RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 TINF2Q9BSI4 451 aa26.73■■□□□ 1.87
RBFOX1-219ENST00000569895 LNPKQ9C0E8 428 aa26.73■■□□□ 1.87
RBFOX1-219ENST00000569895 TRIM6-TRIM34B2RNG4 842 aa26.72■■□□□ 1.87
RBFOX1-219ENST00000569895 ALX1Q15699 326 aa26.72■■□□□ 1.87
RBFOX1-219ENST00000569895 ANAPC4Q9UJX5 808 aa26.72■■□□□ 1.87
RBFOX1-219ENST00000569895 ISY1Q9ULR0 285 aaKnown RBP26.72■■□□□ 1.87
RBFOX1-219ENST00000569895 SLC4A3P48751 1232 aa26.71■■□□□ 1.87
RBFOX1-219ENST00000569895 OAZ1P54368 228 aa26.71■■□□□ 1.87
RBFOX1-219ENST00000569895 CTDSPL2Q05D32 466 aa26.71■■□□□ 1.87
RBFOX1-219ENST00000569895 GJC2Q5T442 439 aaPredicted RBP26.71■■□□□ 1.87
RBFOX1-219ENST00000569895 SMC5Q8IY18 1101 aa26.71■■□□□ 1.87
RBFOX1-219ENST00000569895 MSL3Q8N5Y2 521 aaKnown RBP26.71■■□□□ 1.87
RBFOX1-219ENST00000569895 CHURC1Q8WUH1 139 aa26.71■■□□□ 1.87
RBFOX1-219ENST00000569895 SLC38A10Q9HBR0 1119 aa26.71■■□□□ 1.87
RBFOX1-219ENST00000569895 FBXO40Q9UH90 709 aa26.71■■□□□ 1.87
RBFOX1-219ENST00000569895 STX8Q9UNK0 236 aa26.71■■□□□ 1.87
RBFOX1-219ENST00000569895 CNPY2Q9Y2B0 182 aa26.71■■□□□ 1.87
RBFOX1-219ENST00000569895 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.71■■□□□ 1.87
RBFOX1-219ENST00000569895 PARP14Q460N5 1801 aa26.7■■□□□ 1.87
RBFOX1-219ENST00000569895 MYCNP04198 464 aaPredicted RBP26.7■■□□□ 1.86
RBFOX1-219ENST00000569895 SLC1A4P43007 532 aa26.7■■□□□ 1.86
RBFOX1-219ENST00000569895 ANO1Q5XXA6 986 aa26.7■■□□□ 1.86
RBFOX1-219ENST00000569895 FAM160B2Q86V87 743 aa26.7■■□□□ 1.86
RBFOX1-219ENST00000569895 TMEM232C9JQI7 657 aa26.69■■□□□ 1.86
RBFOX1-219ENST00000569895 FOXP2O15409 715 aa26.69■■□□□ 1.86
RBFOX1-219ENST00000569895 RANBP6O60518 1105 aaKnown RBP26.69■■□□□ 1.86
RBFOX1-219ENST00000569895 RARBP10826 455 aa26.69■■□□□ 1.86
RBFOX1-219ENST00000569895 MAGEA10P43363 369 aaPredicted RBP26.69■■□□□ 1.86
RBFOX1-219ENST00000569895 STAT2P52630 851 aa26.69■■□□□ 1.86
RBFOX1-219ENST00000569895 VPS53Q5VIR6 699 aa26.69■■□□□ 1.86
RBFOX1-219ENST00000569895 B4GALNT3Q6L9W6 998 aa26.69■■□□□ 1.86
RBFOX1-219ENST00000569895 CHST13Q8NET6 341 aa26.69■■□□□ 1.86
RBFOX1-219ENST00000569895 RILPL2Q969X0 211 aa26.69■■□□□ 1.86
RBFOX1-219ENST00000569895 GMCL1Q96IK5 515 aa26.69■■□□□ 1.86
RBFOX1-219ENST00000569895 RAVER2Q9HCJ3 691 aaKnown RBP26.69■■□□□ 1.86
RBFOX1-219ENST00000569895 RIPK3Q9Y572 518 aa26.69■■□□□ 1.86
RBFOX1-219ENST00000569895 ATN1P54259 1190 aaPredicted RBP26.68■■□□□ 1.86
RBFOX1-219ENST00000569895 IKQ13123 557 aaPredicted RBP26.68■■□□□ 1.86
RBFOX1-219ENST00000569895 CHD1LQ86WJ1 897 aa26.68■■□□□ 1.86
RBFOX1-219ENST00000569895 STAG1Q8WVM7 1258 aa26.68■■□□□ 1.86
RBFOX1-219ENST00000569895 FAM227BQ96M60 508 aa26.68■■□□□ 1.86
RBFOX1-219ENST00000569895 PRKAG2Q9UGJ0 569 aa26.68■■□□□ 1.86
RBFOX1-219ENST00000569895 ALPK3Q96L96 1907 aa26.68■■□□□ 1.86
RBFOX1-219ENST00000569895 ORC4O43929 436 aa26.67■■□□□ 1.86
RBFOX1-219ENST00000569895 MFAP1P55081 439 aaKnown RBP26.67■■□□□ 1.86
RBFOX1-219ENST00000569895 ANKRD35Q8N283 1001 aa26.67■■□□□ 1.86
RBFOX1-219ENST00000569895 TRIOBPQ9H2D6 2365 aa26.66■■□□□ 1.86
RBFOX1-219ENST00000569895 A0A0D9SFI3 127 aa26.66■■□□□ 1.86
RBFOX1-219ENST00000569895 PLA2G6O60733 806 aa26.66■■□□□ 1.86
RBFOX1-219ENST00000569895 FGAP02671 866 aa26.66■■□□□ 1.86
RBFOX1-219ENST00000569895 AKR1A1P14550 325 aa26.66■■□□□ 1.86
RBFOX1-219ENST00000569895 MCCP23508 829 aa26.66■■□□□ 1.86
RBFOX1-219ENST00000569895 LRRC41Q15345 812 aa26.66■■□□□ 1.86
RBFOX1-219ENST00000569895 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.66■■□□□ 1.86
RBFOX1-219ENST00000569895 UBE2OQ9C0C9 1292 aaKnown RBP26.66■■□□□ 1.86
RBFOX1-219ENST00000569895 XPNPEP3Q9NQH7 507 aa26.66■■□□□ 1.86
RBFOX1-219ENST00000569895 INCENPQ9NQS7 918 aa26.66■■□□□ 1.86
RBFOX1-219ENST00000569895 IL17RBQ9NRM6 502 aa26.66■■□□□ 1.86
RBFOX1-219ENST00000569895 TOMM22Q9NS69 142 aa26.66■■□□□ 1.86
RBFOX1-219ENST00000569895 COL11A1P12107 1806 aaPredicted RBP26.66■■□□□ 1.86
RBFOX1-219ENST00000569895 SYNGAP1Q96PV0 1343 aa26.65■■□□□ 1.86
RBFOX1-219ENST00000569895 DNAJC25-GNG10A0A024R161 153 aa26.65■■□□□ 1.86
RBFOX1-219ENST00000569895 FGRP09769 529 aa26.65■■□□□ 1.86
RBFOX1-219ENST00000569895 HSPD1P10809 573 aaKnown RBP26.65■■□□□ 1.86
RBFOX1-219ENST00000569895 NUCB1Q02818 461 aa26.65■■□□□ 1.86
RBFOX1-219ENST00000569895 RCSD1Q6JBY9 416 aa26.65■■□□□ 1.86
RBFOX1-219ENST00000569895 MAMDC4Q6UXC1 1216 aa26.65■■□□□ 1.86
RBFOX1-219ENST00000569895 SLC39A5Q6ZMH5 540 aa26.65■■□□□ 1.86
RBFOX1-219ENST00000569895 ZNF467Q7Z7K2 595 aaPredicted RBP26.65■■□□□ 1.86
RBFOX1-219ENST00000569895 RNF180Q86T96 592 aa26.65■■□□□ 1.86
RBFOX1-219ENST00000569895 LBHD1Q9BQE6 289 aaPredicted RBP26.65■■□□□ 1.86
RBFOX1-219ENST00000569895 RTP1P59025 263 aa26.64■■□□□ 1.86
RBFOX1-219ENST00000569895 NMIQ13287 307 aaPredicted RBP26.64■■□□□ 1.86
RBFOX1-219ENST00000569895 EXOC6Q8TAG9 804 aa26.64■■□□□ 1.86
RBFOX1-219ENST00000569895 OSBPL3Q9H4L5 887 aa26.64■■□□□ 1.86
RBFOX1-219ENST00000569895 MYH4Q9Y623 1939 aa26.64■■□□□ 1.86
RBFOX1-219ENST00000569895 IGHDP01880 384 aa26.63■■□□□ 1.85
RBFOX1-219ENST00000569895 ZNF865P0CJ78 1059 aaPredicted RBP26.63■■□□□ 1.85
RBFOX1-219ENST00000569895 ADCYAP1R1P41586 468 aa26.63■■□□□ 1.85
RBFOX1-219ENST00000569895 TDHQ8IZJ6 230 aa26.63■■□□□ 1.85
RBFOX1-219ENST00000569895 FAM184BQ9ULE4 1060 aa26.63■■□□□ 1.85
RBFOX1-219ENST00000569895 ZMYM6O95789 1325 aa26.63■■□□□ 1.85
RBFOX1-219ENST00000569895 CCDC171Q6TFL3 1326 aa26.63■■□□□ 1.85
RBFOX1-219ENST00000569895 NMT2O60551 498 aa26.62■■□□□ 1.85
RBFOX1-219ENST00000569895 PCP11498 1178 aaKnown RBP26.62■■□□□ 1.85
RBFOX1-219ENST00000569895 TAL1P17542 331 aaPredicted RBP26.62■■□□□ 1.85
RBFOX1-219ENST00000569895 TKFCQ3LXA3 575 aa26.62■■□□□ 1.85
RBFOX1-219ENST00000569895 RRP12Q5JTH9 1297 aaKnown RBP26.62■■□□□ 1.85
RBFOX1-219ENST00000569895 PLEKHM2Q8IWE5 1019 aa26.62■■□□□ 1.85
RBFOX1-219ENST00000569895 ACAD9Q9H845 621 aa26.62■■□□□ 1.85
RBFOX1-219ENST00000569895 ATP11BQ9Y2G3 1177 aa26.62■■□□□ 1.85
RBFOX1-219ENST00000569895 ZNFX1Q9P2E3 1918 aaKnown RBP26.62■■□□□ 1.85
RBFOX1-219ENST00000569895 FRMPD3Q5JV73 1810 aa26.62■■□□□ 1.85
RBFOX1-219ENST00000569895 SDSP20132 328 aa26.61■■□□□ 1.85
RBFOX1-219ENST00000569895 NOVP48745 357 aa26.61■■□□□ 1.85
RBFOX1-219ENST00000569895 KCTD1Q719H9 257 aa26.61■■□□□ 1.85
RBFOX1-219ENST00000569895 DCAF4Q8WV16 495 aa26.61■■□□□ 1.85
RBFOX1-219ENST00000569895 HOMER2Q9NSB8 354 aa26.61■■□□□ 1.85
RBFOX1-219ENST00000569895 TCP11L1Q9NUJ3 509 aa26.61■■□□□ 1.85
RBFOX1-219ENST00000569895 SNAI1O95863 264 aaPredicted RBP26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms