RNA–Protein interactions for RNA: ENST00000573891.6

CACNA1A-203, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-203ENST00000573891 DBNLQ9UJU6 430 aaKnown RBP7.34□□□□□ -1.23
CACNA1A-203ENST00000573891 NOP58Q9Y2X3 529 aaKnown RBP7.34□□□□□ -1.23
CACNA1A-203ENST00000573891 UNC80Q8N2C7 3258 aa7.34□□□□□ -1.23
CACNA1A-203ENST00000573891 FOCADQ5VW36 1801 aa7.34□□□□□ -1.24
CACNA1A-203ENST00000573891 CDK5RAP2Q96SN8 1893 aa7.33□□□□□ -1.24
CACNA1A-203ENST00000573891 DNM1LO00429 736 aa7.33□□□□□ -1.24
CACNA1A-203ENST00000573891 HOXA2O43364 376 aa7.33□□□□□ -1.24
CACNA1A-203ENST00000573891 MSCO60682 206 aa7.33□□□□□ -1.24
CACNA1A-203ENST00000573891 BCAR3O75815 825 aa7.33□□□□□ -1.24
CACNA1A-203ENST00000573891 IDH1O75874 414 aaKnown RBP7.33□□□□□ -1.24
CACNA1A-203ENST00000573891 PTPREP23469 700 aa7.33□□□□□ -1.24
CACNA1A-203ENST00000573891 MCCP23508 829 aa7.33□□□□□ -1.24
CACNA1A-203ENST00000573891 USP14P54578 494 aa7.33□□□□□ -1.24
CACNA1A-203ENST00000573891 ATP8B2P98198 1209 aa7.33□□□□□ -1.24
CACNA1A-203ENST00000573891 ZYXQ15942 572 aaKnown RBP7.33□□□□□ -1.24
CACNA1A-203ENST00000573891 TMED8Q6PL24 325 aaPredicted RBP7.33□□□□□ -1.24
CACNA1A-203ENST00000573891 TMEM57Q8N5G2 664 aa7.33□□□□□ -1.24
CACNA1A-203ENST00000573891 MIGA1Q8NAN2 632 aa7.33□□□□□ -1.24
CACNA1A-203ENST00000573891 ACER1Q8TDN7 264 aa7.33□□□□□ -1.24
CACNA1A-203ENST00000573891 FRAT1Q92837 279 aaPredicted RBP7.33□□□□□ -1.24
CACNA1A-203ENST00000573891 EDC3Q96F86 508 aaKnown RBP7.33□□□□□ -1.24
CACNA1A-203ENST00000573891 CWC22Q9HCG8 908 aaKnown RBP7.33□□□□□ -1.24
CACNA1A-203ENST00000573891 SCUBE2Q9NQ36 999 aa7.33□□□□□ -1.24
CACNA1A-203ENST00000573891 TLR7Q9NYK1 1049 aaKnown RBP7.33□□□□□ -1.24
CACNA1A-203ENST00000573891 BTBD7Q9P203 1132 aa7.33□□□□□ -1.24
CACNA1A-203ENST00000573891 DDX20Q9UHI6 824 aaKnown RBP7.33□□□□□ -1.24
CACNA1A-203ENST00000573891 PCDHGC3Q9UN70 934 aa7.33□□□□□ -1.24
CACNA1A-203ENST00000573891 VCANP13611 3396 aa7.33□□□□□ -1.24
CACNA1A-203ENST00000573891 CARNS1A5YM72 827 aa7.32□□□□□ -1.24
CACNA1A-203ENST00000573891 PALM3A6NDB9 673 aaPredicted RBP7.32□□□□□ -1.24
CACNA1A-203ENST00000573891 PPP1R3GB7ZBB8 358 aa7.32□□□□□ -1.24
CACNA1A-203ENST00000573891 SURF6O75683 361 aaKnown RBP7.32□□□□□ -1.24
CACNA1A-203ENST00000573891 FDX1P10109 184 aa7.32□□□□□ -1.24
CACNA1A-203ENST00000573891 CYBAP13498 195 aa7.32□□□□□ -1.24
CACNA1A-203ENST00000573891 CYP2C19P33261 490 aa7.32□□□□□ -1.24
CACNA1A-203ENST00000573891 SHMT1P34896 483 aa7.32□□□□□ -1.24
CACNA1A-203ENST00000573891 USP5P45974 858 aa7.32□□□□□ -1.24
CACNA1A-203ENST00000573891 GCGRP47871 477 aa7.32□□□□□ -1.24
CACNA1A-203ENST00000573891 RBM25P49756 843 aaKnown RBP7.32□□□□□ -1.24
CACNA1A-203ENST00000573891 USP46P62068 366 aa7.32□□□□□ -1.24
CACNA1A-203ENST00000573891 GABPAQ06546 454 aa7.32□□□□□ -1.24
CACNA1A-203ENST00000573891 VAC14Q08AM6 782 aa7.32□□□□□ -1.24
CACNA1A-203ENST00000573891 OS9Q13438 667 aaPredicted RBP7.32□□□□□ -1.24
CACNA1A-203ENST00000573891 RAB3GAP1Q15042 981 aa7.32□□□□□ -1.24
CACNA1A-203ENST00000573891 ABCB5Q2M3G0 1257 aa7.32□□□□□ -1.24
CACNA1A-203ENST00000573891 CERKLQ49MI3 558 aaPredicted RBP7.32□□□□□ -1.24
CACNA1A-203ENST00000573891 ARSIQ5FYB1 569 aa7.32□□□□□ -1.24
CACNA1A-203ENST00000573891 TTC6Q86TZ1 520 aa7.32□□□□□ -1.24
CACNA1A-203ENST00000573891 FTSJ3Q8IY81 847 aaKnown RBP7.32□□□□□ -1.24
CACNA1A-203ENST00000573891 TRPV1Q8NER1 839 aa7.32□□□□□ -1.24
CACNA1A-203ENST00000573891 NPLOC4Q8TAT6 608 aa7.32□□□□□ -1.24
CACNA1A-203ENST00000573891 ZNF592Q92610 1267 aa7.32□□□□□ -1.24
CACNA1A-203ENST00000573891 LPAR1Q92633 364 aa7.32□□□□□ -1.24
CACNA1A-203ENST00000573891 EAF2Q96CJ1 260 aaPredicted RBP7.32□□□□□ -1.24
CACNA1A-203ENST00000573891 GUCD1Q96NT3 240 aa7.32□□□□□ -1.24
CACNA1A-203ENST00000573891 LBHD1Q9BQE6 289 aaPredicted RBP7.32□□□□□ -1.24
CACNA1A-203ENST00000573891 SENP6Q9GZR1 1112 aaPredicted RBP7.32□□□□□ -1.24
CACNA1A-203ENST00000573891 BRPF3Q9ULD4 1205 aa7.32□□□□□ -1.24
CACNA1A-203ENST00000573891 IVNS1ABPQ9Y6Y0 642 aa7.32□□□□□ -1.24
CACNA1A-203ENST00000573891 LAMA2P24043 3122 aaKnown RBP7.32□□□□□ -1.24
CACNA1A-203ENST00000573891 GUCY1A2P33402 732 aa7.31□□□□□ -1.24
CACNA1A-203ENST00000573891 PLCD1P51178 756 aa7.31□□□□□ -1.24
CACNA1A-203ENST00000573891 ATP2B2Q01814 1243 aa7.31□□□□□ -1.24
CACNA1A-203ENST00000573891 MAP3K12Q12852 859 aa7.31□□□□□ -1.24
CACNA1A-203ENST00000573891 WDR78Q5VTH9 848 aa7.31□□□□□ -1.24
CACNA1A-203ENST00000573891 ZKSCAN2Q63HK3 967 aa7.31□□□□□ -1.24
CACNA1A-203ENST00000573891 OLFML2BQ68BL8 750 aa7.31□□□□□ -1.24
CACNA1A-203ENST00000573891 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.31□□□□□ -1.24
CACNA1A-203ENST00000573891 MAGEB6Q8N7X4 407 aa7.31□□□□□ -1.24
CACNA1A-203ENST00000573891 RDH13Q8NBN7 331 aa7.31□□□□□ -1.24
CACNA1A-203ENST00000573891 RIOK1Q9BRS2 568 aaKnown RBP7.31□□□□□ -1.24
CACNA1A-203ENST00000573891 CCDC8Q9H0W5 538 aaPredicted RBP7.31□□□□□ -1.24
CACNA1A-203ENST00000573891 RPAP3Q9H6T3 665 aaPredicted RBP7.31□□□□□ -1.24
CACNA1A-203ENST00000573891 ANTXR1Q9H6X2 564 aa7.31□□□□□ -1.24
CACNA1A-203ENST00000573891 CABP5Q9NP86 173 aa7.31□□□□□ -1.24
CACNA1A-203ENST00000573891 SPTBN5Q9NRC6 3674 aaKnown RBP7.31□□□□□ -1.24
CACNA1A-203ENST00000573891 DNAH12Q6ZR08 3092 aa7.3□□□□□ -1.24
CACNA1A-203ENST00000573891 FRMPD3Q5JV73 1810 aa7.3□□□□□ -1.24
CACNA1A-203ENST00000573891 ZNF236Q9UL36 1845 aa7.3□□□□□ -1.24
CACNA1A-203ENST00000573891 A0A1W2PRG0 241 aa7.3□□□□□ -1.24
CACNA1A-203ENST00000573891 TRIM6-TRIM34B2RNG4 842 aa7.3□□□□□ -1.24
CACNA1A-203ENST00000573891 CCER2I3L3R5 266 aa7.3□□□□□ -1.24
CACNA1A-203ENST00000573891 STRNO43815 780 aa7.3□□□□□ -1.24
CACNA1A-203ENST00000573891 ADORA2AP29274 412 aa7.3□□□□□ -1.24
CACNA1A-203ENST00000573891 CNGA1P29973 690 aa7.3□□□□□ -1.24
CACNA1A-203ENST00000573891 RTP1P59025 263 aa7.3□□□□□ -1.24
CACNA1A-203ENST00000573891 COG2Q14746 738 aa7.3□□□□□ -1.24
CACNA1A-203ENST00000573891 SEPT2Q15019 361 aa7.3□□□□□ -1.24
CACNA1A-203ENST00000573891 SNX17Q15036 470 aa7.3□□□□□ -1.24
CACNA1A-203ENST00000573891 MB21D1Q8N884 522 aa7.3□□□□□ -1.24
CACNA1A-203ENST00000573891 ARRDC4Q8NCT1 418 aa7.3□□□□□ -1.24
CACNA1A-203ENST00000573891 SHCBP1Q8NEM2 672 aa7.3□□□□□ -1.24
CACNA1A-203ENST00000573891 UCN2Q96RP3 112 aa7.3□□□□□ -1.24
CACNA1A-203ENST00000573891 COL25A1Q9BXS0 654 aaPredicted RBP7.3□□□□□ -1.24
CACNA1A-203ENST00000573891 MOV10L1Q9BXT6 1211 aaKnown RBP7.3□□□□□ -1.24
CACNA1A-203ENST00000573891 SPATC1LQ9H0A9 340 aa7.3□□□□□ -1.24
CACNA1A-203ENST00000573891 LHX6Q9UPM6 363 aa7.3□□□□□ -1.24
CACNA1A-203ENST00000573891 MYO5AQ9Y4I1 1855 aaKnown RBP7.3□□□□□ -1.24
CACNA1A-203ENST00000573891 CDH23Q9H251 3354 aa7.29□□□□□ -1.24
CACNA1A-203ENST00000573891 SEPT4O43236 478 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms