RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 MCM9Q9NXL9 1143 aa16.21■□□□□ 0.19
RPAIN-209ENST00000571558 TACC3Q9Y6A5 838 aa16.21■□□□□ 0.19
RPAIN-209ENST00000571558 FRMPD3Q5JV73 1810 aa16.21■□□□□ 0.19
RPAIN-209ENST00000571558 SEPT4O43236 478 aa16.2■□□□□ 0.18
RPAIN-209ENST00000571558 GH2P01242 217 aa16.2■□□□□ 0.18
RPAIN-209ENST00000571558 CYP2D6P10635 497 aa16.2■□□□□ 0.18
RPAIN-209ENST00000571558 FOSL2P15408 326 aa16.2■□□□□ 0.18
RPAIN-209ENST00000571558 CYP2C19P33261 490 aa16.2■□□□□ 0.18
RPAIN-209ENST00000571558 HAND2P61296 217 aa16.2■□□□□ 0.18
RPAIN-209ENST00000571558 PPARAQ07869 468 aa16.2■□□□□ 0.18
RPAIN-209ENST00000571558 ADCK5Q3MIX3 580 aa16.2■□□□□ 0.18
RPAIN-209ENST00000571558 C9orf50Q5SZB4 431 aa16.2■□□□□ 0.18
RPAIN-209ENST00000571558 C12orf60Q5U649 245 aa16.2■□□□□ 0.18
RPAIN-209ENST00000571558 EHD4Q9H223 541 aa16.2■□□□□ 0.18
RPAIN-209ENST00000571558 SLC5A4Q9NY91 659 aa16.2■□□□□ 0.18
RPAIN-209ENST00000571558 SAP30BPQ9UHR5 308 aaKnown RBP16.2■□□□□ 0.18
RPAIN-209ENST00000571558 ROBO3Q96MS0 1386 aa16.2■□□□□ 0.18
RPAIN-209ENST00000571558 SIPA1L1O43166 1804 aa16.2■□□□□ 0.18
RPAIN-209ENST00000571558 BAZ2AQ9UIF9 1905 aaKnown RBP16.2■□□□□ 0.18
RPAIN-209ENST00000571558 LTBP2Q14767 1821 aa16.2■□□□□ 0.18
RPAIN-209ENST00000571558 COL9A3Q14050 684 aaPredicted RBP16.19■□□□□ 0.18
RPAIN-209ENST00000571558 DPP9Q86TI2 863 aa16.19■□□□□ 0.18
RPAIN-209ENST00000571558 MYLIPQ8WY64 445 aa16.19■□□□□ 0.18
RPAIN-209ENST00000571558 BADQ92934 168 aa16.19■□□□□ 0.18
RPAIN-209ENST00000571558 TTYH1Q9H313 450 aaPredicted RBP16.19■□□□□ 0.18
RPAIN-209ENST00000571558 E7EWF7 191 aa16.19■□□□□ 0.18
RPAIN-209ENST00000571558 FGRP09769 529 aa16.19■□□□□ 0.18
RPAIN-209ENST00000571558 VCAM1P19320 739 aa16.19■□□□□ 0.18
RPAIN-209ENST00000571558 PLCD1P51178 756 aa16.19■□□□□ 0.18
RPAIN-209ENST00000571558 CTDSPL2Q05D32 466 aa16.19■□□□□ 0.18
RPAIN-209ENST00000571558 SHROOM1Q2M3G4 852 aaPredicted RBP16.19■□□□□ 0.18
RPAIN-209ENST00000571558 GJC2Q5T442 439 aaPredicted RBP16.19■□□□□ 0.18
RPAIN-209ENST00000571558 TRPV1Q8NER1 839 aa16.19■□□□□ 0.18
RPAIN-209ENST00000571558 NPLOC4Q8TAT6 608 aa16.19■□□□□ 0.18
RPAIN-209ENST00000571558 TM6SF1Q9BZW5 370 aa16.19■□□□□ 0.18
RPAIN-209ENST00000571558 PRDM5Q9NQX1 630 aaPredicted RBP16.19■□□□□ 0.18
RPAIN-209ENST00000571558 PDLIM7Q9NR12 457 aa16.19■□□□□ 0.18
RPAIN-209ENST00000571558 HOXC10Q9NYD6 342 aa16.19■□□□□ 0.18
RPAIN-209ENST00000571558 BTBD7Q9P203 1132 aa16.19■□□□□ 0.18
RPAIN-209ENST00000571558 SERPINB13Q9UIV8 391 aa16.19■□□□□ 0.18
RPAIN-209ENST00000571558 MINDY4BA8MYZ0 360 aa16.18■□□□□ 0.18
RPAIN-209ENST00000571558 KRT32Q14532 448 aa16.18■□□□□ 0.18
RPAIN-209ENST00000571558 TJAP1Q5JTD0 557 aa16.18■□□□□ 0.18
RPAIN-209ENST00000571558 TTC6Q86TZ1 520 aa16.18■□□□□ 0.18
RPAIN-209ENST00000571558 SHCBP1Q8NEM2 672 aa16.18■□□□□ 0.18
RPAIN-209ENST00000571558 STAG1Q8WVM7 1258 aa16.18■□□□□ 0.18
RPAIN-209ENST00000571558 CABP5Q9NP86 173 aa16.18■□□□□ 0.18
RPAIN-209ENST00000571558 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.18■□□□□ 0.18
RPAIN-209ENST00000571558 SPDYE16A6NNV3 312 aaPredicted RBP16.17■□□□□ 0.18
RPAIN-209ENST00000571558 TRIM60Q495X7 471 aa16.17■□□□□ 0.18
RPAIN-209ENST00000571558 AKNAD1Q5T1N1 836 aa16.17■□□□□ 0.18
RPAIN-209ENST00000571558 ABRAQ8N0Z2 381 aa16.17■□□□□ 0.18
RPAIN-209ENST00000571558 ZSWIM6Q9HCJ5 1215 aa16.17■□□□□ 0.18
RPAIN-209ENST00000571558 INCENPQ9NQS7 918 aa16.17■□□□□ 0.18
RPAIN-209ENST00000571558 NRBP1Q9UHY1 535 aa16.17■□□□□ 0.18
RPAIN-209ENST00000571558 CDH23Q9H251 3354 aa16.17■□□□□ 0.18
RPAIN-209ENST00000571558 MYH1P12882 1939 aa16.17■□□□□ 0.18
RPAIN-209ENST00000571558 RLFQ13129 1914 aa16.16■□□□□ 0.18
RPAIN-209ENST00000571558 NEDD4P46934 1319 aa16.16■□□□□ 0.18
RPAIN-209ENST00000571558 MUC3AQ02505 3323 aa16.16■□□□□ 0.18
RPAIN-209ENST00000571558 POLR3DP05423 398 aaPredicted RBP16.16■□□□□ 0.18
RPAIN-209ENST00000571558 ADORA2AP29274 412 aa16.16■□□□□ 0.18
RPAIN-209ENST00000571558 GABPAQ06546 454 aa16.16■□□□□ 0.18
RPAIN-209ENST00000571558 COG2Q14746 738 aa16.16■□□□□ 0.18
RPAIN-209ENST00000571558 RAB3GAP1Q15042 981 aa16.16■□□□□ 0.18
RPAIN-209ENST00000571558 ZYXQ15942 572 aaKnown RBP16.16■□□□□ 0.18
RPAIN-209ENST00000571558 ABCB5Q2M3G0 1257 aa16.16■□□□□ 0.18
RPAIN-209ENST00000571558 CERKLQ49MI3 558 aaPredicted RBP16.16■□□□□ 0.18
RPAIN-209ENST00000571558 MB21D1Q8N884 522 aa16.16■□□□□ 0.18
RPAIN-209ENST00000571558 JAKMIP1Q96N16 626 aaKnown RBP16.16■□□□□ 0.18
RPAIN-209ENST00000571558 RBM19Q9Y4C8 960 aaKnown RBP16.16■□□□□ 0.18
RPAIN-209ENST00000571558 ZNF236Q9UL36 1845 aa16.15■□□□□ 0.18
RPAIN-209ENST00000571558 TRIM43BA6NCK2 446 aa16.15■□□□□ 0.18
RPAIN-209ENST00000571558 TNFRSF10AO00220 468 aa16.15■□□□□ 0.18
RPAIN-209ENST00000571558 ORC4O43929 436 aa16.15■□□□□ 0.18
RPAIN-209ENST00000571558 PCP11498 1178 aaKnown RBP16.15■□□□□ 0.18
RPAIN-209ENST00000571558 ADCYAP1R1P41586 468 aa16.15■□□□□ 0.18
RPAIN-209ENST00000571558 RABEP1Q15276 862 aa16.15■□□□□ 0.18
RPAIN-209ENST00000571558 C16orf86Q6ZW13 317 aa16.15■□□□□ 0.18
RPAIN-209ENST00000571558 AMOTL1Q8IY63 956 aa16.15■□□□□ 0.18
RPAIN-209ENST00000571558 TRIM43Q96BQ3 446 aaPredicted RBP16.15■□□□□ 0.18
RPAIN-209ENST00000571558 RNPC3Q96LT9 517 aaKnown RBP16.15■□□□□ 0.18
RPAIN-209ENST00000571558 MOV10L1Q9BXT6 1211 aaKnown RBP16.15■□□□□ 0.18
RPAIN-209ENST00000571558 MROH8Q9H579 483 aa16.15■□□□□ 0.18
RPAIN-209ENST00000571558 RPAP3Q9H6T3 665 aaPredicted RBP16.15■□□□□ 0.18
RPAIN-209ENST00000571558 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.14■□□□□ 0.17
RPAIN-209ENST00000571558 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.14■□□□□ 0.17
RPAIN-209ENST00000571558 TLE2Q04725 743 aa16.14■□□□□ 0.17
RPAIN-209ENST00000571558 LRRC41Q15345 812 aa16.14■□□□□ 0.17
RPAIN-209ENST00000571558 MFSD6Q6ZSS7 791 aa16.14■□□□□ 0.17
RPAIN-209ENST00000571558 MB21D2Q8IYB1 491 aaPredicted RBP16.14■□□□□ 0.17
RPAIN-209ENST00000571558 DYNLL2Q96FJ2 89 aa16.14■□□□□ 0.17
RPAIN-209ENST00000571558 NEK1Q96PY6 1258 aa16.14■□□□□ 0.17
RPAIN-209ENST00000571558 UPF3BQ9BZI7 483 aaKnown RBP16.14■□□□□ 0.17
RPAIN-209ENST00000571558 SPATC1LQ9H0A9 340 aa16.14■□□□□ 0.17
RPAIN-209ENST00000571558 RNF41Q9H4P4 317 aaPredicted RBP16.14■□□□□ 0.17
RPAIN-209ENST00000571558 KIAA0355O15063 1070 aa16.13■□□□□ 0.17
RPAIN-209ENST00000571558 CLTBP09497 229 aa16.13■□□□□ 0.17
RPAIN-209ENST00000571558 CPA1P15085 419 aa16.13■□□□□ 0.17
RPAIN-209ENST00000571558 CASTP20810 708 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms