RNA–Protein interactions for RNA: ENST00000570668.1

SMG6-206, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-206ENST00000570668 ABRAQ8N0Z2 381 aa13.13□□□□□ -0.31
SMG6-206ENST00000570668 CHURC1Q8WUH1 139 aa13.13□□□□□ -0.31
SMG6-206ENST00000570668 KIFC2Q96AC6 838 aa13.13□□□□□ -0.31
SMG6-206ENST00000570668 TEX13BQ9BXU2 312 aa13.13□□□□□ -0.31
SMG6-206ENST00000570668 CNNM2Q9H8M5 875 aa13.13□□□□□ -0.31
SMG6-206ENST00000570668 SLC38A10Q9HBR0 1119 aa13.13□□□□□ -0.31
SMG6-206ENST00000570668 U3KPZ7 1027 aaPredicted RBP13.13□□□□□ -0.31
SMG6-206ENST00000570668 ZNF236Q9UL36 1845 aa13.12□□□□□ -0.31
SMG6-206ENST00000570668 B4E1Z4 1266 aa13.12□□□□□ -0.31
SMG6-206ENST00000570668 TMEM232C9JQI7 657 aa13.12□□□□□ -0.31
SMG6-206ENST00000570668 ZBED4O75132 1171 aa13.12□□□□□ -0.31
SMG6-206ENST00000570668 KDM4AO75164 1064 aa13.12□□□□□ -0.31
SMG6-206ENST00000570668 CENPBP07199 599 aaPredicted RBP13.12□□□□□ -0.31
SMG6-206ENST00000570668 ZKSCAN1P17029 563 aaPredicted RBP13.12□□□□□ -0.31
SMG6-206ENST00000570668 ADORA2AP29274 412 aa13.12□□□□□ -0.31
SMG6-206ENST00000570668 STAT2P52630 851 aa13.12□□□□□ -0.31
SMG6-206ENST00000570668 TRIM32Q13049 653 aa13.12□□□□□ -0.31
SMG6-206ENST00000570668 CCL14Q16627 93 aa13.12□□□□□ -0.31
SMG6-206ENST00000570668 CCDC178Q5BJE1 867 aa13.12□□□□□ -0.31
SMG6-206ENST00000570668 MAP3K21Q5TCX8 1036 aa13.12□□□□□ -0.31
SMG6-206ENST00000570668 FAM160B2Q86V87 743 aa13.12□□□□□ -0.31
SMG6-206ENST00000570668 IQCA1Q86XH1 822 aa13.12□□□□□ -0.31
SMG6-206ENST00000570668 DGKHQ86XP1 1220 aa13.12□□□□□ -0.31
SMG6-206ENST00000570668 DCAF4Q8WV16 495 aa13.12□□□□□ -0.31
SMG6-206ENST00000570668 MAP4K1Q92918 833 aa13.12□□□□□ -0.31
SMG6-206ENST00000570668 KRT23Q9C075 422 aa13.12□□□□□ -0.31
SMG6-206ENST00000570668 PAK6Q9NQU5 681 aaPredicted RBP13.12□□□□□ -0.31
SMG6-206ENST00000570668 ZSWIM5Q9P217 1185 aa13.12□□□□□ -0.31
SMG6-206ENST00000570668 RPTORQ8N122 1335 aa13.12□□□□□ -0.31
SMG6-206ENST00000570668 IGHA2P01877 340 aa13.11□□□□□ -0.31
SMG6-206ENST00000570668 CYP21A2P08686 494 aa13.11□□□□□ -0.31
SMG6-206ENST00000570668 FCER1AP12319 257 aa13.11□□□□□ -0.31
SMG6-206ENST00000570668 CAPN2P17655 700 aa13.11□□□□□ -0.31
SMG6-206ENST00000570668 OAZ1P54368 228 aa13.11□□□□□ -0.31
SMG6-206ENST00000570668 ERICH6BQ5W0A0 696 aa13.11□□□□□ -0.31
SMG6-206ENST00000570668 KCTD1Q719H9 257 aa13.11□□□□□ -0.31
SMG6-206ENST00000570668 DPP9Q86TI2 863 aa13.11□□□□□ -0.31
SMG6-206ENST00000570668 NPLOC4Q8TAT6 608 aa13.11□□□□□ -0.31
SMG6-206ENST00000570668 U2AF1L4Q8WU68 220 aaKnown RBP13.11□□□□□ -0.31
SMG6-206ENST00000570668 ANKS1AQ92625 1134 aa13.11□□□□□ -0.31
SMG6-206ENST00000570668 SHISA4Q96DD7 197 aa13.11□□□□□ -0.31
SMG6-206ENST00000570668 ZKSCAN3Q9BRR0 538 aa13.11□□□□□ -0.31
SMG6-206ENST00000570668 ESYT1Q9BSJ8 1104 aa13.11□□□□□ -0.31
SMG6-206ENST00000570668 HMX1Q9NP08 348 aaPredicted RBP13.11□□□□□ -0.31
SMG6-206ENST00000570668 COBLO75128 1261 aa13.1□□□□□ -0.31
SMG6-206ENST00000570668 SGPL1O95470 568 aa13.1□□□□□ -0.31
SMG6-206ENST00000570668 SNHG28P0DPA3 235 aa13.1□□□□□ -0.31
SMG6-206ENST00000570668 PDHBP11177 359 aa13.1□□□□□ -0.31
SMG6-206ENST00000570668 PRKAR2AP13861 404 aaKnown RBP13.1□□□□□ -0.31
SMG6-206ENST00000570668 SNRNP48Q6IEG0 339 aaKnown RBP13.1□□□□□ -0.31
SMG6-206ENST00000570668 BTNL9Q6UXG8 535 aa13.1□□□□□ -0.31
SMG6-206ENST00000570668 RASGRP2Q7LDG7 609 aa13.1□□□□□ -0.31
SMG6-206ENST00000570668 CPXCR1Q8N123 301 aa13.1□□□□□ -0.31
SMG6-206ENST00000570668 CHMP4CQ96CF2 233 aa13.1□□□□□ -0.31
SMG6-206ENST00000570668 DEFB118Q96PH6 123 aa13.1□□□□□ -0.31
SMG6-206ENST00000570668 ZSCAN10Q96SZ4 725 aaPredicted RBP13.1□□□□□ -0.31
SMG6-206ENST00000570668 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.1□□□□□ -0.31
SMG6-206ENST00000570668 RAVER2Q9HCJ3 691 aaKnown RBP13.1□□□□□ -0.31
SMG6-206ENST00000570668 SLC5A4Q9NY91 659 aa13.1□□□□□ -0.31
SMG6-206ENST00000570668 FLRT1Q9NZU1 646 aa13.1□□□□□ -0.31
SMG6-206ENST00000570668 ISY1Q9ULR0 285 aaKnown RBP13.1□□□□□ -0.31
SMG6-206ENST00000570668 MTMR7Q9Y216 660 aa13.1□□□□□ -0.31
SMG6-206ENST00000570668 RIPK3Q9Y572 518 aa13.1□□□□□ -0.31
SMG6-206ENST00000570668 CTDP1Q9Y5B0 961 aaPredicted RBP13.1□□□□□ -0.31
SMG6-206ENST00000570668 ZNFX1Q9P2E3 1918 aaKnown RBP13.09□□□□□ -0.31
SMG6-206ENST00000570668 CACNB2Q08289 660 aaPredicted RBP13.09□□□□□ -0.31
SMG6-206ENST00000570668 TRDNQ13061 729 aa13.09□□□□□ -0.31
SMG6-206ENST00000570668 IKQ13123 557 aaPredicted RBP13.09□□□□□ -0.31
SMG6-206ENST00000570668 KCTD2Q14681 263 aa13.09□□□□□ -0.31
SMG6-206ENST00000570668 CCDC96Q2M329 555 aa13.09□□□□□ -0.31
SMG6-206ENST00000570668 MFSD14CQ5VZR4 134 aa13.09□□□□□ -0.31
SMG6-206ENST00000570668 OLFML2BQ68BL8 750 aa13.09□□□□□ -0.31
SMG6-206ENST00000570668 KIAA1211Q6ZU35 1233 aa13.09□□□□□ -0.31
SMG6-206ENST00000570668 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.09□□□□□ -0.31
SMG6-206ENST00000570668 ENAHQ8N8S7 591 aaPredicted RBP13.09□□□□□ -0.31
SMG6-206ENST00000570668 MMP19Q99542 508 aa13.09□□□□□ -0.31
SMG6-206ENST00000570668 LSG1Q9H089 658 aaKnown RBP13.09□□□□□ -0.31
SMG6-206ENST00000570668 CRISPLD2Q9H0B8 497 aa13.09□□□□□ -0.31
SMG6-206ENST00000570668 PRR12Q9ULL5 1215 aa13.09□□□□□ -0.31
SMG6-206ENST00000570668 RBM8AQ9Y5S9 174 aaKnown RBP13.09□□□□□ -0.31
SMG6-206ENST00000570668 ZNF536O15090 1300 aa13.09□□□□□ -0.31
SMG6-206ENST00000570668 ZNF543Q08ER8 600 aa13.08□□□□□ -0.32
SMG6-206ENST00000570668 TTBK2Q6IQ55 1244 aa13.08□□□□□ -0.32
SMG6-206ENST00000570668 CHST13Q8NET6 341 aa13.08□□□□□ -0.32
SMG6-206ENST00000570668 UBAC1Q9BSL1 405 aa13.08□□□□□ -0.32
SMG6-206ENST00000570668 FBXO40Q9UH90 709 aa13.08□□□□□ -0.32
SMG6-206ENST00000570668 DIS3Q9Y2L1 958 aaKnown RBP13.08□□□□□ -0.32
SMG6-206ENST00000570668 TAF6LQ9Y6J9 622 aa13.08□□□□□ -0.32
SMG6-206ENST00000570668 TNKSO95271 1327 aa13.08□□□□□ -0.32
SMG6-206ENST00000570668 E7EWF7 191 aa13.07□□□□□ -0.32
SMG6-206ENST00000570668 CDC45O75419 566 aa13.07□□□□□ -0.32
SMG6-206ENST00000570668 CYP2C19P33261 490 aa13.07□□□□□ -0.32
SMG6-206ENST00000570668 SEC23AQ15436 765 aa13.07□□□□□ -0.32
SMG6-206ENST00000570668 ZNF792Q3KQV3 632 aa13.07□□□□□ -0.32
SMG6-206ENST00000570668 GPATCH4Q5T3I0 446 aaKnown RBP13.07□□□□□ -0.32
SMG6-206ENST00000570668 STOX1Q6ZVD7 989 aa13.07□□□□□ -0.32
SMG6-206ENST00000570668 CYB5R4Q7L1T6 521 aa13.07□□□□□ -0.32
SMG6-206ENST00000570668 UBE2Q1Q7Z7E8 422 aa13.07□□□□□ -0.32
SMG6-206ENST00000570668 PNMA1Q8ND90 353 aa13.07□□□□□ -0.32
SMG6-206ENST00000570668 NCOA7Q8NI08 942 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms