RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 BADQ92934 168 aa26.28■■□□□ 1.8
SNF8-216ENST00000573795 GPATCH3Q96I76 525 aa26.28■■□□□ 1.8
SNF8-216ENST00000573795 GUCD1Q96NT3 240 aa26.28■■□□□ 1.8
SNF8-216ENST00000573795 CLIP2Q9UDT6 1046 aa26.28■■□□□ 1.8
SNF8-216ENST00000573795 CDH23Q9H251 3354 aa26.28■■□□□ 1.8
SNF8-216ENST00000573795 CUL9Q8IWT3 2517 aa26.28■■□□□ 1.8
SNF8-216ENST00000573795 DNAJC25-GNG10A0A024R161 153 aa26.27■■□□□ 1.8
SNF8-216ENST00000573795 ZFYP08048 801 aaPredicted RBP26.27■■□□□ 1.8
SNF8-216ENST00000573795 SHHQ15465 462 aa26.27■■□□□ 1.8
SNF8-216ENST00000573795 CEP95Q96GE4 821 aa26.27■■□□□ 1.8
SNF8-216ENST00000573795 MCM3APO60318 1980 aa26.26■■□□□ 1.79
SNF8-216ENST00000573795 ATP2A1O14983 1001 aa26.26■■□□□ 1.79
SNF8-216ENST00000573795 ADAMTS4O75173 837 aa26.26■■□□□ 1.79
SNF8-216ENST00000573795 AKR1A1P14550 325 aa26.26■■□□□ 1.79
SNF8-216ENST00000573795 GNAT2P19087 354 aa26.26■■□□□ 1.79
SNF8-216ENST00000573795 TDO2P48775 406 aa26.26■■□□□ 1.79
SNF8-216ENST00000573795 TLE2Q04725 743 aa26.26■■□□□ 1.79
SNF8-216ENST00000573795 PRPF38AQ8NAV1 312 aaKnown RBP26.26■■□□□ 1.79
SNF8-216ENST00000573795 MKL1Q969V6 931 aa26.26■■□□□ 1.79
SNF8-216ENST00000573795 SEC62Q99442 399 aaKnown RBP26.26■■□□□ 1.79
SNF8-216ENST00000573795 PLIN4Q96Q06 1357 aa26.25■■□□□ 1.79
SNF8-216ENST00000573795 A0A1W2PQ45 241 aaPredicted RBP26.25■■□□□ 1.79
SNF8-216ENST00000573795 A0A1W2PQY0 241 aa26.25■■□□□ 1.79
SNF8-216ENST00000573795 SNAI1O95863 264 aaPredicted RBP26.25■■□□□ 1.79
SNF8-216ENST00000573795 ITGB8P26012 769 aa26.25■■□□□ 1.79
SNF8-216ENST00000573795 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.25■■□□□ 1.79
SNF8-216ENST00000573795 RNF180Q86T96 592 aa26.25■■□□□ 1.79
SNF8-216ENST00000573795 IFNL3Q8IZI9 196 aa26.25■■□□□ 1.79
SNF8-216ENST00000573795 PI4K2BQ8TCG2 481 aa26.25■■□□□ 1.79
SNF8-216ENST00000573795 OTUD7AQ8TE49 926 aaPredicted RBP26.25■■□□□ 1.79
SNF8-216ENST00000573795 MTMR4Q9NYA4 1195 aa26.25■■□□□ 1.79
SNF8-216ENST00000573795 SYNGAP1Q96PV0 1343 aa26.24■■□□□ 1.79
SNF8-216ENST00000573795 PATL2C9JE40 543 aaKnown RBP26.24■■□□□ 1.79
SNF8-216ENST00000573795 MAMDC4Q6UXC1 1216 aa26.24■■□□□ 1.79
SNF8-216ENST00000573795 LRRC47Q8N1G4 583 aaKnown RBP26.24■■□□□ 1.79
SNF8-216ENST00000573795 MSL3Q8N5Y2 521 aaKnown RBP26.24■■□□□ 1.79
SNF8-216ENST00000573795 FGD4Q96M96 766 aa26.24■■□□□ 1.79
SNF8-216ENST00000573795 SLC38A10Q9HBR0 1119 aa26.24■■□□□ 1.79
SNF8-216ENST00000573795 TTC41PQ6P2S7 1318 aa26.23■■□□□ 1.79
SNF8-216ENST00000573795 SYNRGQ9UMZ2 1314 aa26.23■■□□□ 1.79
SNF8-216ENST00000573795 ZNF444Q8N0Y2 327 aaPredicted RBP26.23■■□□□ 1.79
SNF8-216ENST00000573795 CPXCR1Q8N123 301 aa26.23■■□□□ 1.79
SNF8-216ENST00000573795 RAVER2Q9HCJ3 691 aaKnown RBP26.23■■□□□ 1.79
SNF8-216ENST00000573795 CNPY2Q9Y2B0 182 aa26.23■■□□□ 1.79
SNF8-216ENST00000573795 PCDHB15Q9Y5E8 787 aa26.23■■□□□ 1.79
SNF8-216ENST00000573795 APPP05067 770 aa26.22■■□□□ 1.79
SNF8-216ENST00000573795 GMCL1P1Q8NEA9 526 aa26.22■■□□□ 1.79
SNF8-216ENST00000573795 KIFC2Q96AC6 838 aa26.22■■□□□ 1.79
SNF8-216ENST00000573795 FAM161BQ96MY7 647 aa26.22■■□□□ 1.79
SNF8-216ENST00000573795 SYNPO2Q9UMS6 1093 aa26.22■■□□□ 1.79
SNF8-216ENST00000573795 ZBED4O75132 1171 aa26.21■■□□□ 1.79
SNF8-216ENST00000573795 CCSAPQ6IQ19 270 aaPredicted RBP26.21■■□□□ 1.79
SNF8-216ENST00000573795 KLHDC9Q8NEP7 349 aa26.21■■□□□ 1.79
SNF8-216ENST00000573795 NEDD1Q8NHV4 660 aa26.21■■□□□ 1.79
SNF8-216ENST00000573795 DDX11Q96FC9 970 aa26.21■■□□□ 1.79
SNF8-216ENST00000573795 ADCY6O43306 1168 aa26.2■■□□□ 1.78
SNF8-216ENST00000573795 TTLL1O95922 423 aa26.2■■□□□ 1.78
SNF8-216ENST00000573795 CLTBP09497 229 aa26.2■■□□□ 1.78
SNF8-216ENST00000573795 SLC4A3P48751 1232 aa26.2■■□□□ 1.78
SNF8-216ENST00000573795 EPHB4P54760 987 aa26.2■■□□□ 1.78
SNF8-216ENST00000573795 ZNF467Q7Z7K2 595 aaPredicted RBP26.2■■□□□ 1.78
SNF8-216ENST00000573795 ZNF287Q9HBT7 754 aa26.2■■□□□ 1.78
SNF8-216ENST00000573795 FEM1BQ9UK73 627 aa26.2■■□□□ 1.78
SNF8-216ENST00000573795 TACC3Q9Y6A5 838 aa26.2■■□□□ 1.78
SNF8-216ENST00000573795 MYADML2A6NDP7 307 aa26.19■■□□□ 1.78
SNF8-216ENST00000573795 KIAA0355O15063 1070 aa26.19■■□□□ 1.78
SNF8-216ENST00000573795 FOXP2O15409 715 aa26.19■■□□□ 1.78
SNF8-216ENST00000573795 ACLYP53396 1101 aa26.19■■□□□ 1.78
SNF8-216ENST00000573795 IRX5P78411 483 aaPredicted RBP26.19■■□□□ 1.78
SNF8-216ENST00000573795 ZMYM1Q5SVZ6 1142 aa26.19■■□□□ 1.78
SNF8-216ENST00000573795 TSEN34Q9BSV6 310 aaKnown RBP26.19■■□□□ 1.78
SNF8-216ENST00000573795 ZHX1Q9UKY1 873 aaPredicted RBP26.19■■□□□ 1.78
SNF8-216ENST00000573795 FAM184BQ9ULE4 1060 aa26.19■■□□□ 1.78
SNF8-216ENST00000573795 PQBP1O60828 265 aaKnown RBP26.18■■□□□ 1.78
SNF8-216ENST00000573795 ZNF697Q5TEC3 545 aa26.18■■□□□ 1.78
SNF8-216ENST00000573795 SLFN13Q68D06 897 aa26.18■■□□□ 1.78
SNF8-216ENST00000573795 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.18■■□□□ 1.78
SNF8-216ENST00000573795 SALL3Q9BXA9 1300 aa26.17■■□□□ 1.78
SNF8-216ENST00000573795 BMP3P12645 472 aa26.17■■□□□ 1.78
SNF8-216ENST00000573795 OAZ1P54368 228 aa26.17■■□□□ 1.78
SNF8-216ENST00000573795 PPARAQ07869 468 aa26.17■■□□□ 1.78
SNF8-216ENST00000573795 LRRFIP1Q32MZ4 808 aaKnown RBP26.17■■□□□ 1.78
SNF8-216ENST00000573795 ANKRD33Q7Z3H0 272 aa26.17■■□□□ 1.78
SNF8-216ENST00000573795 FSD1Q9BTV5 496 aa26.17■■□□□ 1.78
SNF8-216ENST00000573795 PRUNE2Q8WUY3 3088 aa26.17■■□□□ 1.78
SNF8-216ENST00000573795 LRRC37A2A6NM11 1700 aa26.17■■□□□ 1.78
SNF8-216ENST00000573795 ERC2O15083 957 aa26.16■■□□□ 1.78
SNF8-216ENST00000573795 DUSP11O75319 330 aaKnown RBP26.16■■□□□ 1.78
SNF8-216ENST00000573795 TSPY3P0CV98 308 aa26.16■■□□□ 1.78
SNF8-216ENST00000573795 TSPY8P0CW00 308 aa26.16■■□□□ 1.78
SNF8-216ENST00000573795 TFAP4Q01664 338 aa26.16■■□□□ 1.78
SNF8-216ENST00000573795 FAAP100Q0VG06 881 aa26.16■■□□□ 1.78
SNF8-216ENST00000573795 ACVR2BQ13705 512 aa26.16■■□□□ 1.78
SNF8-216ENST00000573795 KCNA10Q16322 511 aa26.16■■□□□ 1.78
SNF8-216ENST00000573795 ANKRD35Q8N283 1001 aa26.16■■□□□ 1.78
SNF8-216ENST00000573795 CHST13Q8NET6 341 aa26.16■■□□□ 1.78
SNF8-216ENST00000573795 NACAP1Q9BZK3 213 aa26.16■■□□□ 1.78
SNF8-216ENST00000573795 KATNBL1Q9H079 304 aa26.16■■□□□ 1.78
SNF8-216ENST00000573795 NAPBQ9H115 298 aa26.16■■□□□ 1.78
SNF8-216ENST00000573795 STARD7Q9NQZ5 370 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms