RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 HMGCRP04035 888 aa16.36■□□□□ 0.21
RPAIN-211ENST00000572174 ZKSCAN1P17029 563 aaPredicted RBP16.36■□□□□ 0.21
RPAIN-211ENST00000572174 MCCP23508 829 aa16.36■□□□□ 0.21
RPAIN-211ENST00000572174 STAT3P40763 770 aa16.36■□□□□ 0.21
RPAIN-211ENST00000572174 Q3C1V9 767 aa16.36■□□□□ 0.21
RPAIN-211ENST00000572174 IFIT1BQ5T764 474 aaKnown RBP16.36■□□□□ 0.21
RPAIN-211ENST00000572174 SKAP1Q86WV1 359 aa16.36■□□□□ 0.21
RPAIN-211ENST00000572174 ANKS1AQ92625 1134 aa16.36■□□□□ 0.21
RPAIN-211ENST00000572174 KIFC2Q96AC6 838 aa16.36■□□□□ 0.21
RPAIN-211ENST00000572174 ZNF333Q96JL9 665 aa16.36■□□□□ 0.21
RPAIN-211ENST00000572174 MOV10L1Q9BXT6 1211 aaKnown RBP16.36■□□□□ 0.21
RPAIN-211ENST00000572174 PORCNQ9H237 461 aa16.36■□□□□ 0.21
RPAIN-211ENST00000572174 FBXO28Q9NVF7 368 aa16.36■□□□□ 0.21
RPAIN-211ENST00000572174 ZSWIM5Q9P217 1185 aa16.36■□□□□ 0.21
RPAIN-211ENST00000572174 FBXO40Q9UH90 709 aa16.36■□□□□ 0.21
RPAIN-211ENST00000572174 E7EWF7 191 aa16.35■□□□□ 0.21
RPAIN-211ENST00000572174 CAPN15O75808 1086 aa16.35■□□□□ 0.21
RPAIN-211ENST00000572174 PTPREP23469 700 aa16.35■□□□□ 0.21
RPAIN-211ENST00000572174 MAP2K5Q13163 448 aa16.35■□□□□ 0.21
RPAIN-211ENST00000572174 KRT32Q14532 448 aa16.35■□□□□ 0.21
RPAIN-211ENST00000572174 NCAPG2Q86XI2 1143 aa16.35■□□□□ 0.21
RPAIN-211ENST00000572174 PNMA1Q8ND90 353 aa16.35■□□□□ 0.21
RPAIN-211ENST00000572174 GABRQQ9UN88 632 aa16.35■□□□□ 0.21
RPAIN-211ENST00000572174 PDHBP11177 359 aa16.34■□□□□ 0.21
RPAIN-211ENST00000572174 FCER1AP12319 257 aa16.34■□□□□ 0.21
RPAIN-211ENST00000572174 ERCC3P19447 782 aa16.34■□□□□ 0.21
RPAIN-211ENST00000572174 GRB14Q14449 540 aa16.34■□□□□ 0.21
RPAIN-211ENST00000572174 TMEM132BQ14DG7 1078 aa16.34■□□□□ 0.21
RPAIN-211ENST00000572174 TKFCQ3LXA3 575 aa16.34■□□□□ 0.21
RPAIN-211ENST00000572174 ASPRV1Q53RT3 343 aa16.34■□□□□ 0.21
RPAIN-211ENST00000572174 MORN1Q5T089 497 aa16.34■□□□□ 0.21
RPAIN-211ENST00000572174 ENAHQ8N8S7 591 aaPredicted RBP16.34■□□□□ 0.21
RPAIN-211ENST00000572174 NKX2-3Q8TAU0 364 aa16.34■□□□□ 0.21
RPAIN-211ENST00000572174 ZKSCAN3Q9BRR0 538 aa16.34■□□□□ 0.21
RPAIN-211ENST00000572174 SLC38A10Q9HBR0 1119 aa16.34■□□□□ 0.21
RPAIN-211ENST00000572174 GJD2Q9UKL4 321 aa16.34■□□□□ 0.21
RPAIN-211ENST00000572174 ZNF214Q9UL59 606 aaPredicted RBP16.34■□□□□ 0.21
RPAIN-211ENST00000572174 HTTP42858 3142 aa16.33■□□□□ 0.21
RPAIN-211ENST00000572174 MCM5P33992 734 aa16.33■□□□□ 0.2
RPAIN-211ENST00000572174 ZNF543Q08ER8 600 aa16.33■□□□□ 0.2
RPAIN-211ENST00000572174 KCTD2Q14681 263 aa16.33■□□□□ 0.2
RPAIN-211ENST00000572174 NECTIN1Q15223 517 aa16.33■□□□□ 0.2
RPAIN-211ENST00000572174 CREB3L3Q68CJ9 461 aa16.33■□□□□ 0.2
RPAIN-211ENST00000572174 SNRNP48Q6IEG0 339 aaKnown RBP16.33■□□□□ 0.2
RPAIN-211ENST00000572174 POTEEQ6S8J3 1075 aa16.33■□□□□ 0.2
RPAIN-211ENST00000572174 BTNL9Q6UXG8 535 aa16.33■□□□□ 0.2
RPAIN-211ENST00000572174 KCTD1Q719H9 257 aa16.33■□□□□ 0.2
RPAIN-211ENST00000572174 CHST13Q8NET6 341 aa16.33■□□□□ 0.2
RPAIN-211ENST00000572174 MTMR7Q9Y216 660 aa16.33■□□□□ 0.2
RPAIN-211ENST00000572174 IFIT3O14879 490 aaKnown RBP16.32■□□□□ 0.2
RPAIN-211ENST00000572174 SLC27A2O14975 620 aa16.32■□□□□ 0.2
RPAIN-211ENST00000572174 HMGB1P09429 215 aaKnown RBP16.32■□□□□ 0.2
RPAIN-211ENST00000572174 HOXC6P09630 235 aa16.32■□□□□ 0.2
RPAIN-211ENST00000572174 SNHG28P0DPA3 235 aa16.32■□□□□ 0.2
RPAIN-211ENST00000572174 CYP2B6P20813 491 aa16.32■□□□□ 0.2
RPAIN-211ENST00000572174 WTAPQ15007 396 aa16.32■□□□□ 0.2
RPAIN-211ENST00000572174 DPP9Q86TI2 863 aa16.32■□□□□ 0.2
RPAIN-211ENST00000572174 TMTC2Q8N394 836 aa16.32■□□□□ 0.2
RPAIN-211ENST00000572174 REPS2Q8NFH8 660 aa16.32■□□□□ 0.2
RPAIN-211ENST00000572174 SH3TC2Q8TF17 1288 aa16.32■□□□□ 0.2
RPAIN-211ENST00000572174 USP6NLQ92738 828 aa16.32■□□□□ 0.2
RPAIN-211ENST00000572174 TMEM87BQ96K49 555 aa16.32■□□□□ 0.2
RPAIN-211ENST00000572174 FRMPD3Q5JV73 1810 aa16.31■□□□□ 0.2
RPAIN-211ENST00000572174 WDR19Q8NEZ3 1342 aa16.31■□□□□ 0.2
RPAIN-211ENST00000572174 INHAP05111 366 aa16.31■□□□□ 0.2
RPAIN-211ENST00000572174 PARP1P09874 1014 aaKnown RBP16.31■□□□□ 0.2
RPAIN-211ENST00000572174 SYDE2Q5VT97 1194 aa16.31■□□□□ 0.2
RPAIN-211ENST00000572174 MFSD14CQ5VZR4 134 aa16.31■□□□□ 0.2
RPAIN-211ENST00000572174 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.31■□□□□ 0.2
RPAIN-211ENST00000572174 MMP19Q99542 508 aa16.31■□□□□ 0.2
RPAIN-211ENST00000572174 PFASO15067 1338 aa16.3■□□□□ 0.2
RPAIN-211ENST00000572174 PEX10O60683 326 aa16.3■□□□□ 0.2
RPAIN-211ENST00000572174 ELNP15502 786 aa16.3■□□□□ 0.2
RPAIN-211ENST00000572174 ADORA2AP29274 412 aa16.3■□□□□ 0.2
RPAIN-211ENST00000572174 SEC23AQ15436 765 aa16.3■□□□□ 0.2
RPAIN-211ENST00000572174 TSGA10IPQ3SY00 556 aa16.3■□□□□ 0.2
RPAIN-211ENST00000572174 TMEM67Q5HYA8 995 aa16.3■□□□□ 0.2
RPAIN-211ENST00000572174 CYB5R4Q7L1T6 521 aa16.3■□□□□ 0.2
RPAIN-211ENST00000572174 MB21D2Q8IYB1 491 aaPredicted RBP16.3■□□□□ 0.2
RPAIN-211ENST00000572174 CPXCR1Q8N123 301 aa16.3■□□□□ 0.2
RPAIN-211ENST00000572174 ACAD9Q9H845 621 aa16.3■□□□□ 0.2
RPAIN-211ENST00000572174 PRR12Q9ULL5 1215 aa16.3■□□□□ 0.2
RPAIN-211ENST00000572174 DIS3Q9Y2L1 958 aaKnown RBP16.3■□□□□ 0.2
RPAIN-211ENST00000572174 SMCHD1A6NHR9 2005 aa16.29■□□□□ 0.2
RPAIN-211ENST00000572174 MCM3APO60318 1980 aa16.29■□□□□ 0.2
RPAIN-211ENST00000572174 RPTORQ8N122 1335 aa16.29■□□□□ 0.2
RPAIN-211ENST00000572174 ICAM1P05362 532 aa16.29■□□□□ 0.2
RPAIN-211ENST00000572174 TRAF1Q13077 416 aa16.29■□□□□ 0.2
RPAIN-211ENST00000572174 OLFML2BQ68BL8 750 aa16.29■□□□□ 0.2
RPAIN-211ENST00000572174 CATIPQ7Z7H3 387 aa16.29■□□□□ 0.2
RPAIN-211ENST00000572174 RNF208Q9H0X6 261 aa16.29■□□□□ 0.2
RPAIN-211ENST00000572174 RANBP17Q9H2T7 1088 aaKnown RBP16.29■□□□□ 0.2
RPAIN-211ENST00000572174 RAVER2Q9HCJ3 691 aaKnown RBP16.29■□□□□ 0.2
RPAIN-211ENST00000572174 FRMPD2Q68DX3 1309 aaPredicted RBP16.28■□□□□ 0.2
RPAIN-211ENST00000572174 DDAH1O94760 285 aa16.28■□□□□ 0.2
RPAIN-211ENST00000572174 CALM1P0DP23 149 aa16.28■□□□□ 0.2
RPAIN-211ENST00000572174 CALM2P0DP24 149 aa16.28■□□□□ 0.2
RPAIN-211ENST00000572174 CALM3P0DP25 149 aa16.28■□□□□ 0.2
RPAIN-211ENST00000572174 CCL5P13501 91 aa16.28■□□□□ 0.2
RPAIN-211ENST00000572174 STOX1Q6ZVD7 989 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms