RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 SH3GLB2Q9NR46 395 aa19.49■□□□□ 0.71
SREBF1-218ENST00000578469 MYH6P13533 1939 aa19.49■□□□□ 0.71
SREBF1-218ENST00000578469 hCG_1642624A0A1W2PR95 340 aa19.48■□□□□ 0.71
SREBF1-218ENST00000578469 CALML3P27482 149 aa19.48■□□□□ 0.71
SREBF1-218ENST00000578469 ME1P48163 572 aa19.48■□□□□ 0.71
SREBF1-218ENST00000578469 TNNI2P48788 182 aa19.48■□□□□ 0.71
SREBF1-218ENST00000578469 ZNF280AP59817 542 aaPredicted RBP19.48■□□□□ 0.71
SREBF1-218ENST00000578469 TMEM179Q6ZVK1 233 aa19.48■□□□□ 0.71
SREBF1-218ENST00000578469 FAM83AQ86UY5 434 aa19.48■□□□□ 0.71
SREBF1-218ENST00000578469 LINC00301Q8NCQ3 95 aa19.48■□□□□ 0.71
SREBF1-218ENST00000578469 PGBD1Q96JS3 809 aa19.48■□□□□ 0.71
SREBF1-218ENST00000578469 DNAJC18Q9H819 358 aa19.48■□□□□ 0.71
SREBF1-218ENST00000578469 KANSL2Q9H9L4 492 aa19.48■□□□□ 0.71
SREBF1-218ENST00000578469 VEZTQ9HBM0 779 aa19.48■□□□□ 0.71
SREBF1-218ENST00000578469 MYOZ2Q9NPC6 264 aa19.48■□□□□ 0.71
SREBF1-218ENST00000578469 CLIC4Q9Y696 253 aa19.48■□□□□ 0.71
SREBF1-218ENST00000578469 PITPNM2Q9BZ72 1349 aa19.48■□□□□ 0.71
SREBF1-218ENST00000578469 SPTLC2O15270 562 aa19.47■□□□□ 0.71
SREBF1-218ENST00000578469 MRE11P49959 708 aa19.47■□□□□ 0.71
SREBF1-218ENST00000578469 NLRP5P59047 1200 aa19.47■□□□□ 0.71
SREBF1-218ENST00000578469 ATP2B2Q01814 1243 aa19.47■□□□□ 0.71
SREBF1-218ENST00000578469 ABCB5Q2M3G0 1257 aa19.47■□□□□ 0.71
SREBF1-218ENST00000578469 RILPL1Q5EBL4 403 aa19.47■□□□□ 0.71
SREBF1-218ENST00000578469 ZBED3Q96IU2 234 aaPredicted RBP19.47■□□□□ 0.71
SREBF1-218ENST00000578469 FTOQ9C0B1 505 aaKnown RBP eCLIP19.47■□□□□ 0.71
SREBF1-218ENST00000578469 CABP5Q9NP86 173 aa19.47■□□□□ 0.71
SREBF1-218ENST00000578469 DDX19AQ9NUU7 478 aaKnown RBP19.47■□□□□ 0.71
SREBF1-218ENST00000578469 NYAP2Q9P242 653 aa19.47■□□□□ 0.71
SREBF1-218ENST00000578469 SYCE3A1L190 88 aa19.46■□□□□ 0.71
SREBF1-218ENST00000578469 PDHBP11177 359 aa19.46■□□□□ 0.71
SREBF1-218ENST00000578469 PKN2Q16513 984 aaKnown RBP19.46■□□□□ 0.71
SREBF1-218ENST00000578469 USP17L2Q6R6M4 530 aa19.46■□□□□ 0.71
SREBF1-218ENST00000578469 LRSAM1Q6UWE0 723 aa19.46■□□□□ 0.71
SREBF1-218ENST00000578469 LRRC47Q8N1G4 583 aaKnown RBP19.46■□□□□ 0.71
SREBF1-218ENST00000578469 CCDC148Q8NFR7 591 aa19.46■□□□□ 0.71
SREBF1-218ENST00000578469 PIBF1Q8WXW3 757 aa19.46■□□□□ 0.71
SREBF1-218ENST00000578469 RRP36Q96EU6 259 aaKnown RBP19.46■□□□□ 0.71
SREBF1-218ENST00000578469 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.46■□□□□ 0.71
SREBF1-218ENST00000578469 NOL7Q9UMY1 257 aaKnown RBP19.46■□□□□ 0.71
SREBF1-218ENST00000578469 ASTN2O75129 1339 aaPredicted RBP19.46■□□□□ 0.71
SREBF1-218ENST00000578469 FAM196BA6NMK8 535 aa19.45■□□□□ 0.7
SREBF1-218ENST00000578469 USP17L5A8MUK1 530 aa19.45■□□□□ 0.7
SREBF1-218ENST00000578469 GOLGA8HP0CJ92 632 aa19.45■□□□□ 0.7
SREBF1-218ENST00000578469 SLC39A14Q15043 492 aa19.45■□□□□ 0.7
SREBF1-218ENST00000578469 ADALQ6DHV7 355 aa19.45■□□□□ 0.7
SREBF1-218ENST00000578469 GALNT17Q6IS24 598 aa19.45■□□□□ 0.7
SREBF1-218ENST00000578469 CCDC73Q6ZRK6 1079 aa19.45■□□□□ 0.7
SREBF1-218ENST00000578469 CCDC12Q8WUD4 166 aaPredicted RBP19.45■□□□□ 0.7
SREBF1-218ENST00000578469 MKL1Q969V6 931 aa19.45■□□□□ 0.7
SREBF1-218ENST00000578469 SEC63Q9UGP8 760 aaKnown RBP19.45■□□□□ 0.7
SREBF1-218ENST00000578469 CEP131Q9UPN4 1083 aa19.45■□□□□ 0.7
SREBF1-218ENST00000578469 SIPA1L1O43166 1804 aa19.44■□□□□ 0.7
SREBF1-218ENST00000578469 A0A1W2PQ27 194 aa19.44■□□□□ 0.7
SREBF1-218ENST00000578469 A0A1W2PQ64 194 aa19.44■□□□□ 0.7
SREBF1-218ENST00000578469 A0A1W2PQD8 194 aa19.44■□□□□ 0.7
SREBF1-218ENST00000578469 WNT10BO00744 389 aa19.44■□□□□ 0.7
SREBF1-218ENST00000578469 PPP6R2O75170 966 aa19.44■□□□□ 0.7
SREBF1-218ENST00000578469 SNHG28P0DPA3 235 aa19.44■□□□□ 0.7
SREBF1-218ENST00000578469 LIG1P18858 919 aa19.44■□□□□ 0.7
SREBF1-218ENST00000578469 NF2P35240 595 aa19.44■□□□□ 0.7
SREBF1-218ENST00000578469 GPATCH4Q5T3I0 446 aaKnown RBP19.44■□□□□ 0.7
SREBF1-218ENST00000578469 PRPF38BQ5VTL8 546 aaKnown RBP19.44■□□□□ 0.7
SREBF1-218ENST00000578469 CCAR1Q8IX12 1150 aaKnown RBP19.44■□□□□ 0.7
SREBF1-218ENST00000578469 NUP62CLQ9H1M0 184 aa19.44■□□□□ 0.7
SREBF1-218ENST00000578469 PCDHA7Q9UN72 937 aa19.44■□□□□ 0.7
SREBF1-218ENST00000578469 TBC1D12O60347 775 aa19.43■□□□□ 0.7
SREBF1-218ENST00000578469 ICA1Q05084 483 aa19.43■□□□□ 0.7
SREBF1-218ENST00000578469 ZNF543Q08ER8 600 aa19.43■□□□□ 0.7
SREBF1-218ENST00000578469 NR5A1Q13285 461 aa19.43■□□□□ 0.7
SREBF1-218ENST00000578469 TNFAIP1Q13829 316 aa19.43■□□□□ 0.7
SREBF1-218ENST00000578469 TTLL12Q14166 644 aaPredicted RBP19.43■□□□□ 0.7
SREBF1-218ENST00000578469 OXER1Q8TDS5 423 aa19.43■□□□□ 0.7
SREBF1-218ENST00000578469 GRPEL1Q9HAV7 217 aa19.43■□□□□ 0.7
SREBF1-218ENST00000578469 GREB1LQ9C091 1923 aaPredicted RBP19.43■□□□□ 0.7
SREBF1-218ENST00000578469 hCG_1984214I3L0E3 225 aa19.42■□□□□ 0.7
SREBF1-218ENST00000578469 CYTH3O43739 400 aa19.42■□□□□ 0.7
SREBF1-218ENST00000578469 EEF2P13639 858 aaKnown RBP19.42■□□□□ 0.7
SREBF1-218ENST00000578469 SEPT2Q15019 361 aa19.42■□□□□ 0.7
SREBF1-218ENST00000578469 CCDC96Q2M329 555 aa19.42■□□□□ 0.7
SREBF1-218ENST00000578469 NBPF9Q3BBW0 867 aa19.42■□□□□ 0.7
SREBF1-218ENST00000578469 HEATR3Q7Z4Q2 680 aa19.42■□□□□ 0.7
SREBF1-218ENST00000578469 GAS2L3Q86XJ1 694 aa19.42■□□□□ 0.7
SREBF1-218ENST00000578469 CLEC10AQ8IUN9 316 aa19.42■□□□□ 0.7
SREBF1-218ENST00000578469 ZNF713Q8N859 430 aaPredicted RBP19.42■□□□□ 0.7
SREBF1-218ENST00000578469 FSIP1Q8NA03 581 aa19.42■□□□□ 0.7
SREBF1-218ENST00000578469 DCAF4Q8WV16 495 aa19.42■□□□□ 0.7
SREBF1-218ENST00000578469 MRPS27Q92552 414 aaKnown RBP19.42■□□□□ 0.7
SREBF1-218ENST00000578469 TSPY26PQ9H489 355 aa19.42■□□□□ 0.7
SREBF1-218ENST00000578469 RIOX1Q9H6W3 641 aa19.42■□□□□ 0.7
SREBF1-218ENST00000578469 BARHL2Q9NY43 387 aa19.42■□□□□ 0.7
SREBF1-218ENST00000578469 DACT1Q9NYF0 836 aa19.42■□□□□ 0.7
SREBF1-218ENST00000578469 PCDHA4Q9UN74 947 aa19.42■□□□□ 0.7
SREBF1-218ENST00000578469 GDF11O95390 407 aa19.41■□□□□ 0.7
SREBF1-218ENST00000578469 BMP15O95972 392 aa19.41■□□□□ 0.7
SREBF1-218ENST00000578469 SLURP2P0DP57 97 aa19.41■□□□□ 0.7
SREBF1-218ENST00000578469 BLIDQ8IZY5 108 aa19.41■□□□□ 0.7
SREBF1-218ENST00000578469 SHISA4Q96DD7 197 aa19.41■□□□□ 0.7
SREBF1-218ENST00000578469 CLSTN2Q9H4D0 955 aa19.41■□□□□ 0.7
SREBF1-218ENST00000578469 VAT1LQ9HCJ6 419 aa19.41■□□□□ 0.7
SREBF1-218ENST00000578469 GPCPD1Q9NPB8 672 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms