RBP7.68□□□□□ -1.18
COPS3-216ENST00000579716 BCL7CQ8WUZ0 217 aaPredicted RBP7.68□□□□□ -1.18
COPS3-216ENST00000579716 JARID2Q92833 1246 aaPredicted RBP7.68□□□□□ -1.18
COPS3-216ENST00000579716 ASIC4Q96FT7 647 aa7.68□□□□□ -1.18
COPS3-216ENST00000579716 BORCS6Q96GS4 357 aa7.68□□□□□ -1.18
COPS3-216ENST00000579716 CDK5RAP3Q96JB5 506 aa7.68□□□□□ -1.18
COPS3-216ENST00000579716 TCF12Q99081 682 aa7.68□□□□□ -1.18
COPS3-216ENST00000579716 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.68□□□□□ -1.184e-9■■■■■ 32.8
COPS3-216ENST00000579716 TRIM56Q9BRZ2 755 aaKnown RBP7.68□□□□□ -1.18
COPS3-216ENST00000579716 ZFYVE28Q9HCC9 887 aa7.68□□□□□ -1.18
COPS3-216ENST00000579716 PTPRHQ9HD43 1115 aa7.68□□□□□ -1.18
COPS3-216ENST00000579716 RIC8AQ9NPQ8 531 aa7.68□□□□□ -1.18
COPS3-216ENST00000579716 PGAP2Q9UHJ9 254 aa7.68□□□□□ -1.18
COPS3-216ENST00000579716 H3BRB1 525 aa7.67□□□□□ -1.18
COPS3-216ENST00000579716 HTATSF1O43719 755 aaKnown RBP7.67□□□□□ -1.18
COPS3-216ENST00000579716 JUNBP17275 347 aaPredicted RBP7.67□□□□□ -1.18
COPS3-216ENST00000579716 PAX7P23759 505 aa7.67□□□□□ -1.18
COPS3-216ENST00000579716 MAOBP27338 520 aa7.67□□□□□ -1.18
COPS3-216ENST00000579716 OAS2P29728 719 aaKnown RBP7.67□□□□□ -1.18
COPS3-216ENST00000579716 MASP1P48740 699 aa7.67□□□□□ -1.18
COPS3-216ENST00000579716 NUCB1Q02818 461 aa7.67□□□□□ -1.18
COPS3-216ENST00000579716 PUM3Q15397 648 aaKnown RBP7.67□□□□□ -1.18
COPS3-216ENST00000579716 ZNF394Q53GI3 561 aa7.67□□□□□ -1.18
COPS3-216ENST00000579716 DNAJC21Q5F1R6 531 aaKnown RBP7.67□□□□□ -1.18
COPS3-216ENST00000579716 WDR45BQ5MNZ6 344 aa7.67□□□□□ -1.18
COPS3-216ENST00000579716 DUSP27Q5VZP5 1158 aa7.67□□□□□ -1.18
COPS3-216ENST00000579716 ZNF574Q6ZN55 896 aaPredicted RBP7.67□□□□□ -1.18
COPS3-216ENST00000579716 GLYCTKQ8IVS8 523 aa7.67□□□□□ -1.18
COPS3-216ENST00000579716 SAMD14Q8IZD0 417 aaPredicted RBP7.67□□□□□ -1.18
COPS3-216ENST00000579716 IFNL2Q8IZJ0 200 aa7.67□□□□□ -1.18
COPS3-216ENST00000579716 NGEFQ8N5V2 710 aa7.67□□□□□ -1.18
COPS3-216ENST00000579716 FBXO41Q8TF61 875 aa7.67□□□□□ -1.18
COPS3-216ENST00000579716 APPBP2Q92624 585 aa7.67□□□□□ -1.18
COPS3-216ENST00000579716 TBC1D31Q96DN5 1066 aa7.67□□□□□ -1.18
COPS3-216ENST00000579716 VMP1Q96GC9 406 aa7.67□□□□□ -1.18
COPS3-216ENST00000579716 TMEM87BQ96K49 555 aa7.67□□□□□ -1.18
COPS3-216ENST00000579716 SRPK1Q96SB4 655 aaKnown RBP7.67□□□□□ -1.18
COPS3-216ENST00000579716 XPO4Q9C0E2 1151 aaKnown RBP7.67□□□□□ -1.18
COPS3-216ENST00000579716 DHX36Q9H2U1 1008 aaKnown RBP7.67□□□□□ -1.18
COPS3-216ENST00000579716 TUT1Q9H6E5 874 aaKnown RBP7.67□□□□□ -1.18
COPS3-216ENST00000579716 NGRNQ9NPE2 291 aaKnown RBP7.67□□□□□ -1.18
COPS3-216ENST00000579716 FANCLQ9NW38 375 aa7.67□□□□□ -1.18
COPS3-216ENST00000579716 WASHC2AQ641Q2 1341 aa7.67□□□□□ -1.18
COPS3-216ENST00000579716 IQCA1LA6NCM1 817 aa7.66□□□□□ -1.18
COPS3-216ENST00000579716 PRSS47A8MTI9 375 aa7.66□□□□□ -1.18
COPS3-216ENST00000579716 SORBS3O60504 671 aa7.66□□□□□ -1.18
COPS3-216ENST00000579716 ALDH1L1O75891 902 aa7.66□□□□□ -1.18
COPS3-216ENST00000579716 IPO7O95373 1038 aaKnown RBP7.66□□□□□ -1.18
COPS3-216ENST00000579716 ABL1P00519 1130 aa7.66□□□□□ -1.18
COPS3-216ENST00000579716 SRGNP10124 158 aa7.66□□□□□ -1.18
COPS3-216ENST00000579716 HCLS1P14317 486 aaPredicted RBP7.66□□□□□ -1.18
COPS3-216ENST00000579716 KIF5BP33176 963 aa7.66□□□□□ -1.18
COPS3-216ENST00000579716 DDIT3P35638 169 aa7.66□□□□□ -1.18
COPS3-216ENST00000579716 SERINC3Q13530 473 aa7.66□□□□□ -1.18
COPS3-216ENST00000579716 KIF22Q14807 665 aa7.66□□□□□ -1.18
COPS3-216ENST00000579716 PPP4R3AQ6IN85 833 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms