RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 NECAB2Q7Z6G3 386 aa23.31■■□□□ 1.32
SCARF1-208ENST00000574545 DPF3Q92784 378 aa23.31■■□□□ 1.32
SCARF1-208ENST00000574545 TEX13BQ9BXU2 312 aa23.31■■□□□ 1.32
SCARF1-208ENST00000574545 TCP11L1Q9NUJ3 509 aa23.31■■□□□ 1.32
SCARF1-208ENST00000574545 STX8Q9UNK0 236 aa23.31■■□□□ 1.32
SCARF1-208ENST00000574545 H0YGN5 161 aa23.3■■□□□ 1.32
SCARF1-208ENST00000574545 PLA2G6O60733 806 aa23.3■■□□□ 1.32
SCARF1-208ENST00000574545 CYBAP13498 195 aa23.3■■□□□ 1.32
SCARF1-208ENST00000574545 TTC22Q5TAA0 569 aa23.3■■□□□ 1.32
SCARF1-208ENST00000574545 STAG1Q8WVM7 1258 aa23.3■■□□□ 1.32
SCARF1-208ENST00000574545 KIFC2Q96AC6 838 aa23.3■■□□□ 1.32
SCARF1-208ENST00000574545 MAML3Q96JK9 1138 aa23.3■■□□□ 1.32
SCARF1-208ENST00000574545 IL25Q9H293 177 aa23.3■■□□□ 1.32
SCARF1-208ENST00000574545 DIAPH3Q9NSV4 1193 aa23.3■■□□□ 1.32
SCARF1-208ENST00000574545 SLC5A4Q9NY91 659 aa23.3■■□□□ 1.32
SCARF1-208ENST00000574545 TMEM232C9JQI7 657 aa23.29■■□□□ 1.32
SCARF1-208ENST00000574545 ZBED4O75132 1171 aa23.29■■□□□ 1.32
SCARF1-208ENST00000574545 PCP11498 1178 aaKnown RBP23.29■■□□□ 1.32
SCARF1-208ENST00000574545 MCCP23508 829 aa23.29■■□□□ 1.32
SCARF1-208ENST00000574545 ZNF792Q3KQV3 632 aa23.29■■□□□ 1.32
SCARF1-208ENST00000574545 AKNAD1Q5T1N1 836 aa23.29■■□□□ 1.32
SCARF1-208ENST00000574545 SNRNP48Q6IEG0 339 aaKnown RBP23.29■■□□□ 1.32
SCARF1-208ENST00000574545 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.29■■□□□ 1.32
SCARF1-208ENST00000574545 TBC1D10CQ8IV04 446 aa23.29■■□□□ 1.32
SCARF1-208ENST00000574545 MMP19Q99542 508 aa23.29■■□□□ 1.32
SCARF1-208ENST00000574545 DIS3Q9Y2L1 958 aaKnown RBP23.29■■□□□ 1.32
SCARF1-208ENST00000574545 RCSD1Q6JBY9 416 aa23.28■■□□□ 1.32
SCARF1-208ENST00000574545 RASGRP2Q7LDG7 609 aa23.28■■□□□ 1.32
SCARF1-208ENST00000574545 DSCC1Q9BVC3 393 aa23.28■■□□□ 1.32
SCARF1-208ENST00000574545 RAVER2Q9HCJ3 691 aaKnown RBP23.28■■□□□ 1.32
SCARF1-208ENST00000574545 DDX20Q9UHI6 824 aaKnown RBP23.28■■□□□ 1.32
SCARF1-208ENST00000574545 PGK2P07205 417 aa23.27■■□□□ 1.32
SCARF1-208ENST00000574545 FDX1P10109 184 aa23.27■■□□□ 1.32
SCARF1-208ENST00000574545 COL6A1P12109 1028 aa23.27■■□□□ 1.32
SCARF1-208ENST00000574545 SLC1A4P43007 532 aa23.27■■□□□ 1.32
SCARF1-208ENST00000574545 OAZ1P54368 228 aa23.27■■□□□ 1.32
SCARF1-208ENST00000574545 KCTD2Q14681 263 aa23.27■■□□□ 1.32
SCARF1-208ENST00000574545 RRP12Q5JTH9 1297 aaKnown RBP23.27■■□□□ 1.32
SCARF1-208ENST00000574545 MFSD6Q6ZSS7 791 aa23.27■■□□□ 1.32
SCARF1-208ENST00000574545 CPXCR1Q8N123 301 aa23.27■■□□□ 1.32
SCARF1-208ENST00000574545 CHURC1Q8WUH1 139 aa23.27■■□□□ 1.32
SCARF1-208ENST00000574545 TOMM22Q9NS69 142 aa23.27■■□□□ 1.32
SCARF1-208ENST00000574545 STAT2P52630 851 aa23.26■■□□□ 1.31
SCARF1-208ENST00000574545 KCTD1Q719H9 257 aa23.26■■□□□ 1.31
SCARF1-208ENST00000574545 FAM160B2Q86V87 743 aa23.26■■□□□ 1.31
SCARF1-208ENST00000574545 TMEM47Q9BQJ4 181 aa23.26■■□□□ 1.31
SCARF1-208ENST00000574545 PFASO15067 1338 aa23.26■■□□□ 1.31
SCARF1-208ENST00000574545 ZNF536O15090 1300 aa23.26■■□□□ 1.31
SCARF1-208ENST00000574545 ALPK3Q96L96 1907 aa23.25■■□□□ 1.31
SCARF1-208ENST00000574545 RANBP2P49792 3224 aaKnown RBP23.25■■□□□ 1.31
SCARF1-208ENST00000574545 DNAJC25-GNG10A0A024R161 153 aa23.25■■□□□ 1.31
SCARF1-208ENST00000574545 ZNF213O14771 459 aa23.25■■□□□ 1.31
SCARF1-208ENST00000574545 MSCO60682 206 aa23.25■■□□□ 1.31
SCARF1-208ENST00000574545 PRAMEF19Q5SWL8 479 aa23.25■■□□□ 1.31
SCARF1-208ENST00000574545 RNF41Q9H4P4 317 aaPredicted RBP23.25■■□□□ 1.31
SCARF1-208ENST00000574545 C11orf49Q9H6J7 331 aa23.25■■□□□ 1.31
SCARF1-208ENST00000574545 TOP1P11387 765 aaKnown RBP23.24■■□□□ 1.31
SCARF1-208ENST00000574545 CHMP4CQ96CF2 233 aa23.24■■□□□ 1.31
SCARF1-208ENST00000574545 TTC14Q96N46 770 aa23.24■■□□□ 1.31
SCARF1-208ENST00000574545 TINF2Q9BSI4 451 aa23.24■■□□□ 1.31
SCARF1-208ENST00000574545 NEDD4P46934 1319 aa23.24■■□□□ 1.31
SCARF1-208ENST00000574545 FRMPD3Q5JV73 1810 aa23.24■■□□□ 1.31
SCARF1-208ENST00000574545 SEPT4O43236 478 aa23.23■■□□□ 1.31
SCARF1-208ENST00000574545 CNGA1P29973 690 aa23.23■■□□□ 1.31
SCARF1-208ENST00000574545 CHST13Q8NET6 341 aa23.23■■□□□ 1.31
SCARF1-208ENST00000574545 DCAF4Q8WV16 495 aa23.23■■□□□ 1.31
SCARF1-208ENST00000574545 NRBP1Q9UHY1 535 aa23.23■■□□□ 1.31
SCARF1-208ENST00000574545 NR2E3Q9Y5X4 410 aa23.23■■□□□ 1.31
SCARF1-208ENST00000574545 PLXNA1Q9UIW2 1896 aa23.22■■□□□ 1.31
SCARF1-208ENST00000574545 EVI5O60447 810 aa23.22■■□□□ 1.31
SCARF1-208ENST00000574545 NT5C2P49902 561 aa23.22■■□□□ 1.31
SCARF1-208ENST00000574545 HABP4Q5JVS0 413 aaKnown RBP23.22■■□□□ 1.31
SCARF1-208ENST00000574545 BTNL9Q6UXG8 535 aa23.22■■□□□ 1.31
SCARF1-208ENST00000574545 PRR12Q9ULL5 1215 aa23.22■■□□□ 1.31
SCARF1-208ENST00000574545 COLQQ9Y215 455 aaPredicted RBP23.22■■□□□ 1.31
SCARF1-208ENST00000574545 CTDP1Q9Y5B0 961 aaPredicted RBP23.22■■□□□ 1.31
SCARF1-208ENST00000574545 CHMLP26374 656 aa23.21■■□□□ 1.31
SCARF1-208ENST00000574545 TTBK2Q6IQ55 1244 aa23.21■■□□□ 1.31
SCARF1-208ENST00000574545 MAMDC4Q6UXC1 1216 aa23.21■■□□□ 1.31
SCARF1-208ENST00000574545 ESR2Q92731 530 aa23.21■■□□□ 1.31
SCARF1-208ENST00000574545 FGD4Q96M96 766 aa23.21■■□□□ 1.31
SCARF1-208ENST00000574545 AGBL1Q96MI9 1066 aa23.21■■□□□ 1.31
SCARF1-208ENST00000574545 PRO3102Q9H379 93 aa23.21■■□□□ 1.31
SCARF1-208ENST00000574545 FBXO40Q9UH90 709 aa23.21■■□□□ 1.31
SCARF1-208ENST00000574545 LAMA4Q16363 1823 aa23.21■■□□□ 1.31
SCARF1-208ENST00000574545 SMCHD1A6NHR9 2005 aa23.21■■□□□ 1.31
SCARF1-208ENST00000574545 RAD50Q92878 1312 aa23.2■■□□□ 1.3
SCARF1-208ENST00000574545 SLC34A2O95436 690 aa23.2■■□□□ 1.3
SCARF1-208ENST00000574545 ZNF865P0CJ78 1059 aaPredicted RBP23.2■■□□□ 1.3
SCARF1-208ENST00000574545 SNHG28P0DPA3 235 aa23.2■■□□□ 1.3
SCARF1-208ENST00000574545 SLC4A3P48751 1232 aa23.2■■□□□ 1.3
SCARF1-208ENST00000574545 MSL3Q8N5Y2 521 aaKnown RBP23.2■■□□□ 1.3
SCARF1-208ENST00000574545 DDX11Q96FC9 970 aa23.2■■□□□ 1.3
SCARF1-208ENST00000574545 CTNNA3Q9UI47 895 aa23.2■■□□□ 1.3
SCARF1-208ENST00000574545 MTMR7Q9Y216 660 aa23.2■■□□□ 1.3
SCARF1-208ENST00000574545 PDHBP11177 359 aa23.19■■□□□ 1.3
SCARF1-208ENST00000574545 TAL1P17542 331 aaPredicted RBP23.19■■□□□ 1.3
SCARF1-208ENST00000574545 IKQ13123 557 aaPredicted RBP23.19■■□□□ 1.3
SCARF1-208ENST00000574545 ZNF467Q7Z7K2 595 aaPredicted RBP23.19■■□□□ 1.3
SCARF1-208ENST00000574545 DGKHQ86XP1 1220 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms