RNA–Protein interactions for RNA: ENST00000574049.1

RPA1-207, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 3,849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-207ENST00000574049 MB21D2Q8IYB1 491 aaPredicted RBP8.52□□□□□ -1.05
RPA1-207ENST00000574049 ZSCAN10Q96SZ4 725 aaPredicted RBP8.52□□□□□ -1.05
RPA1-207ENST00000574049 VPS16Q9H269 839 aa8.52□□□□□ -1.05
RPA1-207ENST00000574049 TCP11L1Q9NUJ3 509 aa8.52□□□□□ -1.05
RPA1-207ENST00000574049 CTAGE5O15320 804 aa8.52□□□□□ -1.05
RPA1-207ENST00000574049 CDK8P49336 464 aa8.52□□□□□ -1.05
RPA1-207ENST00000574049 CXCL9Q07325 125 aa8.52□□□□□ -1.05
RPA1-207ENST00000574049 ERCC6LQ2NKX8 1250 aa8.52□□□□□ -1.05
RPA1-207ENST00000574049 UTP14CQ5TAP6 766 aaKnown RBP8.52□□□□□ -1.05
RPA1-207ENST00000574049 CCDC84Q86UT8 332 aaPredicted RBP8.52□□□□□ -1.05
RPA1-207ENST00000574049 ZFPM1Q8IX07 1006 aa8.52□□□□□ -1.05
RPA1-207ENST00000574049 CSRNP1Q96S65 589 aa8.52□□□□□ -1.05
RPA1-207ENST00000574049 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.52□□□□□ -1.051e-6■■■■■ 57.1
RPA1-207ENST00000574049 RSPH14Q9UHP6 348 aa8.52□□□□□ -1.05
RPA1-207ENST00000574049 ZBTB21Q9ULJ3 1066 aa8.52□□□□□ -1.05
RPA1-207ENST00000574049 CLEC11AQ9Y240 323 aa8.52□□□□□ -1.05
RPA1-207ENST00000574049 ZNF202O95125 648 aa8.51□□□□□ -1.05
RPA1-207ENST00000574049 IL1R1P14778 569 aa8.51□□□□□ -1.05
RPA1-207ENST00000574049 PNOCQ13519 176 aa8.51□□□□□ -1.05
RPA1-207ENST00000574049 STRIP1Q5VSL9 837 aa8.51□□□□□ -1.05
RPA1-207ENST00000574049 ANO1Q5XXA6 986 aa8.51□□□□□ -1.05
RPA1-207ENST00000574049 SPICE1Q8N0Z3 855 aa8.51□□□□□ -1.05
RPA1-207ENST00000574049 TMEM87BQ96K49 555 aa8.51□□□□□ -1.05
RPA1-207ENST00000574049 EPC1Q9H2F5 836 aa8.51□□□□□ -1.05
RPA1-207ENST00000574049 ZNF215Q9UL58 517 aaPredicted RBP8.51□□□□□ -1.05
RPA1-207ENST00000574049 ZNRF3Q9ULT6 936 aa8.51□□□□□ -1.05
RPA1-207ENST00000574049 CLIC4Q9Y696 253 aa8.51□□□□□ -1.05
RPA1-207ENST00000574049 FRMPD2Q68DX3 1309 aaPredicted RBP8.51□□□□□ -1.05
RPA1-207ENST00000574049 ANKRD65E5RJM6 399 aa8.51□□□□□ -1.05
RPA1-207ENST00000574049 ZSCAN20P17040 1043 aaPredicted RBP8.51□□□□□ -1.05
RPA1-207ENST00000574049 STAT6P42226 847 aa8.51□□□□□ -1.05
RPA1-207ENST00000574049 SSR1P43307 286 aaKnown RBP8.51□□□□□ -1.05
RPA1-207ENST00000574049 BMS1Q14692 1282 aaKnown RBP8.51□□□□□ -1.05
RPA1-207ENST00000574049 EAPPQ56P03 285 aaPredicted RBP8.51□□□□□ -1.05
RPA1-207ENST00000574049 SH2B2O14492 632 aaPredicted RBP8.51□□□□□ -1.05
RPA1-207ENST00000574049 CDC27P30260 824 aa8.51□□□□□ -1.05
RPA1-207ENST00000574049 ADKP55263 362 aaKnown RBP8.51□□□□□ -1.05
RPA1-207ENST00000574049 ASIC1P78348 528 aa8.51□□□□□ -1.05
RPA1-207ENST00000574049 EXOSC10Q01780 885 aaKnown RBP8.51□□□□□ -1.05
RPA1-207ENST00000574049 TAX1BP1Q86VP1 789 aa8.51□□□□□ -1.05
RPA1-207ENST00000574049 FCHSD1Q86WN1 690 aa8.51□□□□□ -1.05
RPA1-207ENST00000574049 RTFDC1Q9BY42 306 aaPredicted RBP8.51□□□□□ -1.05
RPA1-207ENST00000574049 NBPF3Q9H094 633 aa8.51□□□□□ -1.05
RPA1-207ENST00000574049 ZNF408Q9H9D4 720 aa8.51□□□□□ -1.05
RPA1-207ENST00000574049 RNF181Q9P0P0 153 aa8.51□□□□□ -1.05
RPA1-207ENST00000574049 SERPINB13Q9UIV8 391 aa8.51□□□□□ -1.05
RPA1-207ENST00000574049 TESPA1A2RU30 521 aaPredicted RBP8.5□□□□□ -1.05
RPA1-207ENST00000574049 YDJCA8MPS7 323 aa8.5□□□□□ -1.05
RPA1-207ENST00000574049 TRIM21P19474 475 aaKnown RBP8.5□□□□□ -1.05
RPA1-207ENST00000574049 CASQ1P31415 396 aa8.5□□□□□ -1.05
RPA1-207ENST00000574049 KIF5BP33176 963 aa8.5□□□□□ -1.05
RPA1-207ENST00000574049 ODF2Q5BJF6 829 aa8.5□□□□□ -1.05
RPA1-207ENST00000574049 GRAMD1CQ8IYS0 662 aa8.5□□□□□ -1.05
RPA1-207ENST00000574049 ANKRD13AQ8IZ07 590 aa8.5□□□□□ -1.05
RPA1-207ENST00000574049 RASGRP4Q8TDF6 673 aa8.5□□□□□ -1.05
RPA1-207ENST00000574049 CARD6Q9BX69 1037 aa8.5□□□□□ -1.05
RPA1-207ENST00000574049 DDX4Q9NQI0 724 aaKnown RBP8.5□□□□□ -1.05
RPA1-207ENST00000574049 TBC1D7Q9P0N9 293 aa8.5□□□□□ -1.05
RPA1-207ENST00000574049 FLT1P17948 1338 aa8.5□□□□□ -1.05
RPA1-207ENST00000574049 MACROD2A1Z1Q3 448 aa8.5□□□□□ -1.05
RPA1-207ENST00000574049 PFKFB2O60825 505 aa8.5□□□□□ -1.05
RPA1-207ENST00000574049 PAPPAQ13219 1627 aa8.5□□□□□ -1.05
RPA1-207ENST00000574049 CUL4AQ13619 759 aa8.5□□□□□ -1.05
RPA1-207ENST00000574049 NBPF9Q3BBW0 867 aa8.5□□□□□ -1.05
RPA1-207ENST00000574049 USP17L2Q6R6M4 530 aa8.5□□□□□ -1.05
RPA1-207ENST00000574049 RASGRP2Q7LDG7 609 aa8.5□□□□□ -1.05
RPA1-207ENST00000574049 TMTC2Q8N394 836 aa8.5□□□□□ -1.05
RPA1-207ENST00000574049 ENAHQ8N8S7 591 aaPredicted RBP8.5□□□□□ -1.05
RPA1-207ENST00000574049 FANCBQ8NB91 859 aa8.5□□□□□ -1.05
RPA1-207ENST00000574049 PNMA1Q8ND90 353 aa8.5□□□□□ -1.05
RPA1-207ENST00000574049 GPKOWQ92917 476 aaPredicted RBP eCLIP8.5□□□□□ -1.05
RPA1-207ENST00000574049 KCNH3Q9ULD8 1083 aa8.5□□□□□ -1.05
RPA1-207ENST00000574049 GPR75-ASB3A0A0A6YYF3 556 aa8.5□□□□□ -1.05
RPA1-207ENST00000574049 H7C1D1 291 aa8.5□□□□□ -1.05
RPA1-207ENST00000574049 MRPS25P82663 173 aaKnown RBP8.5□□□□□ -1.05
RPA1-207ENST00000574049 FAM160A1Q05DH4 1040 aa8.5□□□□□ -1.05
RPA1-207ENST00000574049 NR5A1Q13285 461 aa8.5□□□□□ -1.05
RPA1-207ENST00000574049 C12orf60Q5U649 245 aa8.5□□□□□ -1.05
RPA1-207ENST00000574049 ILDR2Q71H61 639 aa8.5□□□□□ -1.05
RPA1-207ENST00000574049 MAEAQ7L5Y9 396 aa8.5□□□□□ -1.05
RPA1-207ENST00000574049 NSUN7Q8NE18 718 aaKnown RBP8.5□□□□□ -1.05
RPA1-207ENST00000574049 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.5□□□□□ -1.05
RPA1-207ENST00000574049 FZD1Q9UP38 647 aa8.5□□□□□ -1.05
RPA1-207ENST00000574049 NHSQ6T4R5 1651 aa8.49□□□□□ -1.05
RPA1-207ENST00000574049 COL1A1P02452 1464 aaPredicted RBP8.49□□□□□ -1.05
RPA1-207ENST00000574049 KLRG2A4D1S0 409 aaPredicted RBP8.49□□□□□ -1.05
RPA1-207ENST00000574049 PLEKHA8P1O95397 391 aa8.49□□□□□ -1.05
RPA1-207ENST00000574049 CALM1P0DP23 149 aa8.49□□□□□ -1.05
RPA1-207ENST00000574049 CALM2P0DP24 149 aa8.49□□□□□ -1.05
RPA1-207ENST00000574049 CALM3P0DP25 149 aa8.49□□□□□ -1.05
RPA1-207ENST00000574049 TXKP42681 527 aa8.49□□□□□ -1.05
RPA1-207ENST00000574049 DACT2Q5SW24 774 aa8.49□□□□□ -1.05
RPA1-207ENST00000574049 KRBA2Q6ZNG9 492 aa8.49□□□□□ -1.05
RPA1-207ENST00000574049 CACTINQ8WUQ7 758 aaKnown RBP8.49□□□□□ -1.05
RPA1-207ENST00000574049 STAG1Q8WVM7 1258 aa8.49□□□□□ -1.05
RPA1-207ENST00000574049 TACC3Q9Y6A5 838 aa8.49□□□□□ -1.05
RPA1-207ENST00000574049 RFX7Q2KHR2 1363 aa8.49□□□□□ -1.05
RPA1-207ENST00000574049 SLC16A2P36021 539 aa8.49□□□□□ -1.05
RPA1-207ENST00000574049 NDUFA8P51970 172 aa8.49□□□□□ -1.05
RPA1-207ENST00000574049 TGFB2P61812 414 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms