RNA–Protein interactions for RNA: ENST00000578446.1

USP22-208, Transcript of ubiquitin specific peptidase 22, humanhuman

TSL 3

Gene USP22, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP22-208ENST00000578446 TMX3Q96JJ7 454 aa12.4□□□□□ -0.42
USP22-208ENST00000578446 ZIC5Q96T25 663 aa12.4□□□□□ -0.42
USP22-208ENST00000578446 PARK7Q99497 189 aaKnown RBP12.4□□□□□ -0.42
USP22-208ENST00000578446 LZTS2Q9BRK4 669 aa12.4□□□□□ -0.42
USP22-208ENST00000578446 UBA5Q9GZZ9 404 aa12.4□□□□□ -0.42
USP22-208ENST00000578446 ASCC2Q9H1I8 757 aaPredicted RBP12.4□□□□□ -0.42
USP22-208ENST00000578446 TSHZ2Q9NRE2 1034 aa12.4□□□□□ -0.42
USP22-208ENST00000578446 FBXO28Q9NVF7 368 aa12.4□□□□□ -0.42
USP22-208ENST00000578446 SLC45A1Q9Y2W3 748 aa12.4□□□□□ -0.42
USP22-208ENST00000578446 MYH4Q9Y623 1939 aa12.4□□□□□ -0.42
USP22-208ENST00000578446 K7ELQ4 463 aaPredicted RBP12.39□□□□□ -0.43
USP22-208ENST00000578446 IGF2BP3O00425 579 aaKnown RBP eCLIP12.39□□□□□ -0.43
USP22-208ENST00000578446 CDKL5O76039 1030 aa12.39□□□□□ -0.43
USP22-208ENST00000578446 CDC27P30260 824 aa12.39□□□□□ -0.43
USP22-208ENST00000578446 MAP2K2P36507 400 aa12.39□□□□□ -0.43
USP22-208ENST00000578446 SCRN1Q12765 414 aa12.39□□□□□ -0.43
USP22-208ENST00000578446 COG2Q14746 738 aa12.39□□□□□ -0.43
USP22-208ENST00000578446 CCDC83Q8IWF9 413 aa12.39□□□□□ -0.43
USP22-208ENST00000578446 CCDC82Q8N4S0 544 aa12.39□□□□□ -0.43
USP22-208ENST00000578446 PTPN18Q99952 460 aa12.39□□□□□ -0.43
USP22-208ENST00000578446 CPVLQ9H3G5 476 aa12.39□□□□□ -0.43
USP22-208ENST00000578446 ZCCHC17Q9NP64 241 aaKnown RBP12.39□□□□□ -0.43
USP22-208ENST00000578446 PPP1R9AQ9ULJ8 1098 aa12.39□□□□□ -0.43
USP22-208ENST00000578446 CTDP1Q9Y5B0 961 aaPredicted RBP12.39□□□□□ -0.43
USP22-208ENST00000578446 MYPNQ86TC9 1320 aa12.38□□□□□ -0.43
USP22-208ENST00000578446 SPDYE16A6NNV3 312 aaPredicted RBP12.38□□□□□ -0.43
USP22-208ENST00000578446 PLA2G6O60733 806 aa12.38□□□□□ -0.43
USP22-208ENST00000578446 ADD1P35611 737 aaKnown RBP12.38□□□□□ -0.43
USP22-208ENST00000578446 HERVK_113P62684 666 aa12.38□□□□□ -0.43
USP22-208ENST00000578446 BECN1Q14457 450 aa12.38□□□□□ -0.43
USP22-208ENST00000578446 TAF1CQ15572 869 aaPredicted RBP12.38□□□□□ -0.43
USP22-208ENST00000578446 BTNL9Q6UXG8 535 aa12.38□□□□□ -0.43
USP22-208ENST00000578446 ADGRF4Q8IZF3 695 aa12.38□□□□□ -0.43
USP22-208ENST00000578446 CMTR1Q8N1G2 835 aaKnown RBP12.38□□□□□ -0.43
USP22-208ENST00000578446 SRBD1Q8N5C6 995 aaKnown RBP12.38□□□□□ -0.43
USP22-208ENST00000578446 PRPF38AQ8NAV1 312 aaKnown RBP12.38□□□□□ -0.43
USP22-208ENST00000578446 ATG4CQ96DT6 458 aa12.38□□□□□ -0.43
USP22-208ENST00000578446 SPZ1Q9BXG8 430 aa12.38□□□□□ -0.43
USP22-208ENST00000578446 VAT1LQ9HCJ6 419 aa12.38□□□□□ -0.43
USP22-208ENST00000578446 FAM217BQ9NTX9 383 aaPredicted RBP12.38□□□□□ -0.43
USP22-208ENST00000578446 HOXC10Q9NYD6 342 aa12.38□□□□□ -0.43
USP22-208ENST00000578446 PRR12Q9ULL5 1215 aa12.38□□□□□ -0.43
USP22-208ENST00000578446 ALDH1A1P00352 501 aa12.37□□□□□ -0.43
USP22-208ENST00000578446 CYP2C8P10632 490 aa12.37□□□□□ -0.43
USP22-208ENST00000578446 DSG3P32926 999 aa12.37□□□□□ -0.43
USP22-208ENST00000578446 TM4SF4P48230 202 aa12.37□□□□□ -0.43
USP22-208ENST00000578446 AKAP17AQ02040 695 aaKnown RBP12.37□□□□□ -0.43
USP22-208ENST00000578446 NBPF11Q86T75 865 aa12.37□□□□□ -0.43
USP22-208ENST00000578446 HOMER1Q86YM7 354 aa12.37□□□□□ -0.43
USP22-208ENST00000578446 TRIM22Q8IYM9 498 aa12.37□□□□□ -0.43
USP22-208ENST00000578446 GTF3C2Q8WUA4 911 aaPredicted RBP12.37□□□□□ -0.43
USP22-208ENST00000578446 PIBF1Q8WXW3 757 aa12.37□□□□□ -0.43
USP22-208ENST00000578446 RRP36Q96EU6 259 aaKnown RBP12.37□□□□□ -0.43
USP22-208ENST00000578446 SEC63Q9UGP8 760 aaKnown RBP12.37□□□□□ -0.43
USP22-208ENST00000578446 PTPRFP10586 1907 aa12.37□□□□□ -0.43
USP22-208ENST00000578446 CNTNAP5Q8WYK1 1306 aa12.37□□□□□ -0.43
USP22-208ENST00000578446 PTPDC1A2A3K4 754 aa12.36□□□□□ -0.43
USP22-208ENST00000578446 VWA5AO00534 786 aa12.36□□□□□ -0.43
USP22-208ENST00000578446 CYTH3O43739 400 aa12.36□□□□□ -0.43
USP22-208ENST00000578446 ZBED4O75132 1171 aa12.36□□□□□ -0.43
USP22-208ENST00000578446 PPFIA3O75145 1194 aa12.36□□□□□ -0.43
USP22-208ENST00000578446 HSP90AA1P07900 732 aaKnown RBP12.36□□□□□ -0.43
USP22-208ENST00000578446 IFNAR1P17181 557 aa12.36□□□□□ -0.43
USP22-208ENST00000578446 SMARCA1P28370 1054 aa12.36□□□□□ -0.43
USP22-208ENST00000578446 SNAP25P60880 206 aa12.36□□□□□ -0.43
USP22-208ENST00000578446 FUT2Q10981 343 aa12.36□□□□□ -0.43
USP22-208ENST00000578446 ST3GAL1Q11201 340 aa12.36□□□□□ -0.43
USP22-208ENST00000578446 CDC37Q16543 378 aaPredicted RBP12.36□□□□□ -0.43
USP22-208ENST00000578446 SLC35G1Q2M3R5 365 aa12.36□□□□□ -0.43
USP22-208ENST00000578446 CCDC174Q6PII3 467 aa12.36□□□□□ -0.43
USP22-208ENST00000578446 MB21D1Q8N884 522 aa12.36□□□□□ -0.43
USP22-208ENST00000578446 PHKBQ93100 1093 aa12.36□□□□□ -0.43
USP22-208ENST00000578446 P2RX7Q99572 595 aaKnown RBP12.36□□□□□ -0.43
USP22-208ENST00000578446 PAGR1Q9BTK6 254 aa12.36□□□□□ -0.43
USP22-208ENST00000578446 SLC26A6Q9BXS9 759 aa12.36□□□□□ -0.43
USP22-208ENST00000578446 JMJD4Q9H9V9 463 aa12.36□□□□□ -0.43
USP22-208ENST00000578446 RBM27Q9P2N5 1060 aaKnown RBP12.36□□□□□ -0.43
USP22-208ENST00000578446 THSD7BQ9C0I4 1608 aa12.36□□□□□ -0.43
USP22-208ENST00000578446 ZBTB5O15062 677 aa12.35□□□□□ -0.43
USP22-208ENST00000578446 FMNL1O95466 1100 aaPredicted RBP12.35□□□□□ -0.43
USP22-208ENST00000578446 FDX1P10109 184 aa12.35□□□□□ -0.43
USP22-208ENST00000578446 GCLCP48506 637 aaPredicted RBP12.35□□□□□ -0.43
USP22-208ENST00000578446 SSRP1Q08945 709 aaKnown RBP12.35□□□□□ -0.43
USP22-208ENST00000578446 NTRK3Q16288 839 aa12.35□□□□□ -0.43
USP22-208ENST00000578446 LBX2Q6XYB7 198 aa12.35□□□□□ -0.43
USP22-208ENST00000578446 PIGSQ96S52 555 aa12.35□□□□□ -0.43
USP22-208ENST00000578446 LLPHQ9BRT6 129 aaKnown RBP12.35□□□□□ -0.43
USP22-208ENST00000578446 RNF26Q9BY78 433 aaPredicted RBP12.35□□□□□ -0.43
USP22-208ENST00000578446 RANBP17Q9H2T7 1088 aaKnown RBP12.35□□□□□ -0.43
USP22-208ENST00000578446 RIOX1Q9H6W3 641 aa12.35□□□□□ -0.43
USP22-208ENST00000578446 SLC38A10Q9HBR0 1119 aa12.35□□□□□ -0.43
USP22-208ENST00000578446 ZFYVE28Q9HCC9 887 aa12.35□□□□□ -0.43
USP22-208ENST00000578446 RBM19Q9Y4C8 960 aaKnown RBP12.35□□□□□ -0.43
USP22-208ENST00000578446 V9GY48 417 aaPredicted RBP12.35□□□□□ -0.43
USP22-208ENST00000578446 PNMA6FA0A0J9YX94 578 aa12.34□□□□□ -0.43
USP22-208ENST00000578446 hCG_1642624A0A1W2PR95 340 aa12.34□□□□□ -0.43
USP22-208ENST00000578446 JAK2O60674 1132 aa12.34□□□□□ -0.43
USP22-208ENST00000578446 CTDNEP1O95476 244 aa12.34□□□□□ -0.43
USP22-208ENST00000578446 CRHR2Q13324 411 aa12.34□□□□□ -0.43
USP22-208ENST00000578446 CUL4AQ13619 759 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms