RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 LZTS2Q9BRK4 669 aa10.99□□□□□ -0.65
NPLOC4-208ENST00000572351 ASCC2Q9H1I8 757 aaPredicted RBP10.99□□□□□ -0.65
NPLOC4-208ENST00000572351 ZFYVE28Q9HCC9 887 aa10.99□□□□□ -0.65
NPLOC4-208ENST00000572351 ZCCHC17Q9NP64 241 aaKnown RBP10.99□□□□□ -0.65
NPLOC4-208ENST00000572351 FBXO28Q9NVF7 368 aa10.99□□□□□ -0.65
NPLOC4-208ENST00000572351 HOXC10Q9NYD6 342 aa10.99□□□□□ -0.65
NPLOC4-208ENST00000572351 OTOFQ9HC10 1997 aa10.99□□□□□ -0.65
NPLOC4-208ENST00000572351 TRPM7Q96QT4 1865 aa10.98□□□□□ -0.65
NPLOC4-208ENST00000572351 PALM3A6NDB9 673 aaPredicted RBP10.98□□□□□ -0.65
NPLOC4-208ENST00000572351 KLRF2D3W0D1 207 aa10.98□□□□□ -0.65
NPLOC4-208ENST00000572351 ZBED4O75132 1171 aa10.98□□□□□ -0.65
NPLOC4-208ENST00000572351 EVCP57679 992 aa10.98□□□□□ -0.65
NPLOC4-208ENST00000572351 PPP2R5BQ15173 497 aa10.98□□□□□ -0.65
NPLOC4-208ENST00000572351 TTBK2Q6IQ55 1244 aa10.98□□□□□ -0.65
NPLOC4-208ENST00000572351 HSCBQ8IWL3 235 aa10.98□□□□□ -0.65
NPLOC4-208ENST00000572351 STAG2Q8N3U4 1231 aa10.98□□□□□ -0.65
NPLOC4-208ENST00000572351 PRPF38AQ8NAV1 312 aaKnown RBP10.98□□□□□ -0.65
NPLOC4-208ENST00000572351 GTF3C2Q8WUA4 911 aaPredicted RBP10.98□□□□□ -0.65
NPLOC4-208ENST00000572351 ZSCAN31Q96LW9 406 aaPredicted RBP10.98□□□□□ -0.65
NPLOC4-208ENST00000572351 P2RX7Q99572 595 aaKnown RBP10.98□□□□□ -0.65
NPLOC4-208ENST00000572351 UBA5Q9GZZ9 404 aa10.98□□□□□ -0.65
NPLOC4-208ENST00000572351 VAT1LQ9HCJ6 419 aa10.98□□□□□ -0.65
NPLOC4-208ENST00000572351 MAD2L2Q9UI95 211 aa10.98□□□□□ -0.65
NPLOC4-208ENST00000572351 PPP1R9AQ9ULJ8 1098 aa10.98□□□□□ -0.65
NPLOC4-208ENST00000572351 PLA2G6O60733 806 aa10.97□□□□□ -0.65
NPLOC4-208ENST00000572351 PFKFB2O60825 505 aa10.97□□□□□ -0.65
NPLOC4-208ENST00000572351 CDKL5O76039 1030 aa10.97□□□□□ -0.65
NPLOC4-208ENST00000572351 PLEKHA8P1O95397 391 aa10.97□□□□□ -0.65
NPLOC4-208ENST00000572351 HERVK_113P62684 666 aa10.97□□□□□ -0.65
NPLOC4-208ENST00000572351 AKAP17AQ02040 695 aaKnown RBP10.97□□□□□ -0.65
NPLOC4-208ENST00000572351 MAP2K1Q02750 393 aaPredicted RBP10.97□□□□□ -0.65
NPLOC4-208ENST00000572351 ME3Q16798 604 aa10.97□□□□□ -0.65
NPLOC4-208ENST00000572351 TMTC3Q6ZXV5 915 aa10.97□□□□□ -0.65
NPLOC4-208ENST00000572351 HOMER1Q86YM7 354 aa10.97□□□□□ -0.65
NPLOC4-208ENST00000572351 CMTR1Q8N1G2 835 aaKnown RBP10.97□□□□□ -0.65
NPLOC4-208ENST00000572351 CCDC82Q8N4S0 544 aa10.97□□□□□ -0.65
NPLOC4-208ENST00000572351 NECAB1Q8N987 351 aa10.97□□□□□ -0.65
NPLOC4-208ENST00000572351 ATG4CQ96DT6 458 aa10.97□□□□□ -0.65
NPLOC4-208ENST00000572351 PAGR1Q9BTK6 254 aa10.97□□□□□ -0.65
NPLOC4-208ENST00000572351 CPVLQ9H3G5 476 aa10.97□□□□□ -0.65
NPLOC4-208ENST00000572351 NCOA5Q9HCD5 579 aaKnown RBP10.97□□□□□ -0.65
NPLOC4-208ENST00000572351 SH2B1Q9NRF2 756 aaPredicted RBP10.97□□□□□ -0.65
NPLOC4-208ENST00000572351 SEC63Q9UGP8 760 aaKnown RBP10.97□□□□□ -0.65
NPLOC4-208ENST00000572351 PRR12Q9ULL5 1215 aa10.97□□□□□ -0.65
NPLOC4-208ENST00000572351 HPS5Q9UPZ3 1129 aa10.97□□□□□ -0.65
NPLOC4-208ENST00000572351 MYPNQ86TC9 1320 aa10.97□□□□□ -0.65
NPLOC4-208ENST00000572351 SPDYE16A6NNV3 312 aaPredicted RBP10.96□□□□□ -0.65
NPLOC4-208ENST00000572351 FDX1P10109 184 aa10.96□□□□□ -0.65
NPLOC4-208ENST00000572351 ADD1P35611 737 aaKnown RBP10.96□□□□□ -0.65
NPLOC4-208ENST00000572351 GCLCP48506 637 aaPredicted RBP10.96□□□□□ -0.65
NPLOC4-208ENST00000572351 SLC4A3P48751 1232 aa10.96□□□□□ -0.65
NPLOC4-208ENST00000572351 SCRN1Q12765 414 aa10.96□□□□□ -0.65
NPLOC4-208ENST00000572351 CRHR2Q13324 411 aa10.96□□□□□ -0.65
NPLOC4-208ENST00000572351 PLS1Q14651 629 aa10.96□□□□□ -0.65
NPLOC4-208ENST00000572351 CCDC174Q6PII3 467 aa10.96□□□□□ -0.65
NPLOC4-208ENST00000572351 BTNL9Q6UXG8 535 aa10.96□□□□□ -0.65
NPLOC4-208ENST00000572351 CCAR1Q8IX12 1150 aaKnown RBP10.96□□□□□ -0.65
NPLOC4-208ENST00000572351 MB21D1Q8N884 522 aa10.96□□□□□ -0.65
NPLOC4-208ENST00000572351 PIBF1Q8WXW3 757 aa10.96□□□□□ -0.65
NPLOC4-208ENST00000572351 GTF3C6Q969F1 213 aa10.96□□□□□ -0.65
NPLOC4-208ENST00000572351 RRP36Q96EU6 259 aaKnown RBP10.96□□□□□ -0.65
NPLOC4-208ENST00000572351 RNF186Q9NXI6 227 aa10.96□□□□□ -0.65
NPLOC4-208ENST00000572351 GREB1LQ9C091 1923 aaPredicted RBP10.96□□□□□ -0.66
NPLOC4-208ENST00000572351 SPDYE4A6NLX3 237 aa10.95□□□□□ -0.66
NPLOC4-208ENST00000572351 VWA5AO00534 786 aa10.95□□□□□ -0.66
NPLOC4-208ENST00000572351 CA12O43570 354 aa10.95□□□□□ -0.66
NPLOC4-208ENST00000572351 TRPA1O75762 1119 aa10.95□□□□□ -0.66
NPLOC4-208ENST00000572351 CD2BP2O95400 341 aaKnown RBP10.95□□□□□ -0.66
NPLOC4-208ENST00000572351 LARGE1O95461 756 aa10.95□□□□□ -0.66
NPLOC4-208ENST00000572351 CDC27P30260 824 aa10.95□□□□□ -0.66
NPLOC4-208ENST00000572351 SNAP25P60880 206 aa10.95□□□□□ -0.66
NPLOC4-208ENST00000572351 CDC37Q16543 378 aaPredicted RBP10.95□□□□□ -0.66
NPLOC4-208ENST00000572351 CCDC83Q8IWF9 413 aa10.95□□□□□ -0.66
NPLOC4-208ENST00000572351 TRIM22Q8IYM9 498 aa10.95□□□□□ -0.66
NPLOC4-208ENST00000572351 ADGRF4Q8IZF3 695 aa10.95□□□□□ -0.66
NPLOC4-208ENST00000572351 CPXCR1Q8N123 301 aa10.95□□□□□ -0.66
NPLOC4-208ENST00000572351 SRBD1Q8N5C6 995 aaKnown RBP10.95□□□□□ -0.66
NPLOC4-208ENST00000572351 ANKRD13CQ8N6S4 541 aa10.95□□□□□ -0.66
NPLOC4-208ENST00000572351 DNAJC5GQ8N7S2 189 aa10.95□□□□□ -0.66
NPLOC4-208ENST00000572351 JMJD4Q9H9V9 463 aa10.95□□□□□ -0.66
NPLOC4-208ENST00000572351 CWC22Q9HCG8 908 aaKnown RBP10.95□□□□□ -0.66
NPLOC4-208ENST00000572351 CPA4Q9UI42 421 aa10.95□□□□□ -0.66
NPLOC4-208ENST00000572351 NID2Q14112 1375 aa10.94□□□□□ -0.66
NPLOC4-208ENST00000572351 K7ELQ4 463 aaPredicted RBP10.94□□□□□ -0.66
NPLOC4-208ENST00000572351 TLR2O60603 784 aa10.94□□□□□ -0.66
NPLOC4-208ENST00000572351 PPFIA3O75145 1194 aa10.94□□□□□ -0.66
NPLOC4-208ENST00000572351 TBC1D8O95759 1140 aa10.94□□□□□ -0.66
NPLOC4-208ENST00000572351 SMARCA1P28370 1054 aa10.94□□□□□ -0.66
NPLOC4-208ENST00000572351 CCNA1P78396 465 aa10.94□□□□□ -0.66
NPLOC4-208ENST00000572351 SSRP1Q08945 709 aaKnown RBP10.94□□□□□ -0.66
NPLOC4-208ENST00000572351 NBPF11Q86T75 865 aa10.94□□□□□ -0.66
NPLOC4-208ENST00000572351 GPRC5AQ8NFJ5 357 aa10.94□□□□□ -0.66
NPLOC4-208ENST00000572351 PHKBQ93100 1093 aa10.94□□□□□ -0.66
NPLOC4-208ENST00000572351 SNX21Q969T3 373 aa10.94□□□□□ -0.66
NPLOC4-208ENST00000572351 TMX3Q96JJ7 454 aa10.94□□□□□ -0.66
NPLOC4-208ENST00000572351 PIGSQ96S52 555 aa10.94□□□□□ -0.66
NPLOC4-208ENST00000572351 SPZ1Q9BXG8 430 aa10.94□□□□□ -0.66
NPLOC4-208ENST00000572351 SLC26A6Q9BXS9 759 aa10.94□□□□□ -0.66
NPLOC4-208ENST00000572351 RANBP17Q9H2T7 1088 aaKnown RBP10.94□□□□□ -0.66
NPLOC4-208ENST00000572351 SLC38A10Q9HBR0 1119 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms