RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 WDR78Q5VTH9 848 aa9.27□□□□□ -0.93
CCDC40-215ENST00000576033 LBX2Q6XYB7 198 aa9.27□□□□□ -0.93
CCDC40-215ENST00000576033 IQCA1Q86XH1 822 aa9.27□□□□□ -0.93
CCDC40-215ENST00000576033 CPXCR1Q8N123 301 aa9.27□□□□□ -0.93
CCDC40-215ENST00000576033 PIBF1Q8WXW3 757 aa9.27□□□□□ -0.93
CCDC40-215ENST00000576033 GMCL1Q96IK5 515 aa9.27□□□□□ -0.93
CCDC40-215ENST00000576033 NEK1Q96PY6 1258 aa9.27□□□□□ -0.93
CCDC40-215ENST00000576033 MOV10L1Q9BXT6 1211 aaKnown RBP9.27□□□□□ -0.93
CCDC40-215ENST00000576033 ZNF214Q9UL59 606 aaPredicted RBP9.27□□□□□ -0.93
CCDC40-215ENST00000576033 BRPF3Q9ULD4 1205 aa9.27□□□□□ -0.93
CCDC40-215ENST00000576033 PRR12Q9ULL5 1215 aa9.27□□□□□ -0.93
CCDC40-215ENST00000576033 RIPK3Q9Y572 518 aa9.27□□□□□ -0.93
CCDC40-215ENST00000576033 PTCH2Q9Y6C5 1203 aa9.27□□□□□ -0.93
CCDC40-215ENST00000576033 DDX49Q9Y6V7 483 aaKnown RBP9.27□□□□□ -0.93
CCDC40-215ENST00000576033 ZNF536O15090 1300 aa9.27□□□□□ -0.93
CCDC40-215ENST00000576033 FRMPD3Q5JV73 1810 aa9.26□□□□□ -0.93
CCDC40-215ENST00000576033 PPFIA3O75145 1194 aa9.26□□□□□ -0.93
CCDC40-215ENST00000576033 PLEKHA8P1O95397 391 aa9.26□□□□□ -0.93
CCDC40-215ENST00000576033 FMNL1O95466 1100 aaPredicted RBP9.26□□□□□ -0.93
CCDC40-215ENST00000576033 ELNP15502 786 aa9.26□□□□□ -0.93
CCDC40-215ENST00000576033 CASTP20810 708 aaKnown RBP9.26□□□□□ -0.93
CCDC40-215ENST00000576033 MCM5P33992 734 aa9.26□□□□□ -0.93
CCDC40-215ENST00000576033 STAT2P52630 851 aa9.26□□□□□ -0.93
CCDC40-215ENST00000576033 EXOSC10Q01780 885 aaKnown RBP9.26□□□□□ -0.93
CCDC40-215ENST00000576033 APOBRQ0VD83 1088 aa9.26□□□□□ -0.93
CCDC40-215ENST00000576033 TRIM32Q13049 653 aa9.26□□□□□ -0.93
CCDC40-215ENST00000576033 COG2Q14746 738 aa9.26□□□□□ -0.93
CCDC40-215ENST00000576033 CTU1Q7Z7A3 348 aaKnown RBP9.26□□□□□ -0.93
CCDC40-215ENST00000576033 ZNF654Q8IZM8 581 aa9.26□□□□□ -0.93
CCDC40-215ENST00000576033 SH3TC2Q8TF17 1288 aa9.26□□□□□ -0.93
CCDC40-215ENST00000576033 NUP133Q8WUM0 1156 aa9.26□□□□□ -0.93
CCDC40-215ENST00000576033 DCAF4Q8WV16 495 aa9.26□□□□□ -0.93
CCDC40-215ENST00000576033 ANKS1AQ92625 1134 aa9.26□□□□□ -0.93
CCDC40-215ENST00000576033 AGBL1Q96MI9 1066 aa9.26□□□□□ -0.93
CCDC40-215ENST00000576033 SPATC1LQ9H0A9 340 aa9.26□□□□□ -0.93
CCDC40-215ENST00000576033 HOMER2Q9NSB8 354 aa9.26□□□□□ -0.93
CCDC40-215ENST00000576033 MAD2L2Q9UI95 211 aa9.26□□□□□ -0.93
CCDC40-215ENST00000576033 MCM3APO60318 1980 aa9.26□□□□□ -0.93
CCDC40-215ENST00000576033 MYPNQ86TC9 1320 aa9.26□□□□□ -0.93
CCDC40-215ENST00000576033 hCG_1642624A0A1W2PR95 340 aa9.25□□□□□ -0.93
CCDC40-215ENST00000576033 TNPO2O14787 897 aaKnown RBP9.25□□□□□ -0.93
CCDC40-215ENST00000576033 EIF5BO60841 1220 aaKnown RBP9.25□□□□□ -0.93
CCDC40-215ENST00000576033 PPP1R11O60927 126 aaPredicted RBP9.25□□□□□ -0.93
CCDC40-215ENST00000576033 ERCC3P19447 782 aa9.25□□□□□ -0.93
CCDC40-215ENST00000576033 RPS6KB1P23443 525 aa9.25□□□□□ -0.93
CCDC40-215ENST00000576033 GCLCP48506 637 aaPredicted RBP9.25□□□□□ -0.93
CCDC40-215ENST00000576033 TROAPQ12815 778 aa9.25□□□□□ -0.93
CCDC40-215ENST00000576033 CCL14Q16627 93 aa9.25□□□□□ -0.93
CCDC40-215ENST00000576033 NOM1Q5C9Z4 860 aaKnown RBP9.25□□□□□ -0.93
CCDC40-215ENST00000576033 MUM1L1Q5H9M0 696 aa9.25□□□□□ -0.93
CCDC40-215ENST00000576033 SYDE2Q5VT97 1194 aa9.25□□□□□ -0.93
CCDC40-215ENST00000576033 RNF20Q5VTR2 975 aa9.25□□□□□ -0.93
CCDC40-215ENST00000576033 SNRNP48Q6IEG0 339 aaKnown RBP9.25□□□□□ -0.93
CCDC40-215ENST00000576033 Q6ZUG5 572 aa9.25□□□□□ -0.93
CCDC40-215ENST00000576033 NOL8Q76FK4 1167 aaKnown RBP9.25□□□□□ -0.93
CCDC40-215ENST00000576033 GPR142Q7Z601 462 aa9.25□□□□□ -0.93
CCDC40-215ENST00000576033 MICU3Q86XE3 530 aa9.25□□□□□ -0.93
CCDC40-215ENST00000576033 DGKHQ86XP1 1220 aa9.25□□□□□ -0.93
CCDC40-215ENST00000576033 GPRC5AQ8NFJ5 357 aa9.25□□□□□ -0.93
CCDC40-215ENST00000576033 ERO1AQ96HE7 468 aa9.25□□□□□ -0.93
CCDC40-215ENST00000576033 PURBQ96QR8 312 aaKnown RBP9.25□□□□□ -0.93
CCDC40-215ENST00000576033 SLC38A10Q9HBR0 1119 aa9.25□□□□□ -0.93
CCDC40-215ENST00000576033 FLRT1Q9NZU1 646 aa9.25□□□□□ -0.93
CCDC40-215ENST00000576033 FEM1BQ9UK73 627 aa9.25□□□□□ -0.93
CCDC40-215ENST00000576033 ADAMTS5Q9UNA0 930 aa9.25□□□□□ -0.93
CCDC40-215ENST00000576033 CYTH3O43739 400 aa9.24□□□□□ -0.93
CCDC40-215ENST00000576033 LARGE1O95461 756 aa9.24□□□□□ -0.93
CCDC40-215ENST00000576033 PGK2P07205 417 aa9.24□□□□□ -0.93
CCDC40-215ENST00000576033 ZKSCAN1P17029 563 aaPredicted RBP9.24□□□□□ -0.93
CCDC40-215ENST00000576033 FLT3LGP49771 235 aa9.24□□□□□ -0.93
CCDC40-215ENST00000576033 FCGRTP55899 365 aa9.24□□□□□ -0.93
CCDC40-215ENST00000576033 TOB2Q14106 344 aaPredicted RBP9.24□□□□□ -0.93
CCDC40-215ENST00000576033 GRM4Q14833 912 aa9.24□□□□□ -0.93
CCDC40-215ENST00000576033 TSGA10IPQ3SY00 556 aa9.24□□□□□ -0.93
CCDC40-215ENST00000576033 NFXL1Q6ZNB6 911 aa9.24□□□□□ -0.93
CCDC40-215ENST00000576033 NCAPG2Q86XI2 1143 aa9.24□□□□□ -0.93
CCDC40-215ENST00000576033 ADGRF4Q8IZF3 695 aa9.24□□□□□ -0.93
CCDC40-215ENST00000576033 BRF1Q92994 677 aa9.24□□□□□ -0.93
CCDC40-215ENST00000576033 RANBP17Q9H2T7 1088 aaKnown RBP9.24□□□□□ -0.93
CCDC40-215ENST00000576033 UPF2Q9HAU5 1272 aaKnown RBP9.24□□□□□ -0.93
CCDC40-215ENST00000576033 VAT1LQ9HCJ6 419 aa9.24□□□□□ -0.93
CCDC40-215ENST00000576033 NAP1L2Q9ULW6 460 aaPredicted RBP9.24□□□□□ -0.93
CCDC40-215ENST00000576033 SYNPO2Q9UMS6 1093 aa9.24□□□□□ -0.93
CCDC40-215ENST00000576033 HPS5Q9UPZ3 1129 aa9.24□□□□□ -0.93
CCDC40-215ENST00000576033 PTPN22Q9Y2R2 807 aa9.24□□□□□ -0.93
CCDC40-215ENST00000576033 RABGAP1Q9Y3P9 1069 aa9.24□□□□□ -0.93
CCDC40-215ENST00000576033 KLF18A0A0U1RQI7 1052 aa9.23□□□□□ -0.93
CCDC40-215ENST00000576033 ERICH2A1L162 156 aa9.23□□□□□ -0.93
CCDC40-215ENST00000576033 GOLGA8BA8MQT2 603 aa9.23□□□□□ -0.93
CCDC40-215ENST00000576033 NFIBO00712 420 aa9.23□□□□□ -0.93
CCDC40-215ENST00000576033 CAPN15O75808 1086 aa9.23□□□□□ -0.93
CCDC40-215ENST00000576033 PARP1P09874 1014 aaKnown RBP9.23□□□□□ -0.93
CCDC40-215ENST00000576033 CYP2B6P20813 491 aa9.23□□□□□ -0.93
CCDC40-215ENST00000576033 CDC27P30260 824 aa9.23□□□□□ -0.93
CCDC40-215ENST00000576033 CDC37Q16543 378 aaPredicted RBP9.23□□□□□ -0.93
CCDC40-215ENST00000576033 USH1GQ495M9 461 aa9.23□□□□□ -0.93
CCDC40-215ENST00000576033 APOA5Q6Q788 366 aa9.23□□□□□ -0.93
CCDC40-215ENST00000576033 BLOC1S2Q6QNY1 142 aa9.23□□□□□ -0.93
CCDC40-215ENST00000576033 BTNL9Q6UXG8 535 aa9.23□□□□□ -0.93
CCDC40-215ENST00000576033 DHX32Q7L7V1 743 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms