RNA–Protein interactions for RNA: ENST00000578557.1

PPP4R1-210, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-210ENST00000578557 FOXP2O15409 715 aa10.09□□□□□ -0.79
PPP4R1-210ENST00000578557 FLOT1O75955 427 aa10.09□□□□□ -0.79
PPP4R1-210ENST00000578557 HMGB1P09429 215 aaKnown RBP10.09□□□□□ -0.79
PPP4R1-210ENST00000578557 HOXC6P09630 235 aa10.09□□□□□ -0.79
PPP4R1-210ENST00000578557 SLURP2P0DP57 97 aa10.09□□□□□ -0.79
PPP4R1-210ENST00000578557 BMP3P12645 472 aa10.09□□□□□ -0.79
PPP4R1-210ENST00000578557 GRK4P32298 578 aa10.09□□□□□ -0.79
PPP4R1-210ENST00000578557 SLC1A4P43007 532 aa10.09□□□□□ -0.79
PPP4R1-210ENST00000578557 ATP2B2Q01814 1243 aa10.09□□□□□ -0.79
PPP4R1-210ENST00000578557 KRT32Q14532 448 aa10.09□□□□□ -0.79
PPP4R1-210ENST00000578557 E2F4Q16254 413 aa10.09□□□□□ -0.79
PPP4R1-210ENST00000578557 TKFCQ3LXA3 575 aa10.09□□□□□ -0.79
PPP4R1-210ENST00000578557 LCE2DQ5TA82 110 aaPredicted RBP10.09□□□□□ -0.79
PPP4R1-210ENST00000578557 VPS53Q5VIR6 699 aa10.09□□□□□ -0.79
PPP4R1-210ENST00000578557 GPR153Q6NV75 609 aa10.09□□□□□ -0.79
PPP4R1-210ENST00000578557 CCDC129Q6ZRS4 1044 aa10.09□□□□□ -0.79
PPP4R1-210ENST00000578557 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.09□□□□□ -0.79
PPP4R1-210ENST00000578557 PLEKHH3Q7Z736 793 aa10.09□□□□□ -0.79
PPP4R1-210ENST00000578557 ZNF589Q86UQ0 364 aaPredicted RBP10.09□□□□□ -0.79
PPP4R1-210ENST00000578557 MSL3Q8N5Y2 521 aaKnown RBP10.09□□□□□ -0.79
PPP4R1-210ENST00000578557 OXER1Q8TDS5 423 aa10.09□□□□□ -0.79
PPP4R1-210ENST00000578557 CEP95Q96GE4 821 aa10.09□□□□□ -0.79
PPP4R1-210ENST00000578557 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.09□□□□□ -0.79
PPP4R1-210ENST00000578557 NRBP1Q9UHY1 535 aa10.09□□□□□ -0.79
PPP4R1-210ENST00000578557 PPP1R9AQ9ULJ8 1098 aa10.09□□□□□ -0.79
PPP4R1-210ENST00000578557 STX8Q9UNK0 236 aa10.09□□□□□ -0.79
PPP4R1-210ENST00000578557 DIS3Q9Y2L1 958 aaKnown RBP10.09□□□□□ -0.79
PPP4R1-210ENST00000578557 PCDHGA4Q9Y5G9 962 aa10.09□□□□□ -0.79
PPP4R1-210ENST00000578557 DOCK2Q92608 1830 aa10.08□□□□□ -0.8
PPP4R1-210ENST00000578557 SPDYE16A6NNV3 312 aaPredicted RBP10.08□□□□□ -0.8
PPP4R1-210ENST00000578557 CDC45O75419 566 aa10.08□□□□□ -0.8
PPP4R1-210ENST00000578557 REC8O95072 547 aa10.08□□□□□ -0.8
PPP4R1-210ENST00000578557 HOXB1P14653 301 aaPredicted RBP10.08□□□□□ -0.8
PPP4R1-210ENST00000578557 ZKSCAN1P17029 563 aaPredicted RBP10.08□□□□□ -0.8
PPP4R1-210ENST00000578557 RGS2P41220 211 aa10.08□□□□□ -0.8
PPP4R1-210ENST00000578557 STAT2P52630 851 aa10.08□□□□□ -0.8
PPP4R1-210ENST00000578557 CTDSPL2Q05D32 466 aa10.08□□□□□ -0.8
PPP4R1-210ENST00000578557 ZYXQ15942 572 aaKnown RBP10.08□□□□□ -0.8
PPP4R1-210ENST00000578557 TSGA10IPQ3SY00 556 aa10.08□□□□□ -0.8
PPP4R1-210ENST00000578557 SLFN13Q68D06 897 aa10.08□□□□□ -0.8
PPP4R1-210ENST00000578557 RALYLQ86SE5 291 aaKnown RBP10.08□□□□□ -0.8
PPP4R1-210ENST00000578557 CCDC84Q86UT8 332 aaPredicted RBP10.08□□□□□ -0.8
PPP4R1-210ENST00000578557 SAMD3Q8N6K7 520 aa10.08□□□□□ -0.8
PPP4R1-210ENST00000578557 CHST13Q8NET6 341 aa10.08□□□□□ -0.8
PPP4R1-210ENST00000578557 IL27Q8NEV9 243 aa10.08□□□□□ -0.8
PPP4R1-210ENST00000578557 NCOA7Q8NI08 942 aa10.08□□□□□ -0.8
PPP4R1-210ENST00000578557 MAP3K14Q99558 947 aa10.08□□□□□ -0.8
PPP4R1-210ENST00000578557 SLF1Q9BQI6 1058 aa10.08□□□□□ -0.8
PPP4R1-210ENST00000578557 UBAC1Q9BSL1 405 aa10.08□□□□□ -0.8
PPP4R1-210ENST00000578557 SPATC1LQ9H0A9 340 aa10.08□□□□□ -0.8
PPP4R1-210ENST00000578557 LOC102724159A0A0B4J2E5 919 aa10.07□□□□□ -0.8
PPP4R1-210ENST00000578557 VWA5AO00534 786 aa10.07□□□□□ -0.8
PPP4R1-210ENST00000578557 MSCO60682 206 aa10.07□□□□□ -0.8
PPP4R1-210ENST00000578557 PRDM1O75626 825 aa10.07□□□□□ -0.8
PPP4R1-210ENST00000578557 NDUFB10O96000 172 aa10.07□□□□□ -0.8
PPP4R1-210ENST00000578557 FCER1AP12319 257 aa10.07□□□□□ -0.8
PPP4R1-210ENST00000578557 STAT3P40763 770 aa10.07□□□□□ -0.8
PPP4R1-210ENST00000578557 PWP2Q15269 919 aaKnown RBP10.07□□□□□ -0.8
PPP4R1-210ENST00000578557 BTNL9Q6UXG8 535 aa10.07□□□□□ -0.8
PPP4R1-210ENST00000578557 RIOX2Q8IUF8 465 aa10.07□□□□□ -0.8
PPP4R1-210ENST00000578557 TEX2Q8IWB9 1127 aa10.07□□□□□ -0.8
PPP4R1-210ENST00000578557 ZSCAN10Q96SZ4 725 aaPredicted RBP10.07□□□□□ -0.8
PPP4R1-210ENST00000578557 ESYT1Q9BSJ8 1104 aa10.07□□□□□ -0.8
PPP4R1-210ENST00000578557 TEX13BQ9BXU2 312 aa10.07□□□□□ -0.8
PPP4R1-210ENST00000578557 GJD2Q9UKL4 321 aa10.07□□□□□ -0.8
PPP4R1-210ENST00000578557 CCDC85CA6NKD9 419 aa10.06□□□□□ -0.8
PPP4R1-210ENST00000578557 B4DLN1 442 aa10.06□□□□□ -0.8
PPP4R1-210ENST00000578557 ADCY3O60266 1144 aa10.06□□□□□ -0.8
PPP4R1-210ENST00000578557 PTPREP23469 700 aa10.06□□□□□ -0.8
PPP4R1-210ENST00000578557 FLT3LGP49771 235 aa10.06□□□□□ -0.8
PPP4R1-210ENST00000578557 MRPL12P52815 198 aaKnown RBP10.06□□□□□ -0.8
PPP4R1-210ENST00000578557 MAP2K5Q13163 448 aa10.06□□□□□ -0.8
PPP4R1-210ENST00000578557 PPP2R5BQ15173 497 aa10.06□□□□□ -0.8
PPP4R1-210ENST00000578557 ARSIQ5FYB1 569 aa10.06□□□□□ -0.8
PPP4R1-210ENST00000578557 FAM47AQ5JRC9 791 aa10.06□□□□□ -0.8
PPP4R1-210ENST00000578557 GPR142Q7Z601 462 aa10.06□□□□□ -0.8
PPP4R1-210ENST00000578557 ZNF333Q96JL9 665 aa10.06□□□□□ -0.8
PPP4R1-210ENST00000578557 TMEM87BQ96K49 555 aa10.06□□□□□ -0.8
PPP4R1-210ENST00000578557 KAT14Q9H8E8 782 aa10.06□□□□□ -0.8
PPP4R1-210ENST00000578557 SLC38A10Q9HBR0 1119 aa10.06□□□□□ -0.8
PPP4R1-210ENST00000578557 IL17RBQ9NRM6 502 aa10.06□□□□□ -0.8
PPP4R1-210ENST00000578557 ZSWIM5Q9P217 1185 aa10.06□□□□□ -0.8
PPP4R1-210ENST00000578557 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.06□□□□□ -0.8
PPP4R1-210ENST00000578557 BIN2Q9UBW5 565 aaPredicted RBP10.06□□□□□ -0.8
PPP4R1-210ENST00000578557 PCNTO95613 3336 aa10.06□□□□□ -0.8
PPP4R1-210ENST00000578557 RAD21O60216 631 aa10.05□□□□□ -0.8
PPP4R1-210ENST00000578557 HMGCRP04035 888 aa10.05□□□□□ -0.8
PPP4R1-210ENST00000578557 GJB1P08034 283 aa10.05□□□□□ -0.8
PPP4R1-210ENST00000578557 CALM1P0DP23 149 aa10.05□□□□□ -0.8
PPP4R1-210ENST00000578557 CALM2P0DP24 149 aa10.05□□□□□ -0.8
PPP4R1-210ENST00000578557 CALM3P0DP25 149 aa10.05□□□□□ -0.8
PPP4R1-210ENST00000578557 SNHG28P0DPA3 235 aa10.05□□□□□ -0.8
PPP4R1-210ENST00000578557 SMARCA1P28370 1054 aa10.05□□□□□ -0.8
PPP4R1-210ENST00000578557 MCM5P33992 734 aa10.05□□□□□ -0.8
PPP4R1-210ENST00000578557 KCTD2Q14681 263 aa10.05□□□□□ -0.8
PPP4R1-210ENST00000578557 Q3C1V9 767 aa10.05□□□□□ -0.8
PPP4R1-210ENST00000578557 ASPRV1Q53RT3 343 aa10.05□□□□□ -0.8
PPP4R1-210ENST00000578557 RRP12Q5JTH9 1297 aaKnown RBP10.05□□□□□ -0.8
PPP4R1-210ENST00000578557 MORN1Q5T089 497 aa10.05□□□□□ -0.8
PPP4R1-210ENST00000578557 FAM83BQ5T0W9 1011 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms