RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 C1orf53Q5VUE5 145 aa17.63■□□□□ 0.41
NDE1-203ENST00000570727 SNRNP48Q6IEG0 339 aaKnown RBP17.63■□□□□ 0.41
NDE1-203ENST00000570727 SLC17A8Q8NDX2 589 aa17.63■□□□□ 0.41
NDE1-203ENST00000570727 XPNPEP3Q9NQH7 507 aa17.63■□□□□ 0.41
NDE1-203ENST00000570727 PHF24Q9UPV7 400 aa17.63■□□□□ 0.41
NDE1-203ENST00000570727 POTEB2H3BUK9 544 aa17.62■□□□□ 0.41
NDE1-203ENST00000570727 ERC2O15083 957 aa17.62■□□□□ 0.41
NDE1-203ENST00000570727 SNAI1O95863 264 aaPredicted RBP17.62■□□□□ 0.41
NDE1-203ENST00000570727 PGK1P00558 417 aa17.62■□□□□ 0.41
NDE1-203ENST00000570727 RARBP10826 455 aa17.62■□□□□ 0.41
NDE1-203ENST00000570727 LRRFIP1Q32MZ4 808 aaKnown RBP17.62■□□□□ 0.41
NDE1-203ENST00000570727 SH3RF1Q7Z6J0 888 aa17.62■□□□□ 0.41
NDE1-203ENST00000570727 CPXCR1Q8N123 301 aa17.62■□□□□ 0.41
NDE1-203ENST00000570727 NEDD1Q8NHV4 660 aa17.62■□□□□ 0.41
NDE1-203ENST00000570727 SLC38A10Q9HBR0 1119 aa17.62■□□□□ 0.41
NDE1-203ENST00000570727 ZNF287Q9HBT7 754 aa17.62■□□□□ 0.41
NDE1-203ENST00000570727 PRKAG2Q9UGJ0 569 aa17.62■□□□□ 0.41
NDE1-203ENST00000570727 TRIM43BA6NCK2 446 aa17.61■□□□□ 0.41
NDE1-203ENST00000570727 FOXP2O15409 715 aa17.61■□□□□ 0.41
NDE1-203ENST00000570727 ZBED4O75132 1171 aa17.61■□□□□ 0.41
NDE1-203ENST00000570727 TTLL1O95922 423 aa17.61■□□□□ 0.41
NDE1-203ENST00000570727 MAMDC4Q6UXC1 1216 aa17.61■□□□□ 0.41
NDE1-203ENST00000570727 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.61■□□□□ 0.41
NDE1-203ENST00000570727 GMCL1P1Q8NEA9 526 aa17.61■□□□□ 0.41
NDE1-203ENST00000570727 KIFC2Q96AC6 838 aa17.61■□□□□ 0.41
NDE1-203ENST00000570727 TRIM43Q96BQ3 446 aaPredicted RBP17.61■□□□□ 0.41
NDE1-203ENST00000570727 LENG1Q96BZ8 264 aaPredicted RBP17.61■□□□□ 0.41
NDE1-203ENST00000570727 DDX11Q96FC9 970 aa17.61■□□□□ 0.41
NDE1-203ENST00000570727 NACAP1Q9BZK3 213 aa17.61■□□□□ 0.41
NDE1-203ENST00000570727 RAVER2Q9HCJ3 691 aaKnown RBP17.61■□□□□ 0.41
NDE1-203ENST00000570727 PDLIM7Q9NR12 457 aa17.61■□□□□ 0.41
NDE1-203ENST00000570727 FEM1BQ9UK73 627 aa17.61■□□□□ 0.41
NDE1-203ENST00000570727 SYNPO2Q9UMS6 1093 aa17.61■□□□□ 0.41
NDE1-203ENST00000570727 SALL3Q9BXA9 1300 aa17.61■□□□□ 0.41
NDE1-203ENST00000570727 MCM3APO60318 1980 aa17.6■□□□□ 0.41
NDE1-203ENST00000570727 AKR1A1P14550 325 aa17.6■□□□□ 0.41
NDE1-203ENST00000570727 SLC4A3P48751 1232 aa17.6■□□□□ 0.41
NDE1-203ENST00000570727 TFAP4Q01664 338 aa17.6■□□□□ 0.41
NDE1-203ENST00000570727 TLE2Q04725 743 aa17.6■□□□□ 0.41
NDE1-203ENST00000570727 RNF180Q86T96 592 aa17.6■□□□□ 0.41
NDE1-203ENST00000570727 LRRC47Q8N1G4 583 aaKnown RBP17.6■□□□□ 0.41
NDE1-203ENST00000570727 MSL3Q8N5Y2 521 aaKnown RBP17.6■□□□□ 0.41
NDE1-203ENST00000570727 BADQ92934 168 aa17.6■□□□□ 0.41
NDE1-203ENST00000570727 FSD1Q9BTV5 496 aa17.6■□□□□ 0.41
NDE1-203ENST00000570727 STXBP5LQ9Y2K9 1186 aa17.6■□□□□ 0.41
NDE1-203ENST00000570727 UNC80Q8N2C7 3258 aa17.6■□□□□ 0.41
NDE1-203ENST00000570727 PLIN4Q96Q06 1357 aa17.59■□□□□ 0.41
NDE1-203ENST00000570727 SYNGAP1Q96PV0 1343 aa17.59■□□□□ 0.41
NDE1-203ENST00000570727 ADAMTS4O75173 837 aa17.59■□□□□ 0.41
NDE1-203ENST00000570727 TSPY3P0CV98 308 aa17.59■□□□□ 0.41
NDE1-203ENST00000570727 TSPY8P0CW00 308 aa17.59■□□□□ 0.41
NDE1-203ENST00000570727 MX1P20591 662 aa17.59■□□□□ 0.41
NDE1-203ENST00000570727 PDE4BQ07343 736 aa17.59■□□□□ 0.41
NDE1-203ENST00000570727 PPARAQ07869 468 aa17.59■□□□□ 0.41
NDE1-203ENST00000570727 SHHQ15465 462 aa17.59■□□□□ 0.41
NDE1-203ENST00000570727 SLFN13Q68D06 897 aa17.59■□□□□ 0.41
NDE1-203ENST00000570727 ZNF467Q7Z7K2 595 aaPredicted RBP17.59■□□□□ 0.41
NDE1-203ENST00000570727 FGD4Q96M96 766 aa17.59■□□□□ 0.41
NDE1-203ENST00000570727 NAPBQ9H115 298 aa17.59■□□□□ 0.41
NDE1-203ENST00000570727 INCENPQ9NQS7 918 aa17.59■□□□□ 0.41
NDE1-203ENST00000570727 PRDM5Q9NQX1 630 aaPredicted RBP17.59■□□□□ 0.41
NDE1-203ENST00000570727 CNPY2Q9Y2B0 182 aa17.59■□□□□ 0.41
NDE1-203ENST00000570727 BMP3P12645 472 aa17.58■□□□□ 0.4
NDE1-203ENST00000570727 ITGB8P26012 769 aa17.58■□□□□ 0.4
NDE1-203ENST00000570727 C9orf50Q5SZB4 431 aa17.58■□□□□ 0.4
NDE1-203ENST00000570727 FAM109BQ6ICB4 259 aaPredicted RBP17.58■□□□□ 0.4
NDE1-203ENST00000570727 CCDC129Q6ZRS4 1044 aa17.58■□□□□ 0.4
NDE1-203ENST00000570727 KLHDC9Q8NEP7 349 aa17.58■□□□□ 0.4
NDE1-203ENST00000570727 FAM184BQ9ULE4 1060 aa17.58■□□□□ 0.4
NDE1-203ENST00000570727 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.58■□□□□ 0.46e-6■■□□□ 13.9
NDE1-203ENST00000570727 TACC3Q9Y6A5 838 aa17.58■□□□□ 0.4
NDE1-203ENST00000570727 EYSQ5T1H1 3165 aa17.57■□□□□ 0.4
NDE1-203ENST00000570727 A0A1W2PQ45 241 aaPredicted RBP17.57■□□□□ 0.4
NDE1-203ENST00000570727 A0A1W2PQY0 241 aa17.57■□□□□ 0.4
NDE1-203ENST00000570727 TMEM232C9JQI7 657 aa17.57■□□□□ 0.4
NDE1-203ENST00000570727 OAZ1P54368 228 aa17.57■□□□□ 0.4
NDE1-203ENST00000570727 CCSAPQ6IQ19 270 aaPredicted RBP17.57■□□□□ 0.4
NDE1-203ENST00000570727 CHST13Q8NET6 341 aa17.57■□□□□ 0.4
NDE1-203ENST00000570727 TSEN34Q9BSV6 310 aaKnown RBP17.57■□□□□ 0.4
NDE1-203ENST00000570727 CTDP1Q9Y5B0 961 aaPredicted RBP17.57■□□□□ 0.4
NDE1-203ENST00000570727 SYNRGQ9UMZ2 1314 aa17.56■□□□□ 0.4
NDE1-203ENST00000570727 ADCY6O43306 1168 aa17.56■□□□□ 0.4
NDE1-203ENST00000570727 SLC3A2P08195 630 aaKnown RBP17.56■□□□□ 0.4
NDE1-203ENST00000570727 RRP1P56182 461 aaKnown RBP17.56■□□□□ 0.4
NDE1-203ENST00000570727 IRX5P78411 483 aaPredicted RBP17.56■□□□□ 0.4
NDE1-203ENST00000570727 CTDSPL2Q05D32 466 aa17.56■□□□□ 0.4
NDE1-203ENST00000570727 ACVR2BQ13705 512 aa17.56■□□□□ 0.4
NDE1-203ENST00000570727 ANKRD45Q5TZF3 282 aa17.56■□□□□ 0.4
NDE1-203ENST00000570727 ANKRD35Q8N283 1001 aa17.56■□□□□ 0.4
NDE1-203ENST00000570727 GMCL1Q96IK5 515 aa17.56■□□□□ 0.4
NDE1-203ENST00000570727 IL17RBQ9NRM6 502 aa17.56■□□□□ 0.4
NDE1-203ENST00000570727 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.56■□□□□ 0.4
NDE1-203ENST00000570727 FBXO40Q9UH90 709 aa17.56■□□□□ 0.4
NDE1-203ENST00000570727 ZNF536O15090 1300 aa17.55■□□□□ 0.4
NDE1-203ENST00000570727 KIAA0355O15063 1070 aa17.55■□□□□ 0.4
NDE1-203ENST00000570727 DUSP11O75319 330 aaKnown RBP17.55■□□□□ 0.4
NDE1-203ENST00000570727 CLTBP09497 229 aa17.55■□□□□ 0.4
NDE1-203ENST00000570727 FDX1P10109 184 aa17.55■□□□□ 0.4
NDE1-203ENST00000570727 MCCP23508 829 aa17.55■□□□□ 0.4
NDE1-203ENST00000570727 ACLYP53396 1101 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms