RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 BMP8BP34820 402 aa13.69□□□□□ -0.22
SSH2-208ENST00000579040 OAZ1P54368 228 aa13.69□□□□□ -0.22
SSH2-208ENST00000579040 LRRC26Q2I0M4 334 aa13.69□□□□□ -0.22
SSH2-208ENST00000579040 ZNF792Q3KQV3 632 aa13.69□□□□□ -0.22
SSH2-208ENST00000579040 MCMDC2Q4G0Z9 681 aa13.69□□□□□ -0.22
SSH2-208ENST00000579040 FAM47AQ5JRC9 791 aa13.69□□□□□ -0.22
SSH2-208ENST00000579040 SNRNP48Q6IEG0 339 aaKnown RBP13.69□□□□□ -0.22
SSH2-208ENST00000579040 LRRC47Q8N1G4 583 aaKnown RBP13.69□□□□□ -0.22
SSH2-208ENST00000579040 MSL3Q8N5Y2 521 aaKnown RBP13.69□□□□□ -0.22
SSH2-208ENST00000579040 GMCL1Q96IK5 515 aa13.69□□□□□ -0.22
SSH2-208ENST00000579040 GDF15Q99988 308 aa13.69□□□□□ -0.22
SSH2-208ENST00000579040 SLC38A10Q9HBR0 1119 aa13.69□□□□□ -0.22
SSH2-208ENST00000579040 LAMA4Q16363 1823 aa13.69□□□□□ -0.22
SSH2-208ENST00000579040 A0A0D9SFI3 127 aa13.68□□□□□ -0.22
SSH2-208ENST00000579040 TSPY2A6NKD2 308 aa13.68□□□□□ -0.22
SSH2-208ENST00000579040 ORC4O43929 436 aa13.68□□□□□ -0.22
SSH2-208ENST00000579040 PGK2P07205 417 aa13.68□□□□□ -0.22
SSH2-208ENST00000579040 CTDSPL2Q05D32 466 aa13.68□□□□□ -0.22
SSH2-208ENST00000579040 VPS53Q5VIR6 699 aa13.68□□□□□ -0.22
SSH2-208ENST00000579040 SLFN13Q68D06 897 aa13.68□□□□□ -0.22
SSH2-208ENST00000579040 FAM160B2Q86V87 743 aa13.68□□□□□ -0.22
SSH2-208ENST00000579040 KIFC2Q96AC6 838 aa13.68□□□□□ -0.22
SSH2-208ENST00000579040 TINF2Q9BSI4 451 aa13.68□□□□□ -0.22
SSH2-208ENST00000579040 FBXO40Q9UH90 709 aa13.68□□□□□ -0.22
SSH2-208ENST00000579040 ZMYND8Q9ULU4 1186 aaPredicted RBP13.68□□□□□ -0.22
SSH2-208ENST00000579040 KBTBD13C9JR72 458 aa13.67□□□□□ -0.22
SSH2-208ENST00000579040 PLA2G6O60733 806 aa13.67□□□□□ -0.22
SSH2-208ENST00000579040 FGRP09769 529 aa13.67□□□□□ -0.22
SSH2-208ENST00000579040 STAT2P52630 851 aa13.67□□□□□ -0.22
SSH2-208ENST00000579040 MFAP1P55081 439 aaKnown RBP13.67□□□□□ -0.22
SSH2-208ENST00000579040 NUCB1Q02818 461 aa13.67□□□□□ -0.22
SSH2-208ENST00000579040 CHD1LQ86WJ1 897 aa13.67□□□□□ -0.22
SSH2-208ENST00000579040 CHST13Q8NET6 341 aa13.67□□□□□ -0.22
SSH2-208ENST00000579040 CHURC1Q8WUH1 139 aa13.67□□□□□ -0.22
SSH2-208ENST00000579040 DDX11Q96FC9 970 aa13.67□□□□□ -0.22
SSH2-208ENST00000579040 FAM227BQ96M60 508 aa13.67□□□□□ -0.22
SSH2-208ENST00000579040 SENP6Q9GZR1 1112 aaPredicted RBP13.67□□□□□ -0.22
SSH2-208ENST00000579040 OSBPL3Q9H4L5 887 aa13.67□□□□□ -0.22
SSH2-208ENST00000579040 CCDC171Q6TFL3 1326 aa13.66□□□□□ -0.22
SSH2-208ENST00000579040 SYNGAP1Q96PV0 1343 aa13.66□□□□□ -0.22
SSH2-208ENST00000579040 DNAJC25-GNG10A0A024R161 153 aa13.66□□□□□ -0.22
SSH2-208ENST00000579040 TRIM6-TRIM34B2RNG4 842 aa13.66□□□□□ -0.22
SSH2-208ENST00000579040 TMEM232C9JQI7 657 aa13.66□□□□□ -0.22
SSH2-208ENST00000579040 FGAP02671 866 aa13.66□□□□□ -0.22
SSH2-208ENST00000579040 SYN1P17600 705 aa13.66□□□□□ -0.22
SSH2-208ENST00000579040 SLC1A4P43007 532 aa13.66□□□□□ -0.22
SSH2-208ENST00000579040 MAGEA10P43363 369 aaPredicted RBP13.66□□□□□ -0.22
SSH2-208ENST00000579040 NOVP48745 357 aa13.66□□□□□ -0.22
SSH2-208ENST00000579040 NMIQ13287 307 aaPredicted RBP13.66□□□□□ -0.22
SSH2-208ENST00000579040 PRAMEF19Q5SWL8 479 aa13.66□□□□□ -0.22
SSH2-208ENST00000579040 ZNF467Q7Z7K2 595 aaPredicted RBP13.66□□□□□ -0.22
SSH2-208ENST00000579040 PLEKHM2Q8IWE5 1019 aa13.66□□□□□ -0.22
SSH2-208ENST00000579040 CPXCR1Q8N123 301 aa13.66□□□□□ -0.22
SSH2-208ENST00000579040 EXOC6Q8TAG9 804 aa13.66□□□□□ -0.22
SSH2-208ENST00000579040 STAG1Q8WVM7 1258 aa13.66□□□□□ -0.22
SSH2-208ENST00000579040 RAVER2Q9HCJ3 691 aaKnown RBP13.66□□□□□ -0.22
SSH2-208ENST00000579040 IL17RBQ9NRM6 502 aa13.66□□□□□ -0.22
SSH2-208ENST00000579040 STX8Q9UNK0 236 aa13.66□□□□□ -0.22
SSH2-208ENST00000579040 CNPY2Q9Y2B0 182 aa13.66□□□□□ -0.22
SSH2-208ENST00000579040 RIPK3Q9Y572 518 aa13.66□□□□□ -0.22
SSH2-208ENST00000579040 LTBP2Q14767 1821 aa13.65□□□□□ -0.22
SSH2-208ENST00000579040 RANBP6O60518 1105 aaKnown RBP13.65□□□□□ -0.22
SSH2-208ENST00000579040 IGHDP01880 384 aa13.65□□□□□ -0.22
SSH2-208ENST00000579040 HSPD1P10809 573 aaKnown RBP13.65□□□□□ -0.22
SSH2-208ENST00000579040 RARBP10826 455 aa13.65□□□□□ -0.22
SSH2-208ENST00000579040 PCP11498 1178 aaKnown RBP13.65□□□□□ -0.22
SSH2-208ENST00000579040 AKR1A1P14550 325 aa13.65□□□□□ -0.22
SSH2-208ENST00000579040 LRRC41Q15345 812 aa13.65□□□□□ -0.22
SSH2-208ENST00000579040 GJC2Q5T442 439 aaPredicted RBP13.65□□□□□ -0.22
SSH2-208ENST00000579040 RCSD1Q6JBY9 416 aa13.65□□□□□ -0.22
SSH2-208ENST00000579040 B4GALNT3Q6L9W6 998 aa13.65□□□□□ -0.22
SSH2-208ENST00000579040 MAMDC4Q6UXC1 1216 aa13.65□□□□□ -0.22
SSH2-208ENST00000579040 RILPL2Q969X0 211 aa13.65□□□□□ -0.22
SSH2-208ENST00000579040 ISY1Q9ULR0 285 aaKnown RBP13.65□□□□□ -0.22
SSH2-208ENST00000579040 NMT2O60551 498 aa13.64□□□□□ -0.23
SSH2-208ENST00000579040 ZNF865P0CJ78 1059 aaPredicted RBP13.64□□□□□ -0.23
SSH2-208ENST00000579040 MCCP23508 829 aa13.64□□□□□ -0.23
SSH2-208ENST00000579040 IKQ13123 557 aaPredicted RBP13.64□□□□□ -0.23
SSH2-208ENST00000579040 TKFCQ3LXA3 575 aa13.64□□□□□ -0.23
SSH2-208ENST00000579040 ANO1Q5XXA6 986 aa13.64□□□□□ -0.23
SSH2-208ENST00000579040 ZNF589Q86UQ0 364 aaPredicted RBP13.64□□□□□ -0.23
SSH2-208ENST00000579040 ANKRD35Q8N283 1001 aa13.64□□□□□ -0.23
SSH2-208ENST00000579040 XPNPEP3Q9NQH7 507 aa13.64□□□□□ -0.23
SSH2-208ENST00000579040 INCENPQ9NQS7 918 aa13.64□□□□□ -0.23
SSH2-208ENST00000579040 TCP11L1Q9NUJ3 509 aa13.64□□□□□ -0.23
SSH2-208ENST00000579040 TACC3Q9Y6A5 838 aa13.64□□□□□ -0.23
SSH2-208ENST00000579040 RANBP2P49792 3224 aaKnown RBP13.64□□□□□ -0.23
SSH2-208ENST00000579040 HIP1O00291 1037 aa13.63□□□□□ -0.23
SSH2-208ENST00000579040 SDSP20132 328 aa13.63□□□□□ -0.23
SSH2-208ENST00000579040 SLC4A3P48751 1232 aa13.63□□□□□ -0.23
SSH2-208ENST00000579040 NT5C2P49902 561 aa13.63□□□□□ -0.23
SSH2-208ENST00000579040 ATN1P54259 1190 aaPredicted RBP13.63□□□□□ -0.23
SSH2-208ENST00000579040 RTP1P59025 263 aa13.63□□□□□ -0.23
SSH2-208ENST00000579040 SNX17Q15036 470 aa13.63□□□□□ -0.23
SSH2-208ENST00000579040 C1orf53Q5VUE5 145 aa13.63□□□□□ -0.23
SSH2-208ENST00000579040 SLC39A5Q6ZMH5 540 aa13.63□□□□□ -0.23
SSH2-208ENST00000579040 RNF180Q86T96 592 aa13.63□□□□□ -0.23
SSH2-208ENST00000579040 DCAF4Q8WV16 495 aa13.63□□□□□ -0.23
SSH2-208ENST00000579040 ACAD9Q9H845 621 aa13.63□□□□□ -0.23
SSH2-208ENST00000579040 TOMM22Q9NS69 142 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms