RNA–Protein interactions for RNA: ENST00000579225.2

SRGAP2-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 3

Gene SRGAP2, Length 1,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-204ENST00000579225 FBXO28Q9NVF7 368 aa20.22■□□□□ 0.83
SRGAP2-204ENST00000579225 PHF24Q9UPV7 400 aa20.22■□□□□ 0.83
SRGAP2-204ENST00000579225 SMCHD1A6NHR9 2005 aa20.21■□□□□ 0.83
SRGAP2-204ENST00000579225 GPAA1O43292 621 aa20.21■□□□□ 0.83
SRGAP2-204ENST00000579225 PGK2P07205 417 aa20.21■□□□□ 0.83
SRGAP2-204ENST00000579225 TLE2Q04725 743 aa20.21■□□□□ 0.83
SRGAP2-204ENST00000579225 ZNF792Q3KQV3 632 aa20.21■□□□□ 0.83
SRGAP2-204ENST00000579225 CDX2Q99626 313 aaPredicted RBP20.21■□□□□ 0.83
SRGAP2-204ENST00000579225 KANSL2Q9H9L4 492 aa20.21■□□□□ 0.83
SRGAP2-204ENST00000579225 XPNPEP3Q9NQH7 507 aa20.21■□□□□ 0.83
SRGAP2-204ENST00000579225 DIS3Q9Y2L1 958 aaKnown RBP20.21■□□□□ 0.83
SRGAP2-204ENST00000579225 MYH8P13535 1937 aa20.21■□□□□ 0.83
SRGAP2-204ENST00000579225 PARP14Q460N5 1801 aa20.2■□□□□ 0.82
SRGAP2-204ENST00000579225 BAZ2AQ9UIF9 1905 aaKnown RBP20.2■□□□□ 0.82
SRGAP2-204ENST00000579225 PATL2C9JE40 543 aaKnown RBP20.2■□□□□ 0.82
SRGAP2-204ENST00000579225 VWA5AO00534 786 aa20.2■□□□□ 0.82
SRGAP2-204ENST00000579225 CHGBP05060 677 aa20.2■□□□□ 0.82
SRGAP2-204ENST00000579225 RARBP10826 455 aa20.2■□□□□ 0.82
SRGAP2-204ENST00000579225 STAT3P40763 770 aa20.2■□□□□ 0.82
SRGAP2-204ENST00000579225 KCTD2Q14681 263 aa20.2■□□□□ 0.82
SRGAP2-204ENST00000579225 MCMDC2Q4G0Z9 681 aa20.2■□□□□ 0.82
SRGAP2-204ENST00000579225 SBK1Q52WX2 424 aa20.2■□□□□ 0.82
SRGAP2-204ENST00000579225 TINF2Q9BSI4 451 aa20.2■□□□□ 0.82
SRGAP2-204ENST00000579225 TACC3Q9Y6A5 838 aa20.2■□□□□ 0.82
SRGAP2-204ENST00000579225 TAL1P17542 331 aaPredicted RBP20.19■□□□□ 0.82
SRGAP2-204ENST00000579225 SMAD3P84022 425 aaKnown RBP20.19■□□□□ 0.82
SRGAP2-204ENST00000579225 TTC22Q5TAA0 569 aa20.19■□□□□ 0.82
SRGAP2-204ENST00000579225 RNF180Q86T96 592 aa20.19■□□□□ 0.82
SRGAP2-204ENST00000579225 ZNF214Q9UL59 606 aaPredicted RBP20.19■□□□□ 0.82
SRGAP2-204ENST00000579225 PPP1R9AQ9ULJ8 1098 aa20.19■□□□□ 0.82
SRGAP2-204ENST00000579225 PGK1P00558 417 aa20.18■□□□□ 0.82
SRGAP2-204ENST00000579225 APPP05067 770 aa20.18■□□□□ 0.82
SRGAP2-204ENST00000579225 ITGB8P26012 769 aa20.18■□□□□ 0.82
SRGAP2-204ENST00000579225 CTR9Q6PD62 1173 aa20.18■□□□□ 0.82
SRGAP2-204ENST00000579225 REPS2Q8NFH8 660 aa20.18■□□□□ 0.82
SRGAP2-204ENST00000579225 GOPCQ9HD26 462 aa20.18■□□□□ 0.82
SRGAP2-204ENST00000579225 DIAPH3Q9NSV4 1193 aa20.18■□□□□ 0.82
SRGAP2-204ENST00000579225 COL11A1P12107 1806 aaPredicted RBP20.18■□□□□ 0.82
SRGAP2-204ENST00000579225 SLC3A2P08195 630 aaKnown RBP20.17■□□□□ 0.82
SRGAP2-204ENST00000579225 CLTBP09497 229 aa20.17■□□□□ 0.82
SRGAP2-204ENST00000579225 ZNF865P0CJ78 1059 aaPredicted RBP20.17■□□□□ 0.82
SRGAP2-204ENST00000579225 SDSP20132 328 aa20.17■□□□□ 0.82
SRGAP2-204ENST00000579225 COPB2P35606 906 aa20.17■□□□□ 0.82
SRGAP2-204ENST00000579225 FAM83BQ5T0W9 1011 aa20.17■□□□□ 0.82
SRGAP2-204ENST00000579225 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.17■□□□□ 0.82
SRGAP2-204ENST00000579225 TTYH1Q9H313 450 aaPredicted RBP20.17■□□□□ 0.82
SRGAP2-204ENST00000579225 GSG1L2A8MUP6 293 aa20.16■□□□□ 0.82
SRGAP2-204ENST00000579225 KIAA0355O15063 1070 aa20.16■□□□□ 0.82
SRGAP2-204ENST00000579225 PDE4AP27815 886 aa20.16■□□□□ 0.82
SRGAP2-204ENST00000579225 TDO2P48775 406 aa20.16■□□□□ 0.82
SRGAP2-204ENST00000579225 RUFY2Q8WXA3 655 aa20.16■□□□□ 0.82
SRGAP2-204ENST00000579225 PPP4R2Q9NY27 417 aa20.16■□□□□ 0.82
SRGAP2-204ENST00000579225 A0A1W2PQ45 241 aaPredicted RBP20.15■□□□□ 0.82
SRGAP2-204ENST00000579225 A0A1W2PQY0 241 aa20.15■□□□□ 0.82
SRGAP2-204ENST00000579225 M0R2C6 588 aa20.15■□□□□ 0.82
SRGAP2-204ENST00000579225 RAD21O60216 631 aa20.15■□□□□ 0.82
SRGAP2-204ENST00000579225 AKR1A1P14550 325 aa20.15■□□□□ 0.82
SRGAP2-204ENST00000579225 EPHB4P54760 987 aa20.15■□□□□ 0.82
SRGAP2-204ENST00000579225 MAFAQ8NHW3 353 aaPredicted RBP20.15■□□□□ 0.82
SRGAP2-204ENST00000579225 NAPBQ9H115 298 aa20.15■□□□□ 0.82
SRGAP2-204ENST00000579225 CNPY2Q9Y2B0 182 aa20.15■□□□□ 0.82
SRGAP2-204ENST00000579225 ROBO3Q96MS0 1386 aa20.15■□□□□ 0.82
SRGAP2-204ENST00000579225 PLXNA1Q9UIW2 1896 aa20.14■□□□□ 0.81
SRGAP2-204ENST00000579225 ADAMTS4O75173 837 aa20.14■□□□□ 0.81
SRGAP2-204ENST00000579225 RAG1P15918 1043 aa20.14■□□□□ 0.81
SRGAP2-204ENST00000579225 NT5C2P49902 561 aa20.14■□□□□ 0.81
SRGAP2-204ENST00000579225 ALX1Q15699 326 aa20.14■□□□□ 0.81
SRGAP2-204ENST00000579225 IFNL3Q8IZI9 196 aa20.14■□□□□ 0.81
SRGAP2-204ENST00000579225 MYLIPQ8WY64 445 aa20.14■□□□□ 0.81
SRGAP2-204ENST00000579225 LENG1Q96BZ8 264 aaPredicted RBP20.14■□□□□ 0.81
SRGAP2-204ENST00000579225 TSEN34Q9BSV6 310 aaKnown RBP20.14■□□□□ 0.81
SRGAP2-204ENST00000579225 EYSQ5T1H1 3165 aa20.14■□□□□ 0.81
SRGAP2-204ENST00000579225 ZMYM6O95789 1325 aa20.13■□□□□ 0.81
SRGAP2-204ENST00000579225 PQBP1O60828 265 aaKnown RBP20.13■□□□□ 0.81
SRGAP2-204ENST00000579225 MSL3Q8N5Y2 521 aaKnown RBP20.13■□□□□ 0.81
SRGAP2-204ENST00000579225 RNPC3Q96LT9 517 aaKnown RBP20.13■□□□□ 0.81
SRGAP2-204ENST00000579225 TOX2Q96NM4 488 aa20.13■□□□□ 0.81
SRGAP2-204ENST00000579225 NUP88Q99567 741 aaPredicted RBP20.13■□□□□ 0.81
SRGAP2-204ENST00000579225 SLF1Q9BQI6 1058 aa20.13■□□□□ 0.81
SRGAP2-204ENST00000579225 TEX13BQ9BXU2 312 aa20.13■□□□□ 0.81
SRGAP2-204ENST00000579225 TMEM39AQ9NV64 488 aa20.13■□□□□ 0.81
SRGAP2-204ENST00000579225 CCDC171Q6TFL3 1326 aa20.12■□□□□ 0.81
SRGAP2-204ENST00000579225 RAD50Q92878 1312 aa20.12■□□□□ 0.81
SRGAP2-204ENST00000579225 F5H6K3 240 aa20.12■□□□□ 0.81
SRGAP2-204ENST00000579225 SNAI1O95863 264 aaPredicted RBP20.12■□□□□ 0.81
SRGAP2-204ENST00000579225 RASA1P20936 1047 aa20.12■□□□□ 0.81
SRGAP2-204ENST00000579225 ACLYP53396 1101 aa20.12■□□□□ 0.81
SRGAP2-204ENST00000579225 PDE4BQ07343 736 aa20.12■□□□□ 0.81
SRGAP2-204ENST00000579225 KLRC3Q07444 240 aa20.12■□□□□ 0.81
SRGAP2-204ENST00000579225 FAAP100Q0VG06 881 aa20.12■□□□□ 0.81
SRGAP2-204ENST00000579225 ANKRD33Q7Z3H0 272 aa20.12■□□□□ 0.81
SRGAP2-204ENST00000579225 KLHDC9Q8NEP7 349 aa20.12■□□□□ 0.81
SRGAP2-204ENST00000579225 DDX11Q96FC9 970 aa20.12■□□□□ 0.81
SRGAP2-204ENST00000579225 NYAP2Q9P242 653 aa20.12■□□□□ 0.81
SRGAP2-204ENST00000579225 FAM184BQ9ULE4 1060 aa20.12■□□□□ 0.81
SRGAP2-204ENST00000579225 RIPK3Q9Y572 518 aa20.12■□□□□ 0.81
SRGAP2-204ENST00000579225 SYNGAP1Q96PV0 1343 aa20.11■□□□□ 0.81
SRGAP2-204ENST00000579225 DNAJC25-GNG10A0A024R161 153 aa20.11■□□□□ 0.81
SRGAP2-204ENST00000579225 TMEM265A0A087WTH1 108 aa20.11■□□□□ 0.81
SRGAP2-204ENST00000579225 FPGSQ05932 587 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms