RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 NDUFB10O96000 172 aa25.15■■□□□ 1.62
TSEN54-205ENST00000578415 KLRC3Q07444 240 aa25.15■■□□□ 1.62
TSEN54-205ENST00000578415 SNRNP48Q6IEG0 339 aaKnown RBP25.15■■□□□ 1.62
TSEN54-205ENST00000578415 STK11IPQ8N1F8 1099 aa25.15■■□□□ 1.62
TSEN54-205ENST00000578415 MSL3Q8N5Y2 521 aaKnown RBP25.15■■□□□ 1.62
TSEN54-205ENST00000578415 MAFAQ8NHW3 353 aaPredicted RBP25.15■■□□□ 1.62
TSEN54-205ENST00000578415 MYLIPQ8WY64 445 aa25.15■■□□□ 1.62
TSEN54-205ENST00000578415 CDH23Q9H251 3354 aa25.15■■□□□ 1.62
TSEN54-205ENST00000578415 SYNRGQ9UMZ2 1314 aa25.14■■□□□ 1.62
TSEN54-205ENST00000578415 DNAJC25-GNG10A0A024R161 153 aa25.14■■□□□ 1.62
TSEN54-205ENST00000578415 RAG1P15918 1043 aa25.14■■□□□ 1.62
TSEN54-205ENST00000578415 KLHDC9Q8NEP7 349 aa25.14■■□□□ 1.62
TSEN54-205ENST00000578415 RNPC3Q96LT9 517 aaKnown RBP25.14■■□□□ 1.62
TSEN54-205ENST00000578415 TSEN34Q9BSV6 310 aaKnown RBP25.14■■□□□ 1.62
TSEN54-205ENST00000578415 CHMP4BQ9H444 224 aaKnown RBP25.14■■□□□ 1.62
TSEN54-205ENST00000578415 PLXNA1Q9UIW2 1896 aa25.14■■□□□ 1.61
TSEN54-205ENST00000578415 MYH7P12883 1935 aa25.14■■□□□ 1.61
TSEN54-205ENST00000578415 SYNGAP1Q96PV0 1343 aa25.13■■□□□ 1.61
TSEN54-205ENST00000578415 ACLYP53396 1101 aa25.13■■□□□ 1.61
TSEN54-205ENST00000578415 FAAP100Q0VG06 881 aa25.13■■□□□ 1.61
TSEN54-205ENST00000578415 CCSAPQ6IQ19 270 aaPredicted RBP25.13■■□□□ 1.61
TSEN54-205ENST00000578415 GIMAP6Q6P9H5 292 aa25.13■■□□□ 1.61
TSEN54-205ENST00000578415 MAMDC4Q6UXC1 1216 aa25.13■■□□□ 1.61
TSEN54-205ENST00000578415 ANKRD33Q7Z3H0 272 aa25.13■■□□□ 1.61
TSEN54-205ENST00000578415 OSBP2Q969R2 916 aa25.13■■□□□ 1.61
TSEN54-205ENST00000578415 TMEM39AQ9NV64 488 aa25.13■■□□□ 1.61
TSEN54-205ENST00000578415 VCANP13611 3396 aa25.13■■□□□ 1.61
TSEN54-205ENST00000578415 IGKV6D-41A0A0C4DH26 115 aa25.12■■□□□ 1.61
TSEN54-205ENST00000578415 ATP2A1O14983 1001 aa25.12■■□□□ 1.61
TSEN54-205ENST00000578415 KBTBD3Q8NAB2 608 aa25.12■■□□□ 1.61
TSEN54-205ENST00000578415 PRPF38AQ8NAV1 312 aaKnown RBP25.12■■□□□ 1.61
TSEN54-205ENST00000578415 DDX11Q96FC9 970 aa25.12■■□□□ 1.61
TSEN54-205ENST00000578415 TOX2Q96NM4 488 aa25.12■■□□□ 1.61
TSEN54-205ENST00000578415 MKNK2Q9HBH9 465 aa25.12■■□□□ 1.61
TSEN54-205ENST00000578415 EPB41L4AQ9HCS5 686 aaPredicted RBP25.12■■□□□ 1.61
TSEN54-205ENST00000578415 STARD7Q9NQZ5 370 aa25.12■■□□□ 1.61
TSEN54-205ENST00000578415 ECHDC1Q9NTX5 307 aa25.12■■□□□ 1.61
TSEN54-205ENST00000578415 FAM184BQ9ULE4 1060 aa25.12■■□□□ 1.61
TSEN54-205ENST00000578415 MYADML2A6NDP7 307 aa25.11■■□□□ 1.61
TSEN54-205ENST00000578415 MINDY4BA8MYZ0 360 aa25.11■■□□□ 1.61
TSEN54-205ENST00000578415 FPGSQ05932 587 aa25.11■■□□□ 1.61
TSEN54-205ENST00000578415 ZHX1Q9UKY1 873 aaPredicted RBP25.11■■□□□ 1.61
TSEN54-205ENST00000578415 MOXD2PA6NHM9 499 aa25.1■■□□□ 1.61
TSEN54-205ENST00000578415 IRX5P78411 483 aaPredicted RBP25.1■■□□□ 1.61
TSEN54-205ENST00000578415 KCNA10Q16322 511 aa25.1■■□□□ 1.61
TSEN54-205ENST00000578415 C20orf194Q5TEA3 1177 aa25.1■■□□□ 1.61
TSEN54-205ENST00000578415 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.1■■□□□ 1.61
TSEN54-205ENST00000578415 ZNF467Q7Z7K2 595 aaPredicted RBP25.1■■□□□ 1.61
TSEN54-205ENST00000578415 CPXCR1Q8N123 301 aa25.1■■□□□ 1.61
TSEN54-205ENST00000578415 APPBP2Q92624 585 aa25.1■■□□□ 1.61
TSEN54-205ENST00000578415 FGD4Q96M96 766 aa25.1■■□□□ 1.61
TSEN54-205ENST00000578415 CLIP2Q9UDT6 1046 aa25.1■■□□□ 1.61
TSEN54-205ENST00000578415 TMEM265A0A087WTH1 108 aa25.09■■□□□ 1.61
TSEN54-205ENST00000578415 DCDC2CA8MYV0 355 aa25.09■■□□□ 1.61
TSEN54-205ENST00000578415 ADCY6O43306 1168 aa25.09■■□□□ 1.61
TSEN54-205ENST00000578415 DUSP11O75319 330 aaKnown RBP25.09■■□□□ 1.61
TSEN54-205ENST00000578415 NUP133Q8WUM0 1156 aa25.09■■□□□ 1.61
TSEN54-205ENST00000578415 RAVER2Q9HCJ3 691 aaKnown RBP25.09■■□□□ 1.61
TSEN54-205ENST00000578415 TBX21Q9UL17 535 aa25.09■■□□□ 1.61
TSEN54-205ENST00000578415 ZBED4O75132 1171 aa25.08■■□□□ 1.61
TSEN54-205ENST00000578415 CST5P28325 142 aaPredicted RBP25.08■■□□□ 1.61
TSEN54-205ENST00000578415 SLC4A3P48751 1232 aa25.08■■□□□ 1.61
TSEN54-205ENST00000578415 TSHZ3Q63HK5 1081 aa25.08■■□□□ 1.61
TSEN54-205ENST00000578415 MKL1Q969V6 931 aa25.08■■□□□ 1.61
TSEN54-205ENST00000578415 KIFC2Q96AC6 838 aa25.08■■□□□ 1.61
TSEN54-205ENST00000578415 CEP95Q96GE4 821 aa25.08■■□□□ 1.61
TSEN54-205ENST00000578415 SLC38A10Q9HBR0 1119 aa25.08■■□□□ 1.61
TSEN54-205ENST00000578415 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.08■■□□□ 1.61
TSEN54-205ENST00000578415 RNF113AO15541 343 aaKnown RBP25.07■■□□□ 1.6
TSEN54-205ENST00000578415 GPAA1O43292 621 aa25.07■■□□□ 1.6
TSEN54-205ENST00000578415 PRDM1O75626 825 aa25.07■■□□□ 1.6
TSEN54-205ENST00000578415 FOSL2P15408 326 aa25.07■■□□□ 1.6
TSEN54-205ENST00000578415 ACVR2BQ13705 512 aa25.07■■□□□ 1.6
TSEN54-205ENST00000578415 MTMR4Q9NYA4 1195 aa25.07■■□□□ 1.6
TSEN54-205ENST00000578415 RCAN3Q9UKA8 241 aa25.07■■□□□ 1.6
TSEN54-205ENST00000578415 SPTBN5Q9NRC6 3674 aaKnown RBP25.07■■□□□ 1.6
TSEN54-205ENST00000578415 PRUNE2Q8WUY3 3088 aa25.06■■□□□ 1.6
TSEN54-205ENST00000578415 M0R2C6 588 aa25.06■■□□□ 1.6
TSEN54-205ENST00000578415 DIEXFQ68CQ4 756 aaKnown RBP25.06■■□□□ 1.6
TSEN54-205ENST00000578415 LRRC47Q8N1G4 583 aaKnown RBP25.06■■□□□ 1.6
TSEN54-205ENST00000578415 FEM1BQ9UK73 627 aa25.06■■□□□ 1.6
TSEN54-205ENST00000578415 ELP1O95163 1332 aa25.06■■□□□ 1.6
TSEN54-205ENST00000578415 TIMP1P01033 207 aa25.05■■□□□ 1.6
TSEN54-205ENST00000578415 C6orf222P0C671 652 aaPredicted RBP25.05■■□□□ 1.6
TSEN54-205ENST00000578415 TDO2P48775 406 aa25.05■■□□□ 1.6
TSEN54-205ENST00000578415 CDK7P50613 346 aa25.05■■□□□ 1.6
TSEN54-205ENST00000578415 ZNF444Q8N0Y2 327 aaPredicted RBP25.05■■□□□ 1.6
TSEN54-205ENST00000578415 ANKRD35Q8N283 1001 aa25.05■■□□□ 1.6
TSEN54-205ENST00000578415 GMCL1P1Q8NEA9 526 aa25.05■■□□□ 1.6
TSEN54-205ENST00000578415 GLT1D1Q96MS3 346 aa25.05■■□□□ 1.6
TSEN54-205ENST00000578415 UPF3AQ9H1J1 476 aaKnown RBP25.05■■□□□ 1.6
TSEN54-205ENST00000578415 SYNPO2Q9UMS6 1093 aa25.05■■□□□ 1.6
TSEN54-205ENST00000578415 CTDP1Q9Y5B0 961 aaPredicted RBP25.05■■□□□ 1.6
TSEN54-205ENST00000578415 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.04■■□□□ 1.6
TSEN54-205ENST00000578415 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.04■■□□□ 1.6
TSEN54-205ENST00000578415 DNAJB2P25686 324 aa25.04■■□□□ 1.6
TSEN54-205ENST00000578415 GRIN2CQ14957 1233 aa25.04■■□□□ 1.6
TSEN54-205ENST00000578415 CCDC144BQ3MJ40 725 aa25.04■■□□□ 1.6
TSEN54-205ENST00000578415 ARMCX2Q7L311 632 aa25.04■■□□□ 1.6
TSEN54-205ENST00000578415 CHST13Q8NET6 341 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms