RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 ADAMTS5Q9UNA0 930 aa19.71■□□□□ 0.75
CTDNEP1-211ENST00000575783 VWA5AO00534 786 aa19.7■□□□□ 0.74
CTDNEP1-211ENST00000575783 IPO8O15397 1037 aaKnown RBP19.7■□□□□ 0.74
CTDNEP1-211ENST00000575783 TLR3O15455 904 aaKnown RBP19.7■□□□□ 0.74
CTDNEP1-211ENST00000575783 DUSP11O75319 330 aaKnown RBP19.7■□□□□ 0.74
CTDNEP1-211ENST00000575783 TRIM27P14373 513 aa19.7■□□□□ 0.74
CTDNEP1-211ENST00000575783 KCNQ1P51787 676 aa19.7■□□□□ 0.74
CTDNEP1-211ENST00000575783 PCSK9Q8NBP7 692 aaKnown RBP19.7■□□□□ 0.74
CTDNEP1-211ENST00000575783 SSH3Q8TE77 659 aa19.7■□□□□ 0.74
CTDNEP1-211ENST00000575783 SDR42E1Q8WUS8 393 aa19.7■□□□□ 0.74
CTDNEP1-211ENST00000575783 HERVK_113Q902F9 699 aa19.7■□□□□ 0.74
CTDNEP1-211ENST00000575783 FRAT1Q92837 279 aaPredicted RBP19.7■□□□□ 0.74
CTDNEP1-211ENST00000575783 DDX11Q96FC9 970 aa19.7■□□□□ 0.74
CTDNEP1-211ENST00000575783 MTIF3Q9H2K0 278 aaKnown RBP19.7■□□□□ 0.74
CTDNEP1-211ENST00000575783 SPC25Q9HBM1 224 aa19.7■□□□□ 0.74
CTDNEP1-211ENST00000575783 A0A0U1RQG5 324 aaPredicted RBP19.69■□□□□ 0.74
CTDNEP1-211ENST00000575783 SLC4A3P48751 1232 aa19.69■□□□□ 0.74
CTDNEP1-211ENST00000575783 RABGGTBP53611 331 aa19.69■□□□□ 0.74
CTDNEP1-211ENST00000575783 ATP8B2P98198 1209 aa19.69■□□□□ 0.74
CTDNEP1-211ENST00000575783 AAK1Q2M2I8 961 aa19.69■□□□□ 0.74
CTDNEP1-211ENST00000575783 GNASQ5JWF2 1037 aa19.69■□□□□ 0.74
CTDNEP1-211ENST00000575783 TMED8Q6PL24 325 aaPredicted RBP19.69■□□□□ 0.74
CTDNEP1-211ENST00000575783 OTOP2Q7RTS6 562 aa19.69■□□□□ 0.74
CTDNEP1-211ENST00000575783 SWAP70Q9UH65 585 aa19.69■□□□□ 0.74
CTDNEP1-211ENST00000575783 HCN4Q9Y3Q4 1203 aa19.69■□□□□ 0.74
CTDNEP1-211ENST00000575783 SLC9C2Q5TAH2 1124 aa19.68■□□□□ 0.74
CTDNEP1-211ENST00000575783 FAM126BQ8IXS8 530 aa19.68■□□□□ 0.74
CTDNEP1-211ENST00000575783 MSL3Q8N5Y2 521 aaKnown RBP19.68■□□□□ 0.74
CTDNEP1-211ENST00000575783 LRFN3Q9BTN0 628 aa19.68■□□□□ 0.74
CTDNEP1-211ENST00000575783 EPHX3Q9H6B9 360 aa19.68■□□□□ 0.74
CTDNEP1-211ENST00000575783 DCP1AQ9NPI6 582 aaPredicted RBP19.68■□□□□ 0.74
CTDNEP1-211ENST00000575783 ZNF214Q9UL59 606 aaPredicted RBP19.68■□□□□ 0.74
CTDNEP1-211ENST00000575783 PPP1R9AQ9ULJ8 1098 aa19.68■□□□□ 0.74
CTDNEP1-211ENST00000575783 MYO5AQ9Y4I1 1855 aaKnown RBP19.68■□□□□ 0.74
CTDNEP1-211ENST00000575783 SYNGAP1Q96PV0 1343 aa19.68■□□□□ 0.74
CTDNEP1-211ENST00000575783 A0A0G2JMZ2 1700 aa19.68■□□□□ 0.74
CTDNEP1-211ENST00000575783 EEF2P13639 858 aaKnown RBP19.67■□□□□ 0.74
CTDNEP1-211ENST00000575783 CST5P28325 142 aaPredicted RBP19.67■□□□□ 0.74
CTDNEP1-211ENST00000575783 COPB2P35606 906 aa19.67■□□□□ 0.74
CTDNEP1-211ENST00000575783 ACVR2BQ13705 512 aa19.67■□□□□ 0.74
CTDNEP1-211ENST00000575783 PPP2R2DQ66LE6 453 aa19.67■□□□□ 0.74
CTDNEP1-211ENST00000575783 C1orf115Q9H7X2 142 aa19.67■□□□□ 0.74
CTDNEP1-211ENST00000575783 PLXNA1Q9UIW2 1896 aa19.67■□□□□ 0.74
CTDNEP1-211ENST00000575783 MYOGP15173 224 aa19.66■□□□□ 0.74
CTDNEP1-211ENST00000575783 PDE6AP16499 860 aa19.66■□□□□ 0.74
CTDNEP1-211ENST00000575783 FAM83BQ5T0W9 1011 aa19.66■□□□□ 0.74
CTDNEP1-211ENST00000575783 MAMDC4Q6UXC1 1216 aa19.66■□□□□ 0.74
CTDNEP1-211ENST00000575783 MYO9BQ13459 2157 aa19.66■□□□□ 0.74
CTDNEP1-211ENST00000575783 ADCY6O43306 1168 aa19.65■□□□□ 0.74
CTDNEP1-211ENST00000575783 CCL23P55773 120 aa19.65■□□□□ 0.74
CTDNEP1-211ENST00000575783 GJA9P57773 515 aa19.65■□□□□ 0.74
CTDNEP1-211ENST00000575783 CCDC144BQ3MJ40 725 aa19.65■□□□□ 0.74
CTDNEP1-211ENST00000575783 SNRNP48Q6IEG0 339 aaKnown RBP19.65■□□□□ 0.74
CTDNEP1-211ENST00000575783 LCORLQ8N3X6 602 aa19.65■□□□□ 0.74
CTDNEP1-211ENST00000575783 REPS2Q8NFH8 660 aa19.65■□□□□ 0.74
CTDNEP1-211ENST00000575783 CCDC17Q96LX7 622 aa19.65■□□□□ 0.74
CTDNEP1-211ENST00000575783 HIPK3Q9H422 1215 aa19.65■□□□□ 0.74
CTDNEP1-211ENST00000575783 GOPCQ9HD26 462 aa19.65■□□□□ 0.74
CTDNEP1-211ENST00000575783 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.65■□□□□ 0.74
CTDNEP1-211ENST00000575783 NOP58Q9Y2X3 529 aaKnown RBP19.65■□□□□ 0.74
CTDNEP1-211ENST00000575783 RIPK3Q9Y572 518 aa19.65■□□□□ 0.74
CTDNEP1-211ENST00000575783 SLC4A7Q9Y6M7 1214 aa19.65■□□□□ 0.74
CTDNEP1-211ENST00000575783 ZNF532Q9HCE3 1301 aa19.65■□□□□ 0.74
CTDNEP1-211ENST00000575783 CD4P01730 458 aa19.64■□□□□ 0.73
CTDNEP1-211ENST00000575783 TEX13BQ9BXU2 312 aa19.64■□□□□ 0.73
CTDNEP1-211ENST00000575783 ARMT1Q9H993 441 aa19.64■□□□□ 0.73
CTDNEP1-211ENST00000575783 ARIH1Q9Y4X5 557 aaPredicted RBP19.64■□□□□ 0.73
CTDNEP1-211ENST00000575783 UMODL1Q5DID0 1318 aa19.64■□□□□ 0.73
CTDNEP1-211ENST00000575783 CYP2D7A0A087X1C5 515 aa19.63■□□□□ 0.73
CTDNEP1-211ENST00000575783 ZBBXA8MT70 800 aa19.63■□□□□ 0.73
CTDNEP1-211ENST00000575783 SMIM22K7EJ46 135 aa19.63■□□□□ 0.73
CTDNEP1-211ENST00000575783 RFXAPO00287 272 aa19.63■□□□□ 0.73
CTDNEP1-211ENST00000575783 ERC2O15083 957 aa19.63■□□□□ 0.73
CTDNEP1-211ENST00000575783 PRKAB2O43741 272 aa19.63■□□□□ 0.73
CTDNEP1-211ENST00000575783 CDK8P49336 464 aa19.63■□□□□ 0.73
CTDNEP1-211ENST00000575783 BEX3Q00994 111 aa19.63■□□□□ 0.73
CTDNEP1-211ENST00000575783 TTF1Q15361 905 aaPredicted RBP19.63■□□□□ 0.73
CTDNEP1-211ENST00000575783 TMEM31Q5JXX7 168 aa19.63■□□□□ 0.73
CTDNEP1-211ENST00000575783 AACSQ86V21 672 aa19.63■□□□□ 0.73
CTDNEP1-211ENST00000575783 TMEM57Q8N5G2 664 aa19.63■□□□□ 0.73
CTDNEP1-211ENST00000575783 UPF3AQ9H1J1 476 aaKnown RBP19.63■□□□□ 0.73
CTDNEP1-211ENST00000575783 ABHD16BQ9H3Z7 469 aa19.63■□□□□ 0.73
CTDNEP1-211ENST00000575783 KANSL2Q9H9L4 492 aa19.63■□□□□ 0.73
CTDNEP1-211ENST00000575783 DNAJC25-GNG10A0A024R161 153 aa19.62■□□□□ 0.73
CTDNEP1-211ENST00000575783 CXCL17Q6UXB2 119 aa19.62■□□□□ 0.73
CTDNEP1-211ENST00000575783 NOL8Q76FK4 1167 aaKnown RBP19.62■□□□□ 0.73
CTDNEP1-211ENST00000575783 CPXCR1Q8N123 301 aa19.62■□□□□ 0.73
CTDNEP1-211ENST00000575783 NUP88Q99567 741 aaPredicted RBP19.62■□□□□ 0.73
CTDNEP1-211ENST00000575783 SLF1Q9BQI6 1058 aa19.62■□□□□ 0.73
CTDNEP1-211ENST00000575783 PCDHA11Q9Y5I1 949 aa19.62■□□□□ 0.73
CTDNEP1-211ENST00000575783 GTPBP6O43824 516 aaPredicted RBP19.61■□□□□ 0.73
CTDNEP1-211ENST00000575783 ZNF467Q7Z7K2 595 aaPredicted RBP19.61■□□□□ 0.73
CTDNEP1-211ENST00000575783 ANKRD35Q8N283 1001 aa19.61■□□□□ 0.73
CTDNEP1-211ENST00000575783 CERS4Q9HA82 394 aa19.61■□□□□ 0.73
CTDNEP1-211ENST00000575783 CTDP1Q9Y5B0 961 aaPredicted RBP19.61■□□□□ 0.73
CTDNEP1-211ENST00000575783 TCF20Q9UGU0 1960 aaKnown RBP19.61■□□□□ 0.73
CTDNEP1-211ENST00000575783 ZNFX1Q9P2E3 1918 aaKnown RBP19.61■□□□□ 0.73
CTDNEP1-211ENST00000575783 TRANK1O15050 2925 aa19.6■□□□□ 0.73
CTDNEP1-211ENST00000575783 GOLIM4O00461 696 aa19.6■□□□□ 0.73
CTDNEP1-211ENST00000575783 CTAGE5O15320 804 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms