RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 ZNF589Q86UQ0 364 aaPredicted RBP11.88□□□□□ -0.51
RPA1-206ENST00000573994 PLEKHM2Q8IWE5 1019 aa11.88□□□□□ -0.51
RPA1-206ENST00000573994 DIS3LQ8TF46 1054 aaKnown RBP11.88□□□□□ -0.51
RPA1-206ENST00000573994 CHMP4CQ96CF2 233 aa11.88□□□□□ -0.51
RPA1-206ENST00000573994 ZNF287Q9HBT7 754 aa11.88□□□□□ -0.51
RPA1-206ENST00000573994 HOXC10Q9NYD6 342 aa11.88□□□□□ -0.51
RPA1-206ENST00000573994 FLRT1Q9NZU1 646 aa11.88□□□□□ -0.51
RPA1-206ENST00000573994 CLIP2Q9UDT6 1046 aa11.88□□□□□ -0.51
RPA1-206ENST00000573994 IVNS1ABPQ9Y6Y0 642 aa11.88□□□□□ -0.51
RPA1-206ENST00000573994 PLIN4Q96Q06 1357 aa11.88□□□□□ -0.51
RPA1-206ENST00000573994 GREB1LQ9C091 1923 aaPredicted RBP11.88□□□□□ -0.51
RPA1-206ENST00000573994 SLC3A2P08195 630 aaKnown RBP11.87□□□□□ -0.51
RPA1-206ENST00000573994 TSPY3P0CV98 308 aa11.87□□□□□ -0.51
RPA1-206ENST00000573994 TSPY8P0CW00 308 aa11.87□□□□□ -0.51
RPA1-206ENST00000573994 XRCC5P13010 732 aaKnown RBP11.87□□□□□ -0.51
RPA1-206ENST00000573994 PDE4BQ07343 736 aa11.87□□□□□ -0.51
RPA1-206ENST00000573994 GRB14Q14449 540 aa11.87□□□□□ -0.51
RPA1-206ENST00000573994 TMEM132BQ14DG7 1078 aa11.87□□□□□ -0.51
RPA1-206ENST00000573994 ARSIQ5FYB1 569 aa11.87□□□□□ -0.51
RPA1-206ENST00000573994 MAP3K21Q5TCX8 1036 aa11.87□□□□□ -0.51
RPA1-206ENST00000573994 NCAPG2Q86XI2 1143 aa11.87□□□□□ -0.51
RPA1-206ENST00000573994 ZNF444Q8N0Y2 327 aaPredicted RBP11.87□□□□□ -0.51
RPA1-206ENST00000573994 MB21D1Q8N884 522 aa11.87□□□□□ -0.51
RPA1-206ENST00000573994 HMX1Q9NP08 348 aaPredicted RBP11.87□□□□□ -0.51
RPA1-206ENST00000573994 INCENPQ9NQS7 918 aa11.87□□□□□ -0.51
RPA1-206ENST00000573994 HELLSQ9NRZ9 838 aa11.87□□□□□ -0.51
RPA1-206ENST00000573994 NYAP2Q9P242 653 aa11.87□□□□□ -0.51
RPA1-206ENST00000573994 PPP1R9AQ9ULJ8 1098 aa11.87□□□□□ -0.51
RPA1-206ENST00000573994 ISY1Q9ULR0 285 aaKnown RBP11.87□□□□□ -0.51
RPA1-206ENST00000573994 DOCK3Q8IZD9 2030 aa11.87□□□□□ -0.51
RPA1-206ENST00000573994 RPTORQ8N122 1335 aa11.86□□□□□ -0.51
RPA1-206ENST00000573994 POTEB3A0JP26 581 aa11.86□□□□□ -0.51
RPA1-206ENST00000573994 F5H6K3 240 aa11.86□□□□□ -0.51
RPA1-206ENST00000573994 SLC34A2O95436 690 aa11.86□□□□□ -0.51
RPA1-206ENST00000573994 ADORA2AP29274 412 aa11.86□□□□□ -0.51
RPA1-206ENST00000573994 CCND3P30281 292 aaPredicted RBP11.86□□□□□ -0.51
RPA1-206ENST00000573994 TFAP4Q01664 338 aa11.86□□□□□ -0.51
RPA1-206ENST00000573994 KLRC3Q07444 240 aa11.86□□□□□ -0.51
RPA1-206ENST00000573994 CACNB2Q08289 660 aaPredicted RBP11.86□□□□□ -0.51
RPA1-206ENST00000573994 MCMDC2Q4G0Z9 681 aa11.86□□□□□ -0.51
RPA1-206ENST00000573994 POTEBQ6S5H4 581 aa11.86□□□□□ -0.51
RPA1-206ENST00000573994 TRMT44Q8IYL2 757 aaKnown RBP11.86□□□□□ -0.51
RPA1-206ENST00000573994 NPLOC4Q8TAT6 608 aa11.86□□□□□ -0.51
RPA1-206ENST00000573994 SLF1Q9BQI6 1058 aa11.86□□□□□ -0.51
RPA1-206ENST00000573994 CRISPLD2Q9H0B8 497 aa11.86□□□□□ -0.51
RPA1-206ENST00000573994 MTMR4Q9NYA4 1195 aa11.86□□□□□ -0.51
RPA1-206ENST00000573994 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.86□□□□□ -0.51
RPA1-206ENST00000573994 TACC3Q9Y6A5 838 aa11.86□□□□□ -0.51
RPA1-206ENST00000573994 CEP290O15078 2479 aa11.86□□□□□ -0.51
RPA1-206ENST00000573994 CCDC171Q6TFL3 1326 aa11.86□□□□□ -0.51
RPA1-206ENST00000573994 H0YGN5 161 aa11.85□□□□□ -0.51
RPA1-206ENST00000573994 VWA5AO00534 786 aa11.85□□□□□ -0.51
RPA1-206ENST00000573994 NMT2O60551 498 aa11.85□□□□□ -0.51
RPA1-206ENST00000573994 TTLL1O95922 423 aa11.85□□□□□ -0.51
RPA1-206ENST00000573994 HAND2P61296 217 aa11.85□□□□□ -0.51
RPA1-206ENST00000573994 RASGRP2Q7LDG7 609 aa11.85□□□□□ -0.51
RPA1-206ENST00000573994 SHCBP1Q8NEM2 672 aa11.85□□□□□ -0.51
RPA1-206ENST00000573994 NEDD1Q8NHV4 660 aa11.85□□□□□ -0.51
RPA1-206ENST00000573994 DPF3Q92784 378 aa11.85□□□□□ -0.51
RPA1-206ENST00000573994 RLFQ13129 1914 aa11.85□□□□□ -0.51
RPA1-206ENST00000573994 TSPY2A6NKD2 308 aa11.84□□□□□ -0.51
RPA1-206ENST00000573994 RANBP6O60518 1105 aaKnown RBP11.84□□□□□ -0.51
RPA1-206ENST00000573994 PPP1R37O75864 691 aa11.84□□□□□ -0.51
RPA1-206ENST00000573994 HSPD1P10809 573 aaKnown RBP11.84□□□□□ -0.51
RPA1-206ENST00000573994 SDSP20132 328 aa11.84□□□□□ -0.51
RPA1-206ENST00000573994 PDE4AP27815 886 aa11.84□□□□□ -0.51
RPA1-206ENST00000573994 CYP2C19P33261 490 aa11.84□□□□□ -0.51
RPA1-206ENST00000573994 MMRN1Q13201 1228 aa11.84□□□□□ -0.51
RPA1-206ENST00000573994 RRP12Q5JTH9 1297 aaKnown RBP11.84□□□□□ -0.51
RPA1-206ENST00000573994 MFSD14CQ5VZR4 134 aa11.84□□□□□ -0.51
RPA1-206ENST00000573994 DPP9Q86TI2 863 aa11.84□□□□□ -0.51
RPA1-206ENST00000573994 REPS2Q8NFH8 660 aa11.84□□□□□ -0.51
RPA1-206ENST00000573994 KIFC2Q96AC6 838 aa11.84□□□□□ -0.51
RPA1-206ENST00000573994 PAWRQ96IZ0 340 aaKnown RBP11.84□□□□□ -0.51
RPA1-206ENST00000573994 KRTAP3-3Q9BYR6 98 aa11.84□□□□□ -0.51
RPA1-206ENST00000573994 KRTAP3-2Q9BYR7 98 aa11.84□□□□□ -0.51
RPA1-206ENST00000573994 OSBPL3Q9H4L5 887 aa11.84□□□□□ -0.51
RPA1-206ENST00000573994 MROH8Q9H579 483 aa11.84□□□□□ -0.51
RPA1-206ENST00000573994 TOMM22Q9NS69 142 aa11.84□□□□□ -0.51
RPA1-206ENST00000573994 DIAPH3Q9NSV4 1193 aa11.84□□□□□ -0.51
RPA1-206ENST00000573994 COBLO75128 1261 aa11.83□□□□□ -0.52
RPA1-206ENST00000573994 FGAP02671 866 aa11.83□□□□□ -0.52
RPA1-206ENST00000573994 PGK2P07205 417 aa11.83□□□□□ -0.52
RPA1-206ENST00000573994 HOXC6P09630 235 aa11.83□□□□□ -0.52
RPA1-206ENST00000573994 SLC4A3P48751 1232 aa11.83□□□□□ -0.52
RPA1-206ENST00000573994 SLFN13Q68D06 897 aa11.83□□□□□ -0.52
RPA1-206ENST00000573994 SNRNP48Q6IEG0 339 aaKnown RBP11.83□□□□□ -0.52
RPA1-206ENST00000573994 CWC27Q6UX04 472 aaKnown RBP11.83□□□□□ -0.52
RPA1-206ENST00000573994 ZNF687Q8N1G0 1237 aa11.83□□□□□ -0.52
RPA1-206ENST00000573994 GMCL1P1Q8NEA9 526 aa11.83□□□□□ -0.52
RPA1-206ENST00000573994 TRPV1Q8NER1 839 aa11.83□□□□□ -0.52
RPA1-206ENST00000573994 MMP19Q99542 508 aa11.83□□□□□ -0.52
RPA1-206ENST00000573994 HTATIP2Q9BUP3 242 aa11.83□□□□□ -0.52
RPA1-206ENST00000573994 NBPF3Q9H094 633 aa11.83□□□□□ -0.52
RPA1-206ENST00000573994 ANAPC4Q9UJX5 808 aa11.83□□□□□ -0.52
RPA1-206ENST00000573994 ZNF214Q9UL59 606 aaPredicted RBP11.83□□□□□ -0.52
RPA1-206ENST00000573994 ADAMTS5Q9UNA0 930 aa11.83□□□□□ -0.52
RPA1-206ENST00000573994 STX8Q9UNK0 236 aa11.83□□□□□ -0.52
RPA1-206ENST00000573994 MTMR7Q9Y216 660 aa11.83□□□□□ -0.52
RPA1-206ENST00000573994 RANBP2P49792 3224 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms