RNA–Protein interactions for RNA: ENST00000575338.1

SMG6-217, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-217ENST00000575338 NEK8Q86SG6 692 aa7.72□□□□□ -1.17
SMG6-217ENST00000575338 CCDC125Q86Z20 511 aa7.72□□□□□ -1.17
SMG6-217ENST00000575338 ZSCAN29Q8IWY8 852 aaPredicted RBP7.72□□□□□ -1.17
SMG6-217ENST00000575338 CERS5Q8N5B7 392 aa7.72□□□□□ -1.17
SMG6-217ENST00000575338 SLC44A5Q8NCS7 719 aa7.72□□□□□ -1.17
SMG6-217ENST00000575338 ANKRD20A12PQ8NF67 263 aa7.72□□□□□ -1.17
SMG6-217ENST00000575338 RASSF8Q8NHQ8 419 aa7.72□□□□□ -1.17
SMG6-217ENST00000575338 MKL1Q969V6 931 aa7.72□□□□□ -1.17
SMG6-217ENST00000575338 CTAGE1Q96RT6 745 aa7.72□□□□□ -1.17
SMG6-217ENST00000575338 LRRC27Q9C0I9 530 aa7.72□□□□□ -1.17
SMG6-217ENST00000575338 DBNDD1Q9H9R9 158 aa7.72□□□□□ -1.17
SMG6-217ENST00000575338 NYAP2Q9P242 653 aa7.72□□□□□ -1.17
SMG6-217ENST00000575338 HERC5Q9UII4 1024 aaKnown RBP7.72□□□□□ -1.17
SMG6-217ENST00000575338 PCDHA5Q9Y5H7 936 aa7.72□□□□□ -1.17
SMG6-217ENST00000575338 STK24Q9Y6E0 443 aa7.72□□□□□ -1.17
SMG6-217ENST00000575338 PNMA6FA0A0J9YX94 578 aa7.71□□□□□ -1.18
SMG6-217ENST00000575338 UBE2Q2LH0YL09 131 aa7.71□□□□□ -1.18
SMG6-217ENST00000575338 M0R2N6 131 aa7.71□□□□□ -1.18
SMG6-217ENST00000575338 ACTN4O43707 911 aaKnown RBP7.71□□□□□ -1.18
SMG6-217ENST00000575338 SERPINC1P01008 464 aa7.71□□□□□ -1.18
SMG6-217ENST00000575338 TUBB4AP04350 444 aa7.71□□□□□ -1.18
SMG6-217ENST00000575338 TPM2P07951 284 aa7.71□□□□□ -1.18
SMG6-217ENST00000575338 GCFC2P16383 781 aaKnown RBP7.71□□□□□ -1.18
SMG6-217ENST00000575338 MCM7P33993 719 aa7.71□□□□□ -1.18
SMG6-217ENST00000575338 SARSP49591 514 aaKnown RBP7.71□□□□□ -1.18
SMG6-217ENST00000575338 SCNN1DP51172 638 aa7.71□□□□□ -1.18
SMG6-217ENST00000575338 ADCY7P51828 1080 aa7.71□□□□□ -1.18
SMG6-217ENST00000575338 AMPD3Q01432 767 aa7.71□□□□□ -1.18
SMG6-217ENST00000575338 ZNF543Q08ER8 600 aa7.71□□□□□ -1.18
SMG6-217ENST00000575338 PNOCQ13519 176 aa7.71□□□□□ -1.18
SMG6-217ENST00000575338 STIM1Q13586 685 aa7.71□□□□□ -1.18
SMG6-217ENST00000575338 ZNF174Q15697 407 aa7.71□□□□□ -1.18
SMG6-217ENST00000575338 NPY5RQ15761 445 aa7.71□□□□□ -1.18
SMG6-217ENST00000575338 EZH2Q15910 746 aaKnown RBP7.71□□□□□ -1.18
SMG6-217ENST00000575338 CERKLQ49MI3 558 aaPredicted RBP7.71□□□□□ -1.18
SMG6-217ENST00000575338 CCDC186Q7Z3E2 898 aa7.71□□□□□ -1.18
SMG6-217ENST00000575338 METTL16Q86W50 562 aaKnown RBP7.71□□□□□ -1.18
SMG6-217ENST00000575338 KIAA0825Q8IV33 1275 aa7.71□□□□□ -1.18
SMG6-217ENST00000575338 STAG2Q8N3U4 1231 aa7.71□□□□□ -1.18
SMG6-217ENST00000575338 SPC24Q8NBT2 197 aa7.71□□□□□ -1.18
SMG6-217ENST00000575338 CCDC112Q8NEF3 446 aa7.71□□□□□ -1.18
SMG6-217ENST00000575338 SPATA20Q8TB22 786 aa7.71□□□□□ -1.18
SMG6-217ENST00000575338 ENOX1Q8TC92 643 aaKnown RBP7.71□□□□□ -1.18
SMG6-217ENST00000575338 SYMPKQ92797 1274 aaKnown RBP7.71□□□□□ -1.18
SMG6-217ENST00000575338 CUL5Q93034 780 aa7.71□□□□□ -1.18
SMG6-217ENST00000575338 CCSER1Q9C0I3 900 aa7.71□□□□□ -1.18
SMG6-217ENST00000575338 SH2D4AQ9H788 454 aa7.71□□□□□ -1.18
SMG6-217ENST00000575338 SERTAD1Q9UHV2 236 aa7.71□□□□□ -1.18
SMG6-217ENST00000575338 PCDHA6Q9UN73 950 aa7.71□□□□□ -1.18
SMG6-217ENST00000575338 PCDHA8Q9Y5H6 950 aa7.71□□□□□ -1.18
SMG6-217ENST00000575338 LOXHD1Q8IVV2 1947 aa7.71□□□□□ -1.18
SMG6-217ENST00000575338 FER1L6Q2WGJ9 1857 aa7.7□□□□□ -1.18
SMG6-217ENST00000575338 hCG_1642624A0A1W2PR95 340 aa7.7□□□□□ -1.18
SMG6-217ENST00000575338 KIF2AO00139 706 aaPredicted RBP7.7□□□□□ -1.18
SMG6-217ENST00000575338 BIN1O00499 593 aa7.7□□□□□ -1.18
SMG6-217ENST00000575338 CYTH3O43739 400 aa7.7□□□□□ -1.18
SMG6-217ENST00000575338 GTPBP6O43824 516 aaPredicted RBP7.7□□□□□ -1.18
SMG6-217ENST00000575338 OR52Z1P0C646 297 aa7.7□□□□□ -1.18
SMG6-217ENST00000575338 AKR1B1P15121 316 aa7.7□□□□□ -1.18
SMG6-217ENST00000575338 CDK11BP21127 795 aaKnown RBP7.7□□□□□ -1.18
SMG6-217ENST00000575338 POLD1P28340 1107 aa7.7□□□□□ -1.18
SMG6-217ENST00000575338 SHMT1P34896 483 aa7.7□□□□□ -1.18
SMG6-217ENST00000575338 STAT6P42226 847 aa7.7□□□□□ -1.18
SMG6-217ENST00000575338 KCNJ6P48051 423 aa7.7□□□□□ -1.18
SMG6-217ENST00000575338 TGFB2P61812 414 aa7.7□□□□□ -1.18
SMG6-217ENST00000575338 MDM2Q00987 491 aaPredicted RBP7.7□□□□□ -1.18
SMG6-217ENST00000575338 EVX2Q03828 476 aa7.7□□□□□ -1.18
SMG6-217ENST00000575338 EN1Q05925 392 aaPredicted RBP7.7□□□□□ -1.18
SMG6-217ENST00000575338 SPAG1Q07617 926 aa7.7□□□□□ -1.18
SMG6-217ENST00000575338 MORC3Q14149 939 aa7.7□□□□□ -1.18
SMG6-217ENST00000575338 NOLC1Q14978 699 aaKnown RBP eCLIP7.7□□□□□ -1.18
SMG6-217ENST00000575338 CCDC96Q2M329 555 aa7.7□□□□□ -1.18
SMG6-217ENST00000575338 FILIP1LQ4L180 1135 aa7.7□□□□□ -1.18
SMG6-217ENST00000575338 RBM26Q5T8P6 1007 aaKnown RBP7.7□□□□□ -1.18
SMG6-217ENST00000575338 FKBP1CQ5VVH2 108 aa7.7□□□□□ -1.18
SMG6-217ENST00000575338 TATDN1Q6P1N9 297 aa7.7□□□□□ -1.18
SMG6-217ENST00000575338 USP17L2Q6R6M4 530 aa7.7□□□□□ -1.18
SMG6-217ENST00000575338 HOMER1Q86YM7 354 aa7.7□□□□□ -1.18
SMG6-217ENST00000575338 AGBL3Q8NEM8 1001 aa7.7□□□□□ -1.18
SMG6-217ENST00000575338 C7orf43Q8WVR3 580 aa7.7□□□□□ -1.18
SMG6-217ENST00000575338 GPKOWQ92917 476 aaPredicted RBP eCLIP7.7□□□□□ -1.18
SMG6-217ENST00000575338 DHX58Q96C10 678 aa7.7□□□□□ -1.18
SMG6-217ENST00000575338 CALML4Q96GE6 196 aa7.7□□□□□ -1.18
SMG6-217ENST00000575338 PRIMPOLQ96LW4 560 aa7.7□□□□□ -1.18
SMG6-217ENST00000575338 NAP1L5Q96NT1 182 aaPredicted RBP7.7□□□□□ -1.18
SMG6-217ENST00000575338 ARHGEF10LQ9HCE6 1279 aa7.7□□□□□ -1.18
SMG6-217ENST00000575338 MAN1B1Q9UKM7 699 aa7.7□□□□□ -1.18
SMG6-217ENST00000575338 MTMR7Q9Y216 660 aa7.7□□□□□ -1.18
SMG6-217ENST00000575338 BRCA1P38398 1863 aaKnown RBP7.7□□□□□ -1.18
SMG6-217ENST00000575338 MYH7BA7E2Y1 1941 aa7.7□□□□□ -1.18
SMG6-217ENST00000575338 ATAD5Q96QE3 1844 aa7.69□□□□□ -1.18
SMG6-217ENST00000575338 USP17L5A8MUK1 530 aa7.69□□□□□ -1.18
SMG6-217ENST00000575338 ZBTB5O15062 677 aa7.69□□□□□ -1.18
SMG6-217ENST00000575338 TPM1P09493 284 aa7.69□□□□□ -1.18
SMG6-217ENST00000575338 SFPQP23246 707 aaKnown RBP eCLIP7.69□□□□□ -1.18
SMG6-217ENST00000575338 SLC1A4P43007 532 aa7.69□□□□□ -1.18
SMG6-217ENST00000575338 TNNI2P48788 182 aa7.69□□□□□ -1.18
SMG6-217ENST00000575338 UBASH3AP57075 661 aa7.69□□□□□ -1.18
SMG6-217ENST00000575338 FANCCQ00597 558 aa7.69□□□□□ -1.18
SMG6-217ENST00000575338 AP3B2Q13367 1082 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms